BLASTX nr result

ID: Coptis23_contig00003823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003823
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38624.3| unnamed protein product [Vitis vinifera]              318   9e-85
ref|XP_002264669.2| PREDICTED: WD repeat-containing protein WRAP...   317   2e-84
ref|XP_003556319.1| PREDICTED: WD repeat-containing protein WRAP...   311   8e-83
ref|XP_002332700.1| predicted protein [Populus trichocarpa] gi|2...   311   1e-82
ref|XP_003536275.1| PREDICTED: WD repeat-containing protein WRAP...   310   2e-82

>emb|CBI38624.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  318 bits (815), Expect = 9e-85
 Identities = 143/184 (77%), Positives = 167/184 (90%)
 Frame = +3

Query: 3   KEVDEPLQFDMSELCMSDEFIKGDSDNPPEGPVRIRYKVMELPISLPFQKPPADKPNPKQ 182
           KEVDEPLQ DMSELC+SD+FI+G+SD  P+G VR+RY+VME+PI+LP QKPPADKPNPKQ
Sbjct: 276 KEVDEPLQLDMSELCLSDDFIQGNSD-APDGHVRVRYEVMEVPITLPSQKPPADKPNPKQ 334

Query: 183 GIGLLSWSKDSHYLFTRNDSMPTVLWIWDIHHLELAAILVQKEPIRAAVWDPTCPRLVIC 362
           G+GL+SWSKDS Y+ TRNDSMPT +WIWDIH LELAAILVQK+PIRAA WDPTCPRLV+C
Sbjct: 335 GVGLMSWSKDSRYICTRNDSMPTAVWIWDIHRLELAAILVQKDPIRAAAWDPTCPRLVLC 394

Query: 363 TSSNHLYMWTASGAYCVSIPLPQFTITDLKWNIDGSCLLLKDRESFCCATVPMLPDSGDE 542
           T S+HLYMWT SGAYCVS PLPQF++TDLKWN DGSCLLLKD+ESFCCA +P+LP+S + 
Sbjct: 395 TGSSHLYMWTPSGAYCVSNPLPQFSVTDLKWNSDGSCLLLKDKESFCCAAMPILPESSEY 454

Query: 543 SSDE 554
           SSD+
Sbjct: 455 SSDD 458


>ref|XP_002264669.2| PREDICTED: WD repeat-containing protein WRAP73 [Vitis vinifera]
          Length = 460

 Score =  317 bits (812), Expect = 2e-84
 Identities = 142/185 (76%), Positives = 168/185 (90%), Gaps = 1/185 (0%)
 Frame = +3

Query: 3   KEVDEPLQFDMSELCMSDEFIKGDSD-NPPEGPVRIRYKVMELPISLPFQKPPADKPNPK 179
           KEVDEPLQ DMSELC+SD+FI+G+S+ + P+G VR+RY+VME+PI+LP QKPPADKPNPK
Sbjct: 276 KEVDEPLQLDMSELCLSDDFIQGNSEEDAPDGHVRVRYEVMEVPITLPSQKPPADKPNPK 335

Query: 180 QGIGLLSWSKDSHYLFTRNDSMPTVLWIWDIHHLELAAILVQKEPIRAAVWDPTCPRLVI 359
           QG+GL+SWSKDS Y+ TRNDSMPT +WIWDIH LELAAILVQK+PIRAA WDPTCPRLV+
Sbjct: 336 QGVGLMSWSKDSRYICTRNDSMPTAVWIWDIHRLELAAILVQKDPIRAAAWDPTCPRLVL 395

Query: 360 CTSSNHLYMWTASGAYCVSIPLPQFTITDLKWNIDGSCLLLKDRESFCCATVPMLPDSGD 539
           CT S+HLYMWT SGAYCVS PLPQF++TDLKWN DGSCLLLKD+ESFCCA +P+LP+S +
Sbjct: 396 CTGSSHLYMWTPSGAYCVSNPLPQFSVTDLKWNSDGSCLLLKDKESFCCAAMPILPESSE 455

Query: 540 ESSDE 554
            SSD+
Sbjct: 456 YSSDD 460


>ref|XP_003556319.1| PREDICTED: WD repeat-containing protein WRAP73-like [Glycine max]
          Length = 458

 Score =  311 bits (798), Expect = 8e-83
 Identities = 141/184 (76%), Positives = 161/184 (87%)
 Frame = +3

Query: 3   KEVDEPLQFDMSELCMSDEFIKGDSDNPPEGPVRIRYKVMELPISLPFQKPPADKPNPKQ 182
           KEVDEPLQ DMSELC+S++F +G  D+P E P R+RY+VME+PI+LPFQKPPA+KPNPKQ
Sbjct: 276 KEVDEPLQLDMSELCLSNDFSQGHDDSPEE-PFRVRYEVMEVPINLPFQKPPAEKPNPKQ 334

Query: 183 GIGLLSWSKDSHYLFTRNDSMPTVLWIWDIHHLELAAILVQKEPIRAAVWDPTCPRLVIC 362
           GIG+LSWS DS Y+ TRNDSMPTVLWIWDI HLELAAILV K+PIRAA WDP C RLV+C
Sbjct: 335 GIGILSWSNDSQYICTRNDSMPTVLWIWDIRHLELAAILVHKDPIRAAAWDPACTRLVLC 394

Query: 363 TSSNHLYMWTASGAYCVSIPLPQFTITDLKWNIDGSCLLLKDRESFCCATVPMLPDSGDE 542
           T S HLYMWT SGAYCV +PLPQFTITDLKWN DGSCLLLKD+ESFCCA VP+LP+S + 
Sbjct: 395 TGSTHLYMWTPSGAYCVHVPLPQFTITDLKWNSDGSCLLLKDKESFCCAAVPLLPESSEY 454

Query: 543 SSDE 554
           SSD+
Sbjct: 455 SSDD 458


>ref|XP_002332700.1| predicted protein [Populus trichocarpa] gi|222832954|gb|EEE71431.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  311 bits (797), Expect = 1e-82
 Identities = 141/184 (76%), Positives = 162/184 (88%)
 Frame = +3

Query: 3   KEVDEPLQFDMSELCMSDEFIKGDSDNPPEGPVRIRYKVMELPISLPFQKPPADKPNPKQ 182
           KEVDEPL  +MSELC+SDEF++G+SD   EG  R+ Y+V E+PISLPFQKPPADKPNPKQ
Sbjct: 107 KEVDEPLHLNMSELCLSDEFLQGNSD-VSEGHFRVMYEVTEVPISLPFQKPPADKPNPKQ 165

Query: 183 GIGLLSWSKDSHYLFTRNDSMPTVLWIWDIHHLELAAILVQKEPIRAAVWDPTCPRLVIC 362
           GIGL+SWSKDS Y++TRNDSMPT LWIWDIHHLELAAILVQK+PIRAA WDPTCPRLV+C
Sbjct: 166 GIGLMSWSKDSRYIYTRNDSMPTALWIWDIHHLELAAILVQKDPIRAAAWDPTCPRLVLC 225

Query: 363 TSSNHLYMWTASGAYCVSIPLPQFTITDLKWNIDGSCLLLKDRESFCCATVPMLPDSGDE 542
           T S+HLYMWT SGAYCVS PLPQF I DLKWN DGSCLLLKD++SFCCA V ++P+S + 
Sbjct: 226 TGSSHLYMWTPSGAYCVSNPLPQFNINDLKWNSDGSCLLLKDKDSFCCAAVSLMPESSEY 285

Query: 543 SSDE 554
           SSD+
Sbjct: 286 SSDD 289


>ref|XP_003536275.1| PREDICTED: WD repeat-containing protein WRAP73-like [Glycine max]
          Length = 458

 Score =  310 bits (795), Expect = 2e-82
 Identities = 141/184 (76%), Positives = 160/184 (86%)
 Frame = +3

Query: 3   KEVDEPLQFDMSELCMSDEFIKGDSDNPPEGPVRIRYKVMELPISLPFQKPPADKPNPKQ 182
           KEVDEPLQ DMSELC+SD+F +G  D+P E P R+RY+VME+PI+LPFQKPPA+KPNPKQ
Sbjct: 276 KEVDEPLQLDMSELCLSDDFSQGHDDSPEE-PFRVRYEVMEVPINLPFQKPPAEKPNPKQ 334

Query: 183 GIGLLSWSKDSHYLFTRNDSMPTVLWIWDIHHLELAAILVQKEPIRAAVWDPTCPRLVIC 362
           GIG+LSWS DS Y+ TRNDSMPTVLWIWDI HLELAAILV K+PIR A WDPTC RLV+C
Sbjct: 335 GIGILSWSTDSQYICTRNDSMPTVLWIWDIRHLELAAILVHKDPIRVAAWDPTCTRLVLC 394

Query: 363 TSSNHLYMWTASGAYCVSIPLPQFTITDLKWNIDGSCLLLKDRESFCCATVPMLPDSGDE 542
           T S HLYMWT SGAYCV +PL QFTITDLKWN DGSCLLLKD+ESFCCA VP+LP+S + 
Sbjct: 395 TGSTHLYMWTPSGAYCVHVPLSQFTITDLKWNSDGSCLLLKDKESFCCAAVPLLPESSEY 454

Query: 543 SSDE 554
           SSD+
Sbjct: 455 SSDD 458


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