BLASTX nr result

ID: Coptis23_contig00003825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003825
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22260.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|XP_004141452.1| PREDICTED: transmembrane protein 230-like [C...   138   5e-31
ref|XP_002308035.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
gb|ABK94415.1| unknown [Populus trichocarpa]                          135   3e-30
gb|AFK46465.1| unknown [Lotus japonicus]                              131   5e-29

>emb|CBI22260.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/113 (61%), Positives = 79/113 (69%)
 Frame = -2

Query: 372 MATRRHVQYSPLSGKEERDYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXX 193
           MA+RR+V+YS L G E+ +Y+ S+ DPRF YTPKSFD++PWK                  
Sbjct: 1   MASRRNVRYSRLLGDEDNEYD-SKFDPRFDYTPKSFDKIPWKSIALALFLLLLGILLLFL 59

Query: 192 XXXXFTGHMGGDRSQAYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIP 34
               FTGHMGGDRSQAYGLL LG L FLPGFYETRIAYY+WRGA GYRF SIP
Sbjct: 60  SIFIFTGHMGGDRSQAYGLLALGALTFLPGFYETRIAYYSWRGAAGYRFGSIP 112


>ref|XP_004141452.1| PREDICTED: transmembrane protein 230-like [Cucumis sativus]
           gi|449481352|ref|XP_004156157.1| PREDICTED:
           transmembrane protein 230-like [Cucumis sativus]
          Length = 116

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/116 (56%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
 Frame = -2

Query: 372 MATRRHVQYSPLSGKE-ERDYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXX 196
           MA+RR+V+YSPL+  + + D  G++ DPRF YTPK+FD++PWK                 
Sbjct: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 195 XXXXXFTGHMGGDRSQAYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 28
                 TGHM G++SQAYGLL LG L FLPGFYETRIAYYAWRGA GYRFASIP Y
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116


>ref|XP_002308035.1| predicted protein [Populus trichocarpa] gi|222854011|gb|EEE91558.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/115 (57%), Positives = 79/115 (68%)
 Frame = -2

Query: 372 MATRRHVQYSPLSGKEERDYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXX 193
           MA+RR+V+YS L   +  D  G + DPRF YTP SFDRVPWK                  
Sbjct: 1   MASRRNVRYSSLPDDDNDDKFGVQYDPRFDYTPGSFDRVPWKSIFLAIFLLFLGCVLLSL 60

Query: 192 XXXXFTGHMGGDRSQAYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 28
               FTGHMGG++SQAYGLL LGI+ F+PGFYETRIAYY+WRGA+GY+FASIP+Y
Sbjct: 61  SFFIFTGHMGGEKSQAYGLLALGIITFMPGFYETRIAYYSWRGAKGYQFASIPKY 115


>gb|ABK94415.1| unknown [Populus trichocarpa]
          Length = 115

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/115 (57%), Positives = 78/115 (67%)
 Frame = -2

Query: 372 MATRRHVQYSPLSGKEERDYNGSEDDPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXXXXX 193
           MA+RR+V+YS L   +  D  G   DPRF YTP SFDRVPWK                  
Sbjct: 1   MASRRNVRYSSLPDDDNDDKFGVHYDPRFDYTPGSFDRVPWKSIFLAIFLLFLGCVLLSL 60

Query: 192 XXXXFTGHMGGDRSQAYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 28
               FTGHMGG++SQAYGLL LGI+ F+PGFYETRIAYY+WRGA+GY+FASIP+Y
Sbjct: 61  SFFIFTGHMGGEKSQAYGLLALGIITFMPGFYETRIAYYSWRGAKGYQFASIPKY 115


>gb|AFK46465.1| unknown [Lotus japonicus]
          Length = 116

 Score =  131 bits (330), Expect = 5e-29
 Identities = 69/118 (58%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
 Frame = -2

Query: 372 MATRRHVQYSPLSGKEERDYNGSED---DPRFAYTPKSFDRVPWKXXXXXXXXXXXXXXX 202
           MATRR V+Y+PL+  E+ DY G  +   DPRF YTPK+ DRVPWK               
Sbjct: 1   MATRR-VRYTPLATDED-DYVGDRNRPFDPRFDYTPKALDRVPWKSIALALFLLFLGTGL 58

Query: 201 XXXXXXXFTGHMGGDRSQAYGLLGLGILAFLPGFYETRIAYYAWRGAQGYRFASIPRY 28
                  FTGHMGG+RSQAYGLL LG L+FLPGFYETR+AYYAWRGA+GYRF++IP Y
Sbjct: 59  LFLSYFIFTGHMGGERSQAYGLLALGFLSFLPGFYETRLAYYAWRGAKGYRFSAIPDY 116


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