BLASTX nr result

ID: Coptis23_contig00003804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003804
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530347.1| sorting nexin 3, putative [Ricinus communis]...   323   2e-86
ref|XP_002282010.2| PREDICTED: sorting nexin-1 [Vitis vinifera] ...   318   1e-84
ref|XP_003518207.1| PREDICTED: sorting nexin-2-like [Glycine max]     308   8e-82
gb|AFK41602.1| unknown [Medicago truncatula]                          306   3e-81
ref|NP_001239848.1| uncharacterized protein LOC100804649 [Glycin...   305   7e-81

>ref|XP_002530347.1| sorting nexin 3, putative [Ricinus communis]
           gi|223530151|gb|EEF32063.1| sorting nexin 3, putative
           [Ricinus communis]
          Length = 399

 Score =  323 bits (829), Expect = 2e-86
 Identities = 163/189 (86%), Positives = 175/189 (92%)
 Frame = -2

Query: 856 LVKRHRELGQSLSDFGKAIKLLGACEGKPLGKAFSDLGAKSESLSVKLQTEAHNLLMNFE 677
           LVKRHRELGQSLSDFGKA KLLGACEG+ LGKAFSDLGAKSE+LS +LQ EAH LLMNFE
Sbjct: 211 LVKRHRELGQSLSDFGKAAKLLGACEGEALGKAFSDLGAKSETLSARLQKEAHQLLMNFE 270

Query: 676 EPLKDYVRAVQSIKATMVERANAFRHQCELAETVKLKEINLDKLMLVRSDKVGEAEIEYK 497
           EPLKDYVRAVQSIKAT+ ERANAFRHQCELAET+KLKEINLDKLML RSDKVGEAEIEYK
Sbjct: 271 EPLKDYVRAVQSIKATIAERANAFRHQCELAETIKLKEINLDKLMLTRSDKVGEAEIEYK 330

Query: 496 ELKADSEEATQRFEMIMRLMSEEIVRFQEQKTLDIGLAFHNFAKGQAELANEIADAWRGL 317
           ELKA+ EEAT+RFE I+R+M+EEIVRFQEQKT D+G+AFH FAKGQA LAN IADAWR L
Sbjct: 331 ELKAEGEEATRRFENIVRVMNEEIVRFQEQKTQDMGIAFHEFAKGQARLANSIADAWRSL 390

Query: 316 LPKLEACSS 290
           LPKLEACSS
Sbjct: 391 LPKLEACSS 399


>ref|XP_002282010.2| PREDICTED: sorting nexin-1 [Vitis vinifera]
           gi|297740147|emb|CBI30329.3| unnamed protein product
           [Vitis vinifera]
          Length = 401

 Score =  318 bits (815), Expect = 1e-84
 Identities = 159/188 (84%), Positives = 175/188 (93%)
 Frame = -2

Query: 856 LVKRHRELGQSLSDFGKAIKLLGACEGKPLGKAFSDLGAKSESLSVKLQTEAHNLLMNFE 677
           LVKRHRELGQSLSDFGKA+K+LGACEG  LGKAFS+LG KSE +S+KLQ EAH+LLMNFE
Sbjct: 212 LVKRHRELGQSLSDFGKAVKILGACEGNGLGKAFSELGTKSEMISIKLQKEAHHLLMNFE 271

Query: 676 EPLKDYVRAVQSIKATMVERANAFRHQCELAETVKLKEINLDKLMLVRSDKVGEAEIEYK 497
           EPLKDYVRAVQSIKAT+ ERANAFR QCELAET+KLKEINLDKLML RSD+VGEAEIEYK
Sbjct: 272 EPLKDYVRAVQSIKATIAERANAFRLQCELAETIKLKEINLDKLMLTRSDRVGEAEIEYK 331

Query: 496 ELKADSEEATQRFEMIMRLMSEEIVRFQEQKTLDIGLAFHNFAKGQAELANEIADAWRGL 317
           ELKA+SEEAT+RFE I+RLM+EEIVRFQEQKTLD+GLAFH FAKGQA LAN IADAWR L
Sbjct: 332 ELKAESEEATKRFETIVRLMNEEIVRFQEQKTLDMGLAFHEFAKGQARLANGIADAWRSL 391

Query: 316 LPKLEACS 293
           +PKLE+CS
Sbjct: 392 IPKLESCS 399


>ref|XP_003518207.1| PREDICTED: sorting nexin-2-like [Glycine max]
          Length = 405

 Score =  308 bits (790), Expect = 8e-82
 Identities = 157/190 (82%), Positives = 172/190 (90%)
 Frame = -2

Query: 856 LVKRHRELGQSLSDFGKAIKLLGACEGKPLGKAFSDLGAKSESLSVKLQTEAHNLLMNFE 677
           LVKRHRELGQSLSDFGKA+KLLGA EG  LGKAFS+LG KSE LS KLQ EAH LLMNFE
Sbjct: 216 LVKRHRELGQSLSDFGKAVKLLGASEGNALGKAFSELGMKSEILSAKLQKEAHQLLMNFE 275

Query: 676 EPLKDYVRAVQSIKATMVERANAFRHQCELAETVKLKEINLDKLMLVRSDKVGEAEIEYK 497
           EPLKDYVRAVQSIKAT+ ERANAFR QCELAET+KLKEINLDKLML+RSDKV EAE EYK
Sbjct: 276 EPLKDYVRAVQSIKATIAERANAFRRQCELAETMKLKEINLDKLMLIRSDKVAEAEHEYK 335

Query: 496 ELKADSEEATQRFEMIMRLMSEEIVRFQEQKTLDIGLAFHNFAKGQAELANEIADAWRGL 317
           ELKA+SE+AT+ FEMI++LM+EE+ RFQEQKTLD+G+AFH FAKGQA LAN IADAWR L
Sbjct: 336 ELKAESEQATKTFEMIVKLMNEEMGRFQEQKTLDMGIAFHEFAKGQARLANGIADAWRSL 395

Query: 316 LPKLEACSSS 287
           LPKLEACS+S
Sbjct: 396 LPKLEACSTS 405


>gb|AFK41602.1| unknown [Medicago truncatula]
          Length = 260

 Score =  306 bits (785), Expect = 3e-81
 Identities = 157/190 (82%), Positives = 171/190 (90%)
 Frame = -2

Query: 856 LVKRHRELGQSLSDFGKAIKLLGACEGKPLGKAFSDLGAKSESLSVKLQTEAHNLLMNFE 677
           LVKRHRELGQSLSDFGKA+KLLGA EG  LGKAFS+LG KSE LSVKLQ EAH LL+NFE
Sbjct: 71  LVKRHRELGQSLSDFGKAVKLLGASEGNALGKAFSELGMKSEILSVKLQNEAHQLLLNFE 130

Query: 676 EPLKDYVRAVQSIKATMVERANAFRHQCELAETVKLKEINLDKLMLVRSDKVGEAEIEYK 497
           EPLKDYVRAVQSIKAT+ ERANAFR QCELAET+KLKEINLDKLML+RS+KV EAE EY 
Sbjct: 131 EPLKDYVRAVQSIKATIAERANAFRRQCELAETMKLKEINLDKLMLIRSEKVAEAEREYH 190

Query: 496 ELKADSEEATQRFEMIMRLMSEEIVRFQEQKTLDIGLAFHNFAKGQAELANEIADAWRGL 317
           ELKA+SE+AT+ FE I++LMSEEI RFQEQKTLD+G+AFH FAKGQA LAN IADAWR L
Sbjct: 191 ELKAESEQATKTFETIVKLMSEEIGRFQEQKTLDMGIAFHEFAKGQARLANGIADAWRSL 250

Query: 316 LPKLEACSSS 287
           LPKLEACSSS
Sbjct: 251 LPKLEACSSS 260


>ref|NP_001239848.1| uncharacterized protein LOC100804649 [Glycine max]
           gi|255640209|gb|ACU20395.1| unknown [Glycine max]
          Length = 405

 Score =  305 bits (782), Expect = 7e-81
 Identities = 156/190 (82%), Positives = 170/190 (89%)
 Frame = -2

Query: 856 LVKRHRELGQSLSDFGKAIKLLGACEGKPLGKAFSDLGAKSESLSVKLQTEAHNLLMNFE 677
           LVKRHRELGQSLSDFGKA+KLLGA EG  LGKAFS+LG KSE LS KLQ EAH LLMNFE
Sbjct: 216 LVKRHRELGQSLSDFGKAVKLLGASEGNALGKAFSELGMKSEILSAKLQKEAHQLLMNFE 275

Query: 676 EPLKDYVRAVQSIKATMVERANAFRHQCELAETVKLKEINLDKLMLVRSDKVGEAEIEYK 497
           EPLKDYV AVQSIKAT+ ERANAFR QCELAET+KLKEINLDKLML+RSDKV EAE EYK
Sbjct: 276 EPLKDYVHAVQSIKATIAERANAFRRQCELAETMKLKEINLDKLMLIRSDKVAEAEHEYK 335

Query: 496 ELKADSEEATQRFEMIMRLMSEEIVRFQEQKTLDIGLAFHNFAKGQAELANEIADAWRGL 317
           ELKA+SE+AT+ FE I++LM+EE+ RFQEQKTLD+G+AFH FAKGQA LAN IADAWR L
Sbjct: 336 ELKAESEQATKTFETIVKLMNEEMGRFQEQKTLDMGIAFHEFAKGQARLANGIADAWRSL 395

Query: 316 LPKLEACSSS 287
           LPKLEACSSS
Sbjct: 396 LPKLEACSSS 405


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