BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003728
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535140.1| conserved hypothetical protein [Ricinus comm...   105   1e-20
emb|CBI31105.3| unnamed protein product [Vitis vinifera]               71   3e-17
emb|CBI31099.3| unnamed protein product [Vitis vinifera]               52   2e-06

>ref|XP_002535140.1| conserved hypothetical protein [Ricinus communis]
           gi|223523945|gb|EEF27246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 114

 Score =  105 bits (263), Expect = 1e-20
 Identities = 66/141 (46%), Positives = 72/141 (51%)
 Frame = +3

Query: 300 MSSPGWSTVRQNRHRLGAIDGTW*AHLSPYGSAAGT*RCG*RKPKKATSCRSRDLHRXXX 479
           MSSPGWSTVRQNRHRLGAIDGTW  H+  +   A        + +        +L     
Sbjct: 1   MSSPGWSTVRQNRHRLGAIDGTW--HIEMWVEEASK-----SEGRAVGHVICTELVADWA 53

Query: 480 XXXXXXDQSRSARPIGRSNRAGPCPGTSNEIGGRVLFLQPF*YDRPGPLPPIPYV*EQDP 659
                 DQ        RSNRAGPC  TSNEIGGR                       +D 
Sbjct: 54  FSWIKADQLAFLLSKSRSNRAGPCLRTSNEIGGR----------------------GRDS 91

Query: 660 PKNDQSCGGTEGTDSANVPRP 722
           PKNDQSCGGTEGTDSANVPRP
Sbjct: 92  PKNDQSCGGTEGTDSANVPRP 112


>emb|CBI31105.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score = 70.9 bits (172), Expect(2) = 3e-17
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = +2

Query: 623 PSPYPLCLGAGSTQERPVLWWYGRHGLRER 712
           PSPYPLCLGAGS QERPVLWWYGRHGLRER
Sbjct: 186 PSPYPLCLGAGSAQERPVLWWYGRHGLRER 215



 Score = 44.3 bits (103), Expect(2) = 3e-17
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = +1

Query: 454 HVTCTDKVADWAFSLIKADQLAPLVGR 534
           HVTCT+ VADWAFSLIKAD LA L+ +
Sbjct: 152 HVTCTELVADWAFSLIKADPLAFLLSK 178


>emb|CBI31099.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score = 52.0 bits (123), Expect(2) = 2e-06
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +1

Query: 427 SLKKRRAVGHVTCTDKVADWAFSLIKADQLAPLVGR 534
           S  + RAVGHVTCT+ VADWAFSLIKAD LA L+ +
Sbjct: 186 SKSEGRAVGHVTCTELVADWAFSLIKADPLAFLLSK 221



 Score = 26.6 bits (57), Expect(2) = 2e-06
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +3

Query: 528 RSNRAGPCPGTSNEI 572
           RSNRA  CPGTSNEI
Sbjct: 223 RSNRA--CPGTSNEI 235