BLASTX nr result

ID: Coptis23_contig00003755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003755
         (1970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318860.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
ref|XP_002321861.1| predicted protein [Populus trichocarpa] gi|2...   395   e-107
ref|NP_001235441.1| Cu/Zn-superoxide dismutase copper chaperone ...   388   e-105
ref|XP_002509655.1| superoxide dismutase copper chaperone, putat...   387   e-105
ref|XP_002270958.1| PREDICTED: subtilisin-like protease [Vitis v...   386   e-104

>ref|XP_002318860.1| predicted protein [Populus trichocarpa] gi|222859533|gb|EEE97080.1|
            predicted protein [Populus trichocarpa]
          Length = 778

 Score =  397 bits (1019), Expect = e-108
 Identities = 187/251 (74%), Positives = 209/251 (83%)
 Frame = -2

Query: 1969 GVNILAAWTEKIGPSGLPTDHRKVKFNILSGTSMSCPHVSGVAALLKARHPEWSPAAIKS 1790
            GVNILAAWT  +GPS LPTDHR+ KFNILSGTSMSCPHVSG+AALLKARHPEWSPAAIKS
Sbjct: 526  GVNILAAWTGDLGPSSLPTDHRRSKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKS 585

Query: 1789 ALMTTAYIHDNTFDPLKDASTNAPSNPFDHGAGHINPSRALDPGLIYDIASDDYLNFLCT 1610
            ALMTTAY+HDNT  PLKDAST  PS PFDHGAGHINP +A DPGLIYD+   DY +FLCT
Sbjct: 586  ALMTTAYVHDNTHHPLKDASTATPSTPFDHGAGHINPMKAQDPGLIYDLEPQDYFDFLCT 645

Query: 1609 QKLTPMQLRAFTKSSNRSCRHSFANPGDLNYPSISAVFPEHPSSSVLTLHRTVTNVGSTT 1430
            QKLTP QL+ F K +NRSCRHS ANPGDLNYPSISA+FP+  S  VLTLHRTVTNVG  T
Sbjct: 646  QKLTPTQLKVFGKYANRSCRHSLANPGDLNYPSISAIFPDDTSIKVLTLHRTVTNVGLPT 705

Query: 1429 SIYKVRVSPLKGVYVTVNPKVLHFTRKHQKLSFNITFTTKSRQSTPDFGALMWSDGVHKV 1250
            S Y V VSP KG  V V P++L+FTRK+QKLS+ I FTTK+R++ P+FG L+W DG HKV
Sbjct: 706  STYHVVVSPFKGATVKVEPEILNFTRKNQKLSYKIIFTTKTRKTMPEFGGLVWKDGAHKV 765

Query: 1249 RSPIVVTWLPP 1217
            RSPI +TWL P
Sbjct: 766  RSPIAITWLTP 776


>ref|XP_002321861.1| predicted protein [Populus trichocarpa] gi|222868857|gb|EEF05988.1|
            predicted protein [Populus trichocarpa]
          Length = 741

 Score =  395 bits (1014), Expect = e-107
 Identities = 184/251 (73%), Positives = 209/251 (83%)
 Frame = -2

Query: 1969 GVNILAAWTEKIGPSGLPTDHRKVKFNILSGTSMSCPHVSGVAALLKARHPEWSPAAIKS 1790
            GVNILAAWT  +GPS LPTDHR+VKFNILSGTSMSCPHVSG+AALLKARHPEWSPAAIKS
Sbjct: 489  GVNILAAWTGDLGPSSLPTDHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKS 548

Query: 1789 ALMTTAYIHDNTFDPLKDASTNAPSNPFDHGAGHINPSRALDPGLIYDIASDDYLNFLCT 1610
            ALMTTAY+HDNT +PLKDAS   PS P+DHGAGHINP +ALDPGLIYDI   DY +FLCT
Sbjct: 549  ALMTTAYVHDNTHNPLKDASATTPSTPYDHGAGHINPMKALDPGLIYDIEPQDYFDFLCT 608

Query: 1609 QKLTPMQLRAFTKSSNRSCRHSFANPGDLNYPSISAVFPEHPSSSVLTLHRTVTNVGSTT 1430
            QKLTP QL+ F K +NRSCRHS ANPGDLNYP+IS VFP+  S  VLTLHRTVTNVG  T
Sbjct: 609  QKLTPTQLKVFGKYANRSCRHSLANPGDLNYPAISVVFPDDTSIKVLTLHRTVTNVGLPT 668

Query: 1429 SIYKVRVSPLKGVYVTVNPKVLHFTRKHQKLSFNITFTTKSRQSTPDFGALMWSDGVHKV 1250
            S Y   +SP KG  V V P++L+FT K+QKLS+ I FTT++RQ+ P+FG L+W DG HKV
Sbjct: 669  SKYHAVISPFKGATVKVEPEILNFTMKNQKLSYKIIFTTRTRQTIPEFGGLVWKDGAHKV 728

Query: 1249 RSPIVVTWLPP 1217
            RSP+V+TWL P
Sbjct: 729  RSPVVITWLTP 739


>ref|NP_001235441.1| Cu/Zn-superoxide dismutase copper chaperone [Glycine max]
           gi|12711645|gb|AAK01931.1|AF329816_1 Cu/Zn-superoxide
           dismutase copper chaperone precursor [Glycine max]
          Length = 304

 Score =  388 bits (997), Expect = e-105
 Identities = 193/231 (83%), Positives = 213/231 (92%), Gaps = 1/231 (0%)
 Frame = +1

Query: 256 TEFMVDMKCEGCVNAVKNKLLTVDGVKGVEVDLSNQVVRVLGSSPVKNMTDALEQTGRKA 435
           TEFMVDMKCEGCVNAVKNKL  ++GVK VEVDLSNQVVR+LGS+PVK MT+ALEQTGRKA
Sbjct: 74  TEFMVDMKCEGCVNAVKNKLNEINGVKNVEVDLSNQVVRILGSTPVKTMTEALEQTGRKA 133

Query: 436 RLIGQGNAEDFLVSAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEF 615
           RLIGQG  EDFL+SAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEF
Sbjct: 134 RLIGQGVPEDFLISAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEF 193

Query: 616 GDLTKGAASTGKVFNPTNQVN-EEPLGDLGTLDAQENGEAFFSGVKPMLRVVDLIGRSIV 792
           GDLT+GAASTGK+FNP N+ N +EPLGDLGTL+A E GEAF+SGVK  LRV DLIGRS+V
Sbjct: 194 GDLTRGAASTGKMFNPVNEENSKEPLGDLGTLEANEKGEAFYSGVKEKLRVADLIGRSVV 253

Query: 793 LYETENKSDSGIAAAVIARSAGVGENYKKLCTCDGTTIWESSNSDFVVSKV 945
           +Y TE+KS+ GI AAVIARSAGVGENYKKLCTCDGTTIWE++++DFV SKV
Sbjct: 254 VYATEDKSEHGITAAVIARSAGVGENYKKLCTCDGTTIWEATDTDFVTSKV 304


>ref|XP_002509655.1| superoxide dismutase copper chaperone, putative [Ricinus communis]
           gi|223549554|gb|EEF51042.1| superoxide dismutase copper
           chaperone, putative [Ricinus communis]
          Length = 330

 Score =  387 bits (995), Expect = e-105
 Identities = 197/231 (85%), Positives = 209/231 (90%), Gaps = 1/231 (0%)
 Frame = +1

Query: 256 TEFMVDMKCEGCVNAVKNKLLTVDGVKGVEVDLSNQVVRVLGSSPVKNMTDALEQTGRKA 435
           TEFMVDMKCEGCV AVKNKL TV+GVK VEVDL NQVVRVLGSSPVK MT+ALEQTGR A
Sbjct: 100 TEFMVDMKCEGCVGAVKNKLQTVNGVKNVEVDLGNQVVRVLGSSPVKIMTEALEQTGRTA 159

Query: 436 RLIGQGNAEDFLVSAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEF 615
           RLIGQG  EDFLVSAAV+EFKGPDIFGVVR AQVNMELARIEANFSGLSPGKHGWSINEF
Sbjct: 160 RLIGQGVPEDFLVSAAVAEFKGPDIFGVVRFAQVNMELARIEANFSGLSPGKHGWSINEF 219

Query: 616 GDLTKGAASTGKVFNPTNQVNE-EPLGDLGTLDAQENGEAFFSGVKPMLRVVDLIGRSIV 792
           GDLT+GAASTGKV+NP+NQ  E EP GDLGTL+  ENGEAFFSG K  LRVVDLIGRS+V
Sbjct: 220 GDLTRGAASTGKVYNPSNQGTEKEPQGDLGTLEVDENGEAFFSGSKQKLRVVDLIGRSVV 279

Query: 793 LYETENKSDSGIAAAVIARSAGVGENYKKLCTCDGTTIWESSNSDFVVSKV 945
           +Y TE+KSD+G+ AAVIARSAGVGENYKKLCTCDGTTIWESSN DFV SKV
Sbjct: 280 VYGTEDKSDNGLTAAVIARSAGVGENYKKLCTCDGTTIWESSNKDFVTSKV 330


>ref|XP_002270958.1| PREDICTED: subtilisin-like protease [Vitis vinifera]
          Length = 774

 Score =  386 bits (991), Expect = e-104
 Identities = 183/251 (72%), Positives = 210/251 (83%)
 Frame = -2

Query: 1969 GVNILAAWTEKIGPSGLPTDHRKVKFNILSGTSMSCPHVSGVAALLKARHPEWSPAAIKS 1790
            GVNILAAW+  +GPS LPTDHRKV+FNILSGTSMSCPHVSG+AALLKARHP+WSPAAI+S
Sbjct: 524  GVNILAAWSGDMGPSSLPTDHRKVRFNILSGTSMSCPHVSGIAALLKARHPDWSPAAIRS 583

Query: 1789 ALMTTAYIHDNTFDPLKDASTNAPSNPFDHGAGHINPSRALDPGLIYDIASDDYLNFLCT 1610
            ALMTTAY+HDNT +PL+DAST  PS P+DHGAGHINP +ALDPGLIYDI   DY  FLC 
Sbjct: 584  ALMTTAYVHDNTRNPLRDASTGQPSTPYDHGAGHINPLKALDPGLIYDIGPQDYFEFLCK 643

Query: 1609 QKLTPMQLRAFTKSSNRSCRHSFANPGDLNYPSISAVFPEHPSSSVLTLHRTVTNVGSTT 1430
            QKLTP+QL+ F K S RSCRH+ A+ GDLNYP+ISAVFP+  S + LTLHRTVTNVG   
Sbjct: 644  QKLTPIQLKVFGK-SKRSCRHTLASGGDLNYPAISAVFPDKASVTTLTLHRTVTNVGPPM 702

Query: 1429 SIYKVRVSPLKGVYVTVNPKVLHFTRKHQKLSFNITFTTKSRQSTPDFGALMWSDGVHKV 1250
            S Y V VS  KGV V + P VL+FT KHQKLS+ IT TTKSRQS+P+FG+L+W DGVHKV
Sbjct: 703  SKYHVAVSQFKGVAVKIEPAVLNFTSKHQKLSYKITLTTKSRQSSPEFGSLIWKDGVHKV 762

Query: 1249 RSPIVVTWLPP 1217
            RSP+ +TWLPP
Sbjct: 763  RSPVAITWLPP 773


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