BLASTX nr result

ID: Coptis23_contig00003824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003824
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15179.3| unnamed protein product [Vitis vinifera]              159   2e-43
ref|XP_002330133.1| predicted protein [Populus trichocarpa] gi|2...   140   2e-35
emb|CAN74753.1| hypothetical protein VITISV_021413 [Vitis vinifera]   142   1e-31
ref|XP_002514710.1| conserved hypothetical protein [Ricinus comm...   108   3e-25
emb|CAN79831.1| hypothetical protein VITISV_041029 [Vitis vinifera]    50   3e-07

>emb|CBI15179.3| unnamed protein product [Vitis vinifera]
          Length = 508

 Score =  159 bits (401), Expect(2) = 2e-43
 Identities = 98/210 (46%), Positives = 140/210 (66%), Gaps = 3/210 (1%)
 Frame = -3

Query: 900 AVDMEKEKTEELLRCVSEFNDVVLLSKVAAIEAENKYSIILSEKEKELRVAAV---HAQE 730
           AV+ME+ KT ELL+ VSE N+ +L SK+AAIEAE + S +LSEKE EL++       AQ+
Sbjct: 56  AVNMERGKTAELLKHVSELNEAILHSKLAAIEAEKENSAVLSEKEAELQLVTATLAQAQK 115

Query: 729 *LEEMRK*TEMMQDLENHLSERTLFIDSLQSELEQVKKLHTSLKEAASNAMDNXXXXXXX 550
            LEE+RK TE++Q LEN L  +++FI++LQ EL++  +LH+   +AAS A++N       
Sbjct: 116 QLEELRKQTEIVQFLENELLAKSVFIETLQFELKESNELHSLSAKAASEAINNLNQLKSD 175

Query: 549 XXXXXXXXXDQASYMISLETELRQQSEIELKSAKEESILLNHELDML*SEILKAKSDTDE 370
                    +QA  + SLE EL Q  +I+LK+A EE      +++ML  E+ K K + DE
Sbjct: 176 FERQERENSEQAVSINSLEMELNQL-KIKLKNANEEVGCSKCDVEMLRGELEKTKIEVDE 234

Query: 369 ISGKKSATQVEIALLKAQVHKGRSMIAAAE 280
           I G+++  QVEIALLK+++HKGRS IAAAE
Sbjct: 235 IRGRENEAQVEIALLKSELHKGRSRIAAAE 264



 Score = 44.3 bits (103), Expect(2) = 2e-43
 Identities = 22/42 (52%), Positives = 34/42 (80%)
 Frame = -2

Query: 280 AAEERAKSVKSGQTIAVKQLAIEAYKAKKETEKVETRNGESR 155
           AAE RA+SVKSG  +AV+QLA+EA +AKKE+++++    E++
Sbjct: 265 AAEARAESVKSGLYLAVQQLAVEAGEAKKESQRLKQGADEAK 306


>ref|XP_002330133.1| predicted protein [Populus trichocarpa] gi|222871267|gb|EEF08398.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score =  140 bits (353), Expect(2) = 2e-35
 Identities = 82/210 (39%), Positives = 134/210 (63%), Gaps = 3/210 (1%)
 Frame = -3

Query: 900 AVDMEKEKTEELLRCVSEFNDVVLLSKVAAIEAENKYSIILSEKEKELRVA---AVHAQE 730
           A +MEK+++EEL++ V+E N+ +L+SK+A+ EAE +  ++LS+K+  L  A   A  AQE
Sbjct: 198 AANMEKKRSEELVKHVAELNEAILVSKLASFEAEKEKCMVLSDKDARLESAMEMAAQAQE 257

Query: 729 *LEEMRK*TEMMQDLENHLSERTLFIDSLQSELEQVKKLHTSLKEAASNAMDNXXXXXXX 550
            +E+M+K  E+MQ+LEN L  +++ +DSLQ+EL Q  +L +S  +  S+A+ +       
Sbjct: 258 QVEDMKKRLEIMQELENQLLAKSVLVDSLQAELNQASELLSSSNKTVSDAVKDLNQLNVD 317

Query: 549 XXXXXXXXXDQASYMISLETELRQQSEIELKSAKEESILLNHELDML*SEILKAKSDTDE 370
                    D   Y  +LETEL Q  E ELK+  EE+  L+  +++L  E+ +AK+   E
Sbjct: 318 LIVKERDNSDHTFYFGALETELNQL-EAELKNENEEASHLSRNMEILMDELQEAKTKIYE 376

Query: 369 ISGKKSATQVEIALLKAQVHKGRSMIAAAE 280
           I  ++   Q+EIA+LK+++HKGRS ++AAE
Sbjct: 377 IKEREKEAQIEIAVLKSELHKGRSELSAAE 406



 Score = 35.8 bits (81), Expect(2) = 2e-35
 Identities = 17/35 (48%), Positives = 27/35 (77%)
 Frame = -2

Query: 280 AAEERAKSVKSGQTIAVKQLAIEAYKAKKETEKVE 176
           AAE R+ SVK G  +AV+QLA+EA  A++E ++++
Sbjct: 404 AAEARSGSVKPGLYLAVQQLAVEAEAAERENQRLK 438


>emb|CAN74753.1| hypothetical protein VITISV_021413 [Vitis vinifera]
          Length = 237

 Score =  142 bits (357), Expect = 1e-31
 Identities = 95/210 (45%), Positives = 131/210 (62%), Gaps = 3/210 (1%)
 Frame = -3

Query: 900 AVDMEKEKTEELLRCVSEFNDVVLLSKVAAIEAENKYSIILSEKEKEL---RVAAVHAQE 730
           A +MEK KT+ELL+ VSEF++V+L SK+AAIEAE + S +L EKE EL   R     AQE
Sbjct: 25  AANMEKGKTDELLKHVSEFHEVILHSKLAAIEAEKEKSAVLCEKEAELQLVRATLAQAQE 84

Query: 729 *LEEMRK*TEMMQDLENHLSERTLFIDSLQSELEQVKKLHTSLKEAASNAMDNXXXXXXX 550
            LEE+RK TE++Q LEN L  ++ FI++LQ EL++  +L                     
Sbjct: 85  QLEELRKQTEIVQFLENELLAKSEFIETLQFELKEGNEL--------------------- 123

Query: 549 XXXXXXXXXDQASYMISLETELRQQSEIELKSAKEESILLNHELDML*SEILKAKSDTDE 370
                    +QA  + SLE EL Q  +I+LK+A EE   LN +++ML  E+ + K + DE
Sbjct: 124 ---TERENSEQAVSINSLEMELNQ-FKIKLKNANEEVGRLNCDVEMLTGELERTKIEVDE 179

Query: 369 ISGKKSATQVEIALLKAQVHKGRSMIAAAE 280
           I G+++  QVEIALLK++VHKGRS IAAA+
Sbjct: 180 IRGRENEAQVEIALLKSEVHKGRSKIAAAK 209


>ref|XP_002514710.1| conserved hypothetical protein [Ricinus communis]
           gi|223546314|gb|EEF47816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 559

 Score =  108 bits (269), Expect(2) = 3e-25
 Identities = 71/207 (34%), Positives = 116/207 (56%)
 Frame = -3

Query: 900 AVDMEKEKTEELLRCVSEFNDVVLLSKVAAIEAENKYSIILSEKEKELRVAAVHAQE*LE 721
           A ++EKE+ E+LL+ VSE N  + LS+ A+ +A+ + +    EK  E            E
Sbjct: 174 AANIEKERAEQLLKRVSELNQAISLSRQASFDAQKEITNFFPEKNDET-----------E 222

Query: 720 EMRK*TEMMQDLENHLSERTLFIDSLQSELEQVKKLHTSLKEAASNAMDNXXXXXXXXXX 541
           ++RK  EM+ +LE  L  +++FID LQ EL Q  +L +S  +  S+AM++          
Sbjct: 223 DIRKQEEMIHELECQLLSKSVFIDLLQVELNQANELLSSSDKIVSDAMNDLNKLKENLKD 282

Query: 540 XXXXXXDQASYMISLETELRQQSEIELKSAKEESILLNHELDML*SEILKAKSDTDEISG 361
                 D+A Y+  LE+E+    + EL+SA +E+  LN  +  L  E+ K   +  E+  
Sbjct: 283 KEKENSDRAVYVGVLESEMNMLKK-ELESANDEATRLNSNVGKLTDELEKVNIEMVEMKV 341

Query: 360 KKSATQVEIALLKAQVHKGRSMIAAAE 280
           +++  +VEIALLKA++HK R+ +AAAE
Sbjct: 342 RENEAEVEIALLKAELHKARAKLAAAE 368



 Score = 33.9 bits (76), Expect(2) = 3e-25
 Identities = 18/40 (45%), Positives = 27/40 (67%)
 Frame = -2

Query: 280 AAEERAKSVKSGQTIAVKQLAIEAYKAKKETEKVETRNGE 161
           AAE RA +V+SG  +AV+QL+ EA   KKE  +++  + E
Sbjct: 369 AAEARAGNVQSGLYLAVQQLSDEAEHFKKENRRLKQESDE 408


>emb|CAN79831.1| hypothetical protein VITISV_041029 [Vitis vinifera]
          Length = 752

 Score = 50.4 bits (119), Expect(2) = 3e-07
 Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
 Frame = -3

Query: 855 VSEFNDVVLLSKVAAIEAENKYSIILSEKEKELRV---AAVHAQE*LEEMRK*TEMMQDL 685
           + E N+  +L ++A IEA  +   I +++EKE      A    ++ + ++ +  E  +DL
Sbjct: 268 IEEANEDQVLVELARIEAVKELVAIEAQREKEANEFSSAMEKTRKKMSDIIQEIEQSKDL 327

Query: 684 ENHLSERTLFIDSLQSELEQVKKLHTSLKEAASNAMDNXXXXXXXXXXXXXXXXDQASYM 505
           E  LS  T  ID LQ+EL+  KK+  S++        N                 + S +
Sbjct: 328 ETKLSVTTSDIDVLQNELKLAKKIDKSVQ--------NNDSLKHTKGSFRRQEGSETSAL 379

Query: 504 ISLETELRQQSEIELKSAKEESILLNHELDML*SEILKAKSDTDEISGKKSATQVEIALL 325
           +   TE  + ++ EL S KEE       +D++  E+     +T  +   +  + + +  L
Sbjct: 380 LQSVTEELKAAKKELASIKEEGFDFMSSMDVIREELKHVTEETARLKKTEEKSDLTVKNL 439

Query: 324 KAQVHKGRSMIAAAEPPKKGQR 259
             ++ + +S + A    ++  R
Sbjct: 440 NLKLLRAQSKLEATSKAEENAR 461



 Score = 30.8 bits (68), Expect(2) = 3e-07
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -2

Query: 277 AEERAKSVKSGQTIAVKQLAIEAYKAKKETEKV--ETRNGESRYRRRN*ELYLGNQ 116
           AEE A+S+ S  T+ ++QL  +A   KKE E +  ET    +  ++ + E+ L  +
Sbjct: 456 AEENARSIASNLTLTLEQLKTDAEAVKKERELISEETATINAEIQKTDSEIDLNEE 511


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