BLASTX nr result

ID: Coptis23_contig00003831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003831
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522480.1| conserved hypothetical protein [Ricinus comm...   165   2e-39
ref|XP_002315033.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-39
ref|XP_003613885.1| DUF246 domain-containing protein [Medicago t...   163   4e-38
gb|AAF79406.1|AC068197_16 F16A14.24 [Arabidopsis thaliana]            161   1e-37
ref|XP_002890036.1| hypothetical protein ARALYDRAFT_471563 [Arab...   161   1e-37

>ref|XP_002522480.1| conserved hypothetical protein [Ricinus communis]
           gi|223538365|gb|EEF39972.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 520

 Score =  165 bits (417), Expect(2) = 2e-39
 Identities = 79/111 (71%), Positives = 92/111 (82%)
 Frame = -2

Query: 668 KNHSSQMAALGFTVSVASNIFIPTYDENMAKLVEGHRRYNGFRKTIEPDRGKLVELIDLY 489
           +NHSSQMAAL F VS+ASN FIPTYD NMAK+VEGHRRY GF+KTI  DR KLVEL+DL+
Sbjct: 379 QNHSSQMAALDFMVSIASNTFIPTYDGNMAKVVEGHRRYLGFKKTILLDRKKLVELLDLH 438

Query: 488 HNKTLSWNEFEVAVRLAHRKRLGMPSPQKVILENPKEEEYFYANPHECLSE 336
            N TL+WN+F VAV+ AH KR+G PS +KVI + PKEE+YFYANP ECL E
Sbjct: 439 QNGTLTWNKFAVAVQAAHEKRMGQPSRRKVIADKPKEEDYFYANPQECLCE 489



 Score = 23.9 bits (50), Expect(2) = 2e-39
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 702 KKEMLLDPGDLQK 664
           +KEMLLDP +LQ+
Sbjct: 365 RKEMLLDPAELQQ 377


>ref|XP_002315033.1| predicted protein [Populus trichocarpa] gi|222864073|gb|EEF01204.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  162 bits (409), Expect(2) = 3e-39
 Identities = 77/111 (69%), Positives = 91/111 (81%)
 Frame = -2

Query: 668 KNHSSQMAALGFTVSVASNIFIPTYDENMAKLVEGHRRYNGFRKTIEPDRGKLVELIDLY 489
           +NHSSQMAAL F VS+AS+ FIPTYD NMAK+VEGHRRY GF+KTI  DR +LVEL+DL+
Sbjct: 378 QNHSSQMAALDFMVSIASDTFIPTYDGNMAKVVEGHRRYRGFKKTILLDRKRLVELLDLH 437

Query: 488 HNKTLSWNEFEVAVRLAHRKRLGMPSPQKVILENPKEEEYFYANPHECLSE 336
            N TLSWNEF VAV  AH KR+G P+ ++VI + PKEE+YFYANP ECL E
Sbjct: 438 QNGTLSWNEFAVAVGSAHEKRMGQPTRRRVIADKPKEEDYFYANPQECLCE 488



 Score = 26.2 bits (56), Expect(2) = 3e-39
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -1

Query: 702 KKEMLLDPGDLQK 664
           +KEMLLDPG+LQ+
Sbjct: 364 RKEMLLDPGELQQ 376


>ref|XP_003613885.1| DUF246 domain-containing protein [Medicago truncatula]
           gi|355515220|gb|AES96843.1| DUF246 domain-containing
           protein [Medicago truncatula]
          Length = 494

 Score =  163 bits (412), Expect = 4e-38
 Identities = 76/111 (68%), Positives = 91/111 (81%)
 Frame = -2

Query: 668 KNHSSQMAALGFTVSVASNIFIPTYDENMAKLVEGHRRYNGFRKTIEPDRGKLVELIDLY 489
           +NHSSQMAAL F VSVAS+ FIPTYD NMAKLVEGHRRY+ FRKTI  DR K+VEL+D++
Sbjct: 368 QNHSSQMAALDFMVSVASDTFIPTYDGNMAKLVEGHRRYSDFRKTILLDRKKVVELVDMH 427

Query: 488 HNKTLSWNEFEVAVRLAHRKRLGMPSPQKVILENPKEEEYFYANPHECLSE 336
           HN TL W+EF   V+  H KR+G P+ +KVI++ PKEE+YFYANPHECL E
Sbjct: 428 HNGTLKWHEFADGVKQVHEKRIGQPTQRKVIIDKPKEEDYFYANPHECLCE 478


>gb|AAF79406.1|AC068197_16 F16A14.24 [Arabidopsis thaliana]
          Length = 507

 Score =  161 bits (408), Expect = 1e-37
 Identities = 76/111 (68%), Positives = 93/111 (83%)
 Frame = -2

Query: 668 KNHSSQMAALGFTVSVASNIFIPTYDENMAKLVEGHRRYNGFRKTIEPDRGKLVELIDLY 489
           +NHSSQMAAL F VSVASN FIPTYD NMAK+VEGHRRY G++KTI  DR +LVEL+DL+
Sbjct: 382 QNHSSQMAALDFMVSVASNTFIPTYDGNMAKVVEGHRRYLGYKKTILLDRKRLVELLDLH 441

Query: 488 HNKTLSWNEFEVAVRLAHRKRLGMPSPQKVILENPKEEEYFYANPHECLSE 336
           HNKTL+W++F VAV+ AH +R G P+ ++VI + PKEE+YFYANP ECL E
Sbjct: 442 HNKTLTWDQFAVAVKEAHERRAGAPTHRRVISDKPKEEDYFYANPQECLCE 492


>ref|XP_002890036.1| hypothetical protein ARALYDRAFT_471563 [Arabidopsis lyrata subsp.
           lyrata] gi|297335878|gb|EFH66295.1| hypothetical protein
           ARALYDRAFT_471563 [Arabidopsis lyrata subsp. lyrata]
          Length = 497

 Score =  161 bits (408), Expect = 1e-37
 Identities = 76/111 (68%), Positives = 93/111 (83%)
 Frame = -2

Query: 668 KNHSSQMAALGFTVSVASNIFIPTYDENMAKLVEGHRRYNGFRKTIEPDRGKLVELIDLY 489
           +NHSSQMAAL F VSVASN FIPTYD NMAK+VEGHRRY G++KTI  DR +LVEL+DL+
Sbjct: 375 QNHSSQMAALDFMVSVASNTFIPTYDGNMAKVVEGHRRYLGYKKTILLDRKRLVELLDLH 434

Query: 488 HNKTLSWNEFEVAVRLAHRKRLGMPSPQKVILENPKEEEYFYANPHECLSE 336
           HNKTL+W++F VAV+ AH +R G P+ ++VI + PKEE+YFYANP ECL E
Sbjct: 435 HNKTLTWDQFAVAVKEAHERRAGAPTHRRVISDKPKEEDYFYANPQECLCE 485


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