BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003748
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285325.1| PREDICTED: photosystem II core complex prote...   186   6e-45
ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Popu...   181   2e-43
gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]      177   2e-42
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]      177   2e-42
ref|XP_002312650.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39

>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Vitis vinifera]
          Length = 201

 Score =  186 bits (471), Expect = 6e-45
 Identities = 109/201 (54%), Positives = 136/201 (67%), Gaps = 5/201 (2%)
 Frame = +3

Query: 126 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVTVLPLQALQKVSTTSKSSENFNLS- 302
           MA+TIAT AML+AKC+S + SP  ++ S+PT KP+++L +Q L K  TT KSSEN NLS 
Sbjct: 1   MAATIATMAMLNAKCLSIN-SPKNLNLSKPTAKPISLLSIQNLPKGLTTLKSSENQNLST 59

Query: 303 SLTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPAL 482
           SL GTA+AGA+FSTLSSC PA AAQQIA+IA+GDNRG               +NILQPAL
Sbjct: 60  SLAGTAIAGAIFSTLSSCDPALAAQQIAEIADGDNRGLALLLPIIPAIAWVLFNILQPAL 119

Query: 483 NQINKMNSTKGVIVXXXXXXXA---YVSAPTASASEVAMIGE-ASSDNRGXXXXXXXXXX 650
           NQ+NKM STKGVI+       A   ++  P ASASE+A + + ASSDNRG          
Sbjct: 120 NQLNKMRSTKGVIIGLGLGGLAASGFMLTPHASASEIATLADAASSDNRGQLLLFVVTPA 179

Query: 651 XXXXXFNILQPALNQIDRMKS 713
                +NILQPALNQ++RM+S
Sbjct: 180 ILWVLYNILQPALNQLNRMRS 200


>ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Populus trichocarpa]
           gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864685|gb|EEF01816.1|
           hypothetical protein POPTRDRAFT_726168 [Populus
           trichocarpa]
          Length = 196

 Score =  181 bits (458), Expect = 2e-43
 Identities = 102/199 (51%), Positives = 135/199 (67%), Gaps = 3/199 (1%)
 Frame = +3

Query: 126 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVTVLPLQALQKVSTTSKSSENFNLSS 305
           MA+T+AT A+L+AKC+S +++ N +  ++P+ KPV++L +Q L K  T SK ++N   + 
Sbjct: 1   MAATMATMAILNAKCLSINSNKN-ISPTKPSTKPVSLLSMQNLPKGLTISKPADN---TV 56

Query: 306 LTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALN 485
           LTGTA+AGA+F+TLSSC PAFAAQQIA+IAEGDNRG               +NILQPALN
Sbjct: 57  LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALN 116

Query: 486 QINKMNSTKGVIVXXXXXXXA---YVSAPTASASEVAMIGEASSDNRGXXXXXXXXXXXX 656
           QIN+M  TKGVIV       A   ++S P ASASE+AMI +A+SDNRG            
Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPHASASEIAMIADATSDNRGTLLLIVVAPAIL 176

Query: 657 XXXFNILQPALNQIDRMKS 713
              +NILQPALNQI++M+S
Sbjct: 177 WVLYNILQPALNQINKMRS 195


>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  177 bits (450), Expect = 2e-42
 Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 3/199 (1%)
 Frame = +3

Query: 126 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVTVLPLQALQKVSTTSKSSENFNLSS 305
           MA+T+AT A+L+AKC+S ++  N +   +P+ KPV++L +  L K  T SK ++N   + 
Sbjct: 1   MAATMATMAILNAKCLSINSIKN-ISPPKPSTKPVSLLSMLNLPKGLTISKPADN---TV 56

Query: 306 LTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALN 485
           LTGTA+AGA+F+TLSSC PAFAAQQIA+IAEGDNRG               +NILQPALN
Sbjct: 57  LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALN 116

Query: 486 QINKMNSTKGVIVXXXXXXXA---YVSAPTASASEVAMIGEASSDNRGXXXXXXXXXXXX 656
           QIN+M  TKGVIV       A   ++S P ASASE+AMI EA+SDNRG            
Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEATSDNRGTLLLIVVAPAIL 176

Query: 657 XXXFNILQPALNQIDRMKS 713
              +NILQPALNQI++M+S
Sbjct: 177 WVLYNILQPALNQINKMRS 195


>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  177 bits (450), Expect = 2e-42
 Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 3/199 (1%)
 Frame = +3

Query: 126 MASTIATTAMLSAKCVSSSTSPNRVHSSRPTIKPVTVLPLQALQKVSTTSKSSENFNLSS 305
           MA+T+AT A+L+AKC+S ++  N +   +P+ KPV++L +  L K  T SK ++N   + 
Sbjct: 1   MAATMATMAILNAKCLSINSIKN-ISPPKPSTKPVSLLSMLNLPKGLTISKPADN---TV 56

Query: 306 LTGTALAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALN 485
           LTGTA+AGA+F+TLSSC PAFAAQQIA+IAEGDNRG               +NILQPALN
Sbjct: 57  LTGTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALN 116

Query: 486 QINKMNSTKGVIVXXXXXXXA---YVSAPTASASEVAMIGEASSDNRGXXXXXXXXXXXX 656
           QIN+M  TKGVIV       A   ++S P ASASE+AMI EA+SDNRG            
Sbjct: 117 QINRMRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEAASDNRGTLLLIVVAPAIL 176

Query: 657 XXXFNILQPALNQIDRMKS 713
              +NILQPALNQI++M+S
Sbjct: 177 WVLYNILQPALNQINKMRS 195


>ref|XP_002312650.1| predicted protein [Populus trichocarpa] gi|222852470|gb|EEE90017.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  167 bits (424), Expect = 2e-39
 Identities = 95/194 (48%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
 Frame = +3

Query: 141 ATTAMLSAKCVSSSTSPNRVHSSRPTIKPVTVLPLQALQKVSTTSKSSENFNLSSLTGTA 320
           AT A+L+AKC+S + + N  +  +P  KP+ +L +Q L K  T SK ++N   ++L GTA
Sbjct: 3   ATMAILNAKCLSINANKN-TNPIKPPTKPIYLLAMQNLPKGLTISKPADN---TALAGTA 58

Query: 321 LAGAVFSTLSSCHPAFAAQQIADIAEGDNRGXXXXXXXXXXXXXXXYNILQPALNQINKM 500
           +AGA+F+TLSSC PAFAAQQIA+IAEGDNRG               +NILQPALNQ+N+M
Sbjct: 59  IAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQVNRM 118

Query: 501 NSTKGVIVXXXXXXXA---YVSAPTASASEVAMIGEASSDNRGXXXXXXXXXXXXXXXFN 671
             T+GVI+       A   ++S P ASASE+AMI EA+SD+RG               +N
Sbjct: 119 RETRGVIIGLGLGGLAASGFMSTPDASASEIAMIAEATSDSRGTLLLLVVAPAILWVLYN 178

Query: 672 ILQPALNQIDRMKS 713
           ILQPALNQI+RM+S
Sbjct: 179 ILQPALNQINRMRS 192