BLASTX nr result

ID: Coptis23_contig00003819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003819
         (1474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515572.1| syntaxin, putative [Ricinus communis] gi|223...   417   e-114
ref|XP_003526441.1| PREDICTED: syntaxin-32-like [Glycine max]         407   e-111
ref|XP_003522648.1| PREDICTED: syntaxin-32-like [Glycine max]         405   e-110
ref|XP_002324966.1| predicted protein [Populus trichocarpa] gi|2...   405   e-110
ref|XP_002284775.1| PREDICTED: syntaxin-32 [Vitis vinifera] gi|2...   399   e-108

>ref|XP_002515572.1| syntaxin, putative [Ricinus communis] gi|223545516|gb|EEF47021.1|
            syntaxin, putative [Ricinus communis]
          Length = 346

 Score =  417 bits (1071), Expect = e-114
 Identities = 234/335 (69%), Positives = 253/335 (75%), Gaps = 1/335 (0%)
 Frame = +3

Query: 255  VKSGQSSYRDRTQEFINVTERLKKSVSSSG-VQQNVASSSNSGSKFDAQRSAVSIQSEFN 431
            V  G+SSYRDRTQEF++V ERLKKS SS+     +  SSS+S SK DA RSAV+IQSEFN
Sbjct: 4    VAPGKSSYRDRTQEFLSVVERLKKSFSSANNAAASSTSSSSSISKPDATRSAVAIQSEFN 63

Query: 432  KRASKIGYGIHGTSQXXXXXXXXXXRTSVFDDPTVEIQELTTVIKQDITALNSAVVDLQL 611
            KRASKIG+GIH TSQ          R+SVFDDPT+EIQELT VIKQDITALN+AVVDLQL
Sbjct: 64   KRASKIGFGIHQTSQKLSKLAKLAKRSSVFDDPTMEIQELTAVIKQDITALNAAVVDLQL 123

Query: 612  LCNSQNESGNIXXXXXXXXXXXXXNLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFXX 791
            LCNSQNESGNI             NLKNRLMSATKEFKEVLTMRTENLKVHENRRQLF  
Sbjct: 124  LCNSQNESGNISSDTTTHSTTVVDNLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFSS 183

Query: 792  XXXXXXXXPFVRQRPLAARTVANASNXXXXXWANGSTSSSQLFPRKLMDGETSSPSQPLL 971
                    PFVRQRPLA+R+ ANAS      WANGS SSSQLFP K  DGE    SQPLL
Sbjct: 184  TASKDSTNPFVRQRPLASRSTANASPAPPPPWANGSASSSQLFPSKQTDGE----SQPLL 239

Query: 972  XXXXXXXXXXXXXXMVPLQDSYMQSRAEALQNVESTIHELSNIFQQLATMVSEQGEIAIR 1151
                          MVPLQDSYMQSRAEAL NVESTIHELSNIF QLATMVS+QGE+AIR
Sbjct: 240  -----QQQRQQQQQMVPLQDSYMQSRAEALHNVESTIHELSNIFTQLATMVSQQGELAIR 294

Query: 1152 IDENMEDTLANVEGAQGQLLKYLNGISSNRWLMIK 1256
            IDENM+DTL+NVEGAQ QL++YLN ISSNRWLMIK
Sbjct: 295  IDENMDDTLSNVEGAQNQLVRYLNSISSNRWLMIK 329


>ref|XP_003526441.1| PREDICTED: syntaxin-32-like [Glycine max]
          Length = 339

 Score =  407 bits (1047), Expect = e-111
 Identities = 225/336 (66%), Positives = 249/336 (74%)
 Frame = +3

Query: 249  MYVKSGQSSYRDRTQEFINVTERLKKSVSSSGVQQNVASSSNSGSKFDAQRSAVSIQSEF 428
            M+ KS QSS+RDRTQEF ++TERLKKS    G   N  SSS S ++ + QRSA++ QSEF
Sbjct: 1    MHAKSAQSSFRDRTQEFHSITERLKKS----GSGPNGPSSSTSSTRSEEQRSAIANQSEF 56

Query: 429  NKRASKIGYGIHGTSQXXXXXXXXXXRTSVFDDPTVEIQELTTVIKQDITALNSAVVDLQ 608
            N+RASKIGYGIH TSQ          RTSVFDDPT+EIQELT VIKQDITALNSAVVDLQ
Sbjct: 57   NRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQ 116

Query: 609  LLCNSQNESGNIXXXXXXXXXXXXXNLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFX 788
             LCNS+NESGN+             +LK RLMS TKEFK+VLTMRTEN+KVHENRRQLF 
Sbjct: 117  FLCNSRNESGNVSADTTSHSSTVVDDLKTRLMSTTKEFKDVLTMRTENMKVHENRRQLFS 176

Query: 789  XXXXXXXXXPFVRQRPLAARTVANASNXXXXXWANGSTSSSQLFPRKLMDGETSSPSQPL 968
                     PF+RQRPLAAR  A+ SN     WANGS SSSQ FP+K +DGE    SQPL
Sbjct: 177  SSASKDSANPFIRQRPLAARAAASTSNAPALPWANGSPSSSQAFPKKQVDGE----SQPL 232

Query: 969  LXXXXXXXXXXXXXXMVPLQDSYMQSRAEALQNVESTIHELSNIFQQLATMVSEQGEIAI 1148
            L              +VPLQDSYMQSRAEALQNVESTIHELSNIF QLAT+VS+QGEIAI
Sbjct: 233  L------QQQQQQQEVVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAI 286

Query: 1149 RIDENMEDTLANVEGAQGQLLKYLNGISSNRWLMIK 1256
            RIDENM+DTLANVEGAQG LLKYLN ISSNRWLMIK
Sbjct: 287  RIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIK 322


>ref|XP_003522648.1| PREDICTED: syntaxin-32-like [Glycine max]
          Length = 339

 Score =  405 bits (1040), Expect = e-110
 Identities = 223/336 (66%), Positives = 252/336 (75%)
 Frame = +3

Query: 249  MYVKSGQSSYRDRTQEFINVTERLKKSVSSSGVQQNVASSSNSGSKFDAQRSAVSIQSEF 428
            M+VKS QSS+RDRTQEF ++TERLKKS    G   N  SSS++ S+ + QRSA++ QSEF
Sbjct: 1    MHVKSAQSSFRDRTQEFHSITERLKKS----GSGPNGPSSSSTSSRSEEQRSAIANQSEF 56

Query: 429  NKRASKIGYGIHGTSQXXXXXXXXXXRTSVFDDPTVEIQELTTVIKQDITALNSAVVDLQ 608
            N+RASKIGYGIH TSQ          RTSVFDDPT+EIQELT VIKQDITALNSAVVDLQ
Sbjct: 57   NRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQ 116

Query: 609  LLCNSQNESGNIXXXXXXXXXXXXXNLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFX 788
            L+C+S+NE+GN+             +LK RLMS TKEFK+VLTMRTEN+KVHENRRQLF 
Sbjct: 117  LVCSSRNETGNVSADTSSHSSTVVDDLKTRLMSTTKEFKDVLTMRTENMKVHENRRQLFS 176

Query: 789  XXXXXXXXXPFVRQRPLAARTVANASNXXXXXWANGSTSSSQLFPRKLMDGETSSPSQPL 968
                     PF+RQRPLAAR  A+ S+     WANGS SSSQ FP+K +DGE    SQPL
Sbjct: 177  SSASKDSANPFIRQRPLAARAAASTSSAPALPWANGSPSSSQAFPKKQVDGE----SQPL 232

Query: 969  LXXXXXXXXXXXXXXMVPLQDSYMQSRAEALQNVESTIHELSNIFQQLATMVSEQGEIAI 1148
            L              +VPLQDSYMQSRAEALQNVESTIHELSNIF QLAT+VS+QGEIAI
Sbjct: 233  L------QQQQQQQEVVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAI 286

Query: 1149 RIDENMEDTLANVEGAQGQLLKYLNGISSNRWLMIK 1256
            RIDENM+DTLANVEGAQG LLKYLN ISSNRWLMIK
Sbjct: 287  RIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIK 322


>ref|XP_002324966.1| predicted protein [Populus trichocarpa] gi|222866400|gb|EEF03531.1|
            predicted protein [Populus trichocarpa]
          Length = 338

 Score =  405 bits (1040), Expect = e-110
 Identities = 229/331 (69%), Positives = 250/331 (75%), Gaps = 1/331 (0%)
 Frame = +3

Query: 267  QSSYRDRTQEFINVTERLKKSVSSSGVQQNVASSSN-SGSKFDAQRSAVSIQSEFNKRAS 443
            ++SYRDRTQEF++V ERLKKS SS+    NVASSS+ S +K DA RSAV+IQSEFNKRAS
Sbjct: 7    KTSYRDRTQEFLSVAERLKKSFSSAN---NVASSSSGSSTKADATRSAVAIQSEFNKRAS 63

Query: 444  KIGYGIHGTSQXXXXXXXXXXRTSVFDDPTVEIQELTTVIKQDITALNSAVVDLQLLCNS 623
            KIG GIH TSQ          R SVFDDPT+EIQELT VIKQDIT LNSAVVDLQLLC+S
Sbjct: 64   KIGLGIHQTSQKLAKLAKLAKRKSVFDDPTLEIQELTAVIKQDITVLNSAVVDLQLLCSS 123

Query: 624  QNESGNIXXXXXXXXXXXXXNLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFXXXXXX 803
            QNESGNI             NLKNRLM+ATKEFKEVLTMRTENLKVH+NRRQLF      
Sbjct: 124  QNESGNISSDTTTHSTTVVDNLKNRLMTATKEFKEVLTMRTENLKVHDNRRQLFSSTASK 183

Query: 804  XXXXPFVRQRPLAARTVANASNXXXXXWANGSTSSSQLFPRKLMDGETSSPSQPLLXXXX 983
                PFVRQRPLA+RT ANAS      WANGS SSSQLF  K  D E    SQPLL    
Sbjct: 184  DSSNPFVRQRPLASRTAANASQAPPPPWANGSVSSSQLFTSKQTDVE----SQPLL---- 235

Query: 984  XXXXXXXXXXMVPLQDSYMQSRAEALQNVESTIHELSNIFQQLATMVSEQGEIAIRIDEN 1163
                      MVPLQDSYMQSRAEAL+NVESTIHELSNIF QLATMVS+QGE+AIRIDEN
Sbjct: 236  -----QQQQQMVPLQDSYMQSRAEALRNVESTIHELSNIFTQLATMVSQQGELAIRIDEN 290

Query: 1164 MEDTLANVEGAQGQLLKYLNGISSNRWLMIK 1256
            ME+TL+NVEGAQGQL++YLN ISSNRWLM+K
Sbjct: 291  MEETLSNVEGAQGQLVRYLNSISSNRWLMMK 321


>ref|XP_002284775.1| PREDICTED: syntaxin-32 [Vitis vinifera] gi|297738869|emb|CBI28114.3|
            unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  399 bits (1025), Expect = e-108
 Identities = 224/336 (66%), Positives = 251/336 (74%)
 Frame = +3

Query: 249  MYVKSGQSSYRDRTQEFINVTERLKKSVSSSGVQQNVASSSNSGSKFDAQRSAVSIQSEF 428
            M +KS QSSYRDRTQEF+NV ERLKKS SS+       + ++SG+K D  RS+++IQ EF
Sbjct: 1    MSMKSAQSSYRDRTQEFLNVAERLKKSFSSAAPN----AVTSSGAKPDGTRSSLAIQKEF 56

Query: 429  NKRASKIGYGIHGTSQXXXXXXXXXXRTSVFDDPTVEIQELTTVIKQDITALNSAVVDLQ 608
              RAS+IGYGIH TSQ          RTSVFDDPT+EIQELT V+KQDITALN+AVVDLQ
Sbjct: 57   KDRASRIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVVKQDITALNAAVVDLQ 116

Query: 609  LLCNSQNESGNIXXXXXXXXXXXXXNLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFX 788
            LLCNSQNESGNI             +LKNRLMSATKEFK+VLTMRTENLKVHENRRQLF 
Sbjct: 117  LLCNSQNESGNISSDTTSHSTTVVDDLKNRLMSATKEFKDVLTMRTENLKVHENRRQLFS 176

Query: 789  XXXXXXXXXPFVRQRPLAARTVANASNXXXXXWANGSTSSSQLFPRKLMDGETSSPSQPL 968
                     PFVRQRPLAA++ A AS+     WAN S+SSS LFPRK    + +  SQPL
Sbjct: 177  STASKESTNPFVRQRPLAAKSTATASS-SPPPWANESSSSSPLFPRK----QGNVESQPL 231

Query: 969  LXXXXXXXXXXXXXXMVPLQDSYMQSRAEALQNVESTIHELSNIFQQLATMVSEQGEIAI 1148
            L              +VPLQDSYMQSRAEALQNVESTIHELSNIF QLATMVS+QGE+AI
Sbjct: 232  L------QQQQQQQQLVPLQDSYMQSRAEALQNVESTIHELSNIFTQLATMVSQQGELAI 285

Query: 1149 RIDENMEDTLANVEGAQGQLLKYLNGISSNRWLMIK 1256
            RIDENMEDTLANVEGAQGQL++YLN ISSNRWLMIK
Sbjct: 286  RIDENMEDTLANVEGAQGQLVRYLNSISSNRWLMIK 321


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