BLASTX nr result

ID: Coptis23_contig00003708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003708
         (1795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37113.3| unnamed protein product [Vitis vinifera]              669   0.0  
ref|XP_002273202.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   669   0.0  
ref|XP_002306848.1| predicted protein [Populus trichocarpa] gi|2...   668   0.0  
ref|XP_002524618.1| conserved hypothetical protein [Ricinus comm...   663   0.0  
ref|NP_001189649.1| uncharacterized protein [Arabidopsis thalian...   640   0.0  

>emb|CBI37113.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  669 bits (1727), Expect = 0.0
 Identities = 328/422 (77%), Positives = 374/422 (88%)
 Frame = +3

Query: 99   KITKKVEEISAQQRPVLWIENFDTVSRQYQFDSQGTLSVKVVDDSRPVIHKVVESFLNKF 278
            K  KK +E +  Q  V WIE  D+VSR YQF S G LS+KVVDDSR V+H+VVESFLNKF
Sbjct: 3    KEMKKEQERAVAQGAVFWIETSDSVSRHYQFHSNGDLSMKVVDDSRTVVHRVVESFLNKF 62

Query: 279  FPSGYPYSVHEGYLRYSQFRVLQHFTSAALSVLSTQSLLFAAGLRPTPAQATAVSWVLKD 458
            FPSGYPYSV+EGYLRY+QFR LQHF+SAALSVLSTQSLLFAAGLRPTPAQATAVSWVLKD
Sbjct: 63   FPSGYPYSVNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGLRPTPAQATAVSWVLKD 122

Query: 459  GMQHVGKLICSNLGARMDSEPKSWRILADVLYDLGTGLEVLSPLCPQLFLEMAGLGNFAK 638
            GMQHVGKLICSNLGARMDSEPK WRILAD LYDLGTGLEVLSPLCP LFLEMAGLGNFAK
Sbjct: 123  GMQHVGKLICSNLGARMDSEPKLWRILADALYDLGTGLEVLSPLCPHLFLEMAGLGNFAK 182

Query: 639  GMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAMSTLANVLGIGAGIYLASTVCSSIQGK 818
            GMAVVAARATRLPIYSSFAKEGNLSDLFAKGEA+STL NV+G+GAGI LAST+CSS+QGK
Sbjct: 183  GMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGMGAGIQLASTICSSMQGK 242

Query: 819  LVVGPLLSAVHVYCVCQEMRAAPINTLNPQRTAMVVADFVKDGQISGPADLRYREDLLFP 998
            ++ GPLLS +HVY V +EMRAAP+NTLNPQRTAM+VADF+K G+IS PADLRY+EDL+F 
Sbjct: 243  MIAGPLLSVIHVYSVIEEMRAAPVNTLNPQRTAMIVADFIKTGKISSPADLRYQEDLIFT 302

Query: 999  ARIIEEAGSVKVGRPLHKVVKPSKLSRLRDIFPEEKFLISRGSKCTDMVLEHNATGEDAL 1178
             R+IE+AG+VKVGR LHKVVKPSKL +L+ +FPEEKFL+  G K TDMVLEH+ATGEDAL
Sbjct: 303  GRLIEDAGNVKVGRDLHKVVKPSKLCKLKGVFPEEKFLLCHGKKWTDMVLEHDATGEDAL 362

Query: 1179 RGWLVAAYAASMEKPGYGSSEIILKDAYEKMQTLFPSFLSELKLKGWHTDRFLDGTGNRF 1358
            RGWLVAAY A++EK  +  S  +L++AY+KM ++F +F+S+L+ KGWHTD FLDGTG+RF
Sbjct: 363  RGWLVAAYVANLEKTDHEPSMTVLQEAYDKMNSVFSTFVSKLQAKGWHTDCFLDGTGSRF 422

Query: 1359 AW 1364
            AW
Sbjct: 423  AW 424


>ref|XP_002273202.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
          Length = 420

 Score =  669 bits (1726), Expect = 0.0
 Identities = 327/419 (78%), Positives = 373/419 (89%)
 Frame = +3

Query: 108  KKVEEISAQQRPVLWIENFDTVSRQYQFDSQGTLSVKVVDDSRPVIHKVVESFLNKFFPS 287
            KK +E +  Q  V WIE  D+VSR YQF S G LS+KVVDDSR V+H+VVESFLNKFFPS
Sbjct: 2    KKEQERAVAQGAVFWIETSDSVSRHYQFHSNGDLSMKVVDDSRTVVHRVVESFLNKFFPS 61

Query: 288  GYPYSVHEGYLRYSQFRVLQHFTSAALSVLSTQSLLFAAGLRPTPAQATAVSWVLKDGMQ 467
            GYPYSV+EGYLRY+QFR LQHF+SAALSVLSTQSLLFAAGLRPTPAQATAVSWVLKDGMQ
Sbjct: 62   GYPYSVNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGLRPTPAQATAVSWVLKDGMQ 121

Query: 468  HVGKLICSNLGARMDSEPKSWRILADVLYDLGTGLEVLSPLCPQLFLEMAGLGNFAKGMA 647
            HVGKLICSNLGARMDSEPK WRILAD LYDLGTGLEVLSPLCP LFLEMAGLGNFAKGMA
Sbjct: 122  HVGKLICSNLGARMDSEPKLWRILADALYDLGTGLEVLSPLCPHLFLEMAGLGNFAKGMA 181

Query: 648  VVAARATRLPIYSSFAKEGNLSDLFAKGEAMSTLANVLGIGAGIYLASTVCSSIQGKLVV 827
            VVAARATRLPIYSSFAKEGNLSDLFAKGEA+STL NV+G+GAGI LAST+CSS+QGK++ 
Sbjct: 182  VVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGMGAGIQLASTICSSMQGKMIA 241

Query: 828  GPLLSAVHVYCVCQEMRAAPINTLNPQRTAMVVADFVKDGQISGPADLRYREDLLFPARI 1007
            GPLLS +HVY V +EMRAAP+NTLNPQRTAM+VADF+K G+IS PADLRY+EDL+F  R+
Sbjct: 242  GPLLSVIHVYSVIEEMRAAPVNTLNPQRTAMIVADFIKTGKISSPADLRYQEDLIFTGRL 301

Query: 1008 IEEAGSVKVGRPLHKVVKPSKLSRLRDIFPEEKFLISRGSKCTDMVLEHNATGEDALRGW 1187
            IE+AG+VKVGR LHKVVKPSKL +L+ +FPEEKFL+  G K TDMVLEH+ATGEDALRGW
Sbjct: 302  IEDAGNVKVGRDLHKVVKPSKLCKLKGVFPEEKFLLCHGKKWTDMVLEHDATGEDALRGW 361

Query: 1188 LVAAYAASMEKPGYGSSEIILKDAYEKMQTLFPSFLSELKLKGWHTDRFLDGTGNRFAW 1364
            LVAAY A++EK  +  S  +L++AY+KM ++F +F+S+L+ KGWHTD FLDGTG+RFAW
Sbjct: 362  LVAAYVANLEKTDHEPSMTVLQEAYDKMNSVFSTFVSKLQAKGWHTDCFLDGTGSRFAW 420


>ref|XP_002306848.1| predicted protein [Populus trichocarpa] gi|222856297|gb|EEE93844.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  668 bits (1724), Expect = 0.0
 Identities = 332/429 (77%), Positives = 375/429 (87%)
 Frame = +3

Query: 78   MNVLAKIKITKKVEEISAQQRPVLWIENFDTVSRQYQFDSQGTLSVKVVDDSRPVIHKVV 257
            MN+L KIK+ KK E     + PV WIE  D+VSR +QF+  G LS+KVVDD+RPV  +VV
Sbjct: 1    MNLLDKIKMQKK-EPDKTPEIPVYWIETSDSVSRHFQFEPDGQLSMKVVDDARPVYRRVV 59

Query: 258  ESFLNKFFPSGYPYSVHEGYLRYSQFRVLQHFTSAALSVLSTQSLLFAAGLRPTPAQATA 437
            ESFLNKFFPSGYPYSV+EGYLRY+QFR LQHF+SAALSVLSTQSLLFAAGLRPTPAQATA
Sbjct: 60   ESFLNKFFPSGYPYSVNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGLRPTPAQATA 119

Query: 438  VSWVLKDGMQHVGKLICSNLGARMDSEPKSWRILADVLYDLGTGLEVLSPLCPQLFLEMA 617
            VSW+LKDGMQH GKLICSNLGARMDSEPK WRILADVLYDLGTGLEVLSPLCP LFLE+A
Sbjct: 120  VSWILKDGMQHAGKLICSNLGARMDSEPKRWRILADVLYDLGTGLEVLSPLCPHLFLEVA 179

Query: 618  GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAMSTLANVLGIGAGIYLASTV 797
            GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEA+STL NVLG+G GI LASTV
Sbjct: 180  GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVLGLGVGIQLASTV 239

Query: 798  CSSIQGKLVVGPLLSAVHVYCVCQEMRAAPINTLNPQRTAMVVADFVKDGQISGPADLRY 977
            CSS+QGK V GPLLS VHV CV +EMRA P+NTLNPQRTAMVVADFVK G+IS PADLRY
Sbjct: 240  CSSMQGKFVAGPLLSIVHVCCVIEEMRATPVNTLNPQRTAMVVADFVKTGKISSPADLRY 299

Query: 978  REDLLFPARIIEEAGSVKVGRPLHKVVKPSKLSRLRDIFPEEKFLISRGSKCTDMVLEHN 1157
             EDLLFP R+IE AG+VKVG+ LH+ V+PSKL  L++IFP EKF++S G+K TD+VLE N
Sbjct: 300  HEDLLFPGRLIENAGNVKVGQALHRAVRPSKLRELKEIFPGEKFILSPGNKWTDLVLEQN 359

Query: 1158 ATGEDALRGWLVAAYAASMEKPGYGSSEIILKDAYEKMQTLFPSFLSELKLKGWHTDRFL 1337
            A+GEDALR WLVAAYA+SM+K  + S+ + L+DAYEKM ++F  FLSEL+ KGWHTDRFL
Sbjct: 360  ASGEDALRAWLVAAYASSMKKSSHESTSVTLQDAYEKMNSVFDPFLSELQAKGWHTDRFL 419

Query: 1338 DGTGNRFAW 1364
            DGTG+RF+W
Sbjct: 420  DGTGSRFSW 428


>ref|XP_002524618.1| conserved hypothetical protein [Ricinus communis]
            gi|223536171|gb|EEF37826.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 436

 Score =  663 bits (1711), Expect = 0.0
 Identities = 332/436 (76%), Positives = 375/436 (86%), Gaps = 7/436 (1%)
 Frame = +3

Query: 78   MNVLAKIKITKKVEEISA-------QQRPVLWIENFDTVSRQYQFDSQGTLSVKVVDDSR 236
            MN+L  IK+ KK  + +         + PV WIE  D+VSR +QF   G +S+KV+DDSR
Sbjct: 1    MNLLNTIKMQKKEPDKAPLLPPPPLPELPVHWIETSDSVSRHFQFQPDGRISMKVIDDSR 60

Query: 237  PVIHKVVESFLNKFFPSGYPYSVHEGYLRYSQFRVLQHFTSAALSVLSTQSLLFAAGLRP 416
             + H+VVESF NKFFPSGYPYSV+EGYLRY+QFR LQH +SAALSVLSTQSLLFAAGLRP
Sbjct: 61   SMFHRVVESFQNKFFPSGYPYSVNEGYLRYTQFRALQHLSSAALSVLSTQSLLFAAGLRP 120

Query: 417  TPAQATAVSWVLKDGMQHVGKLICSNLGARMDSEPKSWRILADVLYDLGTGLEVLSPLCP 596
            TPAQATAVSWVLKDGMQHVGKLICSNLGARMDSEPK WRILADVLYDLGTGLEVLSPLCP
Sbjct: 121  TPAQATAVSWVLKDGMQHVGKLICSNLGARMDSEPKRWRILADVLYDLGTGLEVLSPLCP 180

Query: 597  QLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAMSTLANVLGIGAG 776
             LFLE+AGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEA+STL NV+G+G G
Sbjct: 181  HLFLEVAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGLGVG 240

Query: 777  IYLASTVCSSIQGKLVVGPLLSAVHVYCVCQEMRAAPINTLNPQRTAMVVADFVKDGQIS 956
            I LASTVCSSIQGKLVVGPLLS +HV+ V +EMRAAP+NTLNPQRTAM+VAD+VK G+IS
Sbjct: 241  IQLASTVCSSIQGKLVVGPLLSILHVFSVVEEMRAAPVNTLNPQRTAMIVADYVKAGKIS 300

Query: 957  GPADLRYREDLLFPARIIEEAGSVKVGRPLHKVVKPSKLSRLRDIFPEEKFLISRGSKCT 1136
             PADLRYREDL+FP R+IE+AG+VKVGR LHK   PSK+  L+DIFPEEKFL++RG+  T
Sbjct: 301  SPADLRYREDLIFPGRLIEDAGNVKVGRALHKAFTPSKVHELKDIFPEEKFLLNRGNTWT 360

Query: 1137 DMVLEHNATGEDALRGWLVAAYAASMEKPGYGSSEIILKDAYEKMQTLFPSFLSELKLKG 1316
            DMVLE NA+GEDALRGWLVAAYA SMEK  +  +  +L+DAYEKM + F SFLSEL+ KG
Sbjct: 361  DMVLEQNASGEDALRGWLVAAYATSMEKSSHMCTPSVLQDAYEKMNSTFDSFLSELQAKG 420

Query: 1317 WHTDRFLDGTGNRFAW 1364
            WHTDRFLDG G+RFAW
Sbjct: 421  WHTDRFLDGVGSRFAW 436


>ref|NP_001189649.1| uncharacterized protein [Arabidopsis thaliana]
            gi|330253412|gb|AEC08506.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 432

 Score =  640 bits (1650), Expect = 0.0
 Identities = 316/432 (73%), Positives = 366/432 (84%), Gaps = 3/432 (0%)
 Frame = +3

Query: 78   MNVLAKIKITKKVEEI---SAQQRPVLWIENFDTVSRQYQFDSQGTLSVKVVDDSRPVIH 248
            M  L K+K+ KK + +   S +  PV W E  D+VS +YQF S G LS+KVVDD+RPV  
Sbjct: 1    MQFLEKVKLIKKEDPVMLKSPEDFPVYWFETSDSVSHRYQFQSDGHLSMKVVDDARPVPQ 60

Query: 249  KVVESFLNKFFPSGYPYSVHEGYLRYSQFRVLQHFTSAALSVLSTQSLLFAAGLRPTPAQ 428
            K+VESFLNKFFPSGYPYSV+EGYLRY+QFR LQHF+SAALSVLSTQSLLFAAGLRPTPAQ
Sbjct: 61   KMVESFLNKFFPSGYPYSVNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGLRPTPAQ 120

Query: 429  ATAVSWVLKDGMQHVGKLICSNLGARMDSEPKSWRILADVLYDLGTGLEVLSPLCPQLFL 608
            AT VSW+LKDGMQHVGKLICSNLGARMDSEPK WRILADVLYDLGTGLE++SPLCP LFL
Sbjct: 121  ATVVSWILKDGMQHVGKLICSNLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFL 180

Query: 609  EMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAMSTLANVLGIGAGIYLA 788
            EMAGLGNFAKGMA VAARATRLPIYSSFAKEGNLSD+FAKGEA+STL NV GIGAGI LA
Sbjct: 181  EMAGLGNFAKGMATVAARATRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAGIGAGIQLA 240

Query: 789  STVCSSIQGKLVVGPLLSAVHVYCVCQEMRAAPINTLNPQRTAMVVADFVKDGQISGPAD 968
            ST+CSS++GKLVVG +LS VHVY V ++MR  PINTLNPQRTA++VA+F+K G++  P D
Sbjct: 241  STICSSMEGKLVVGSILSVVHVYSVVEQMRGVPINTLNPQRTALIVANFLKTGKVPSPPD 300

Query: 969  LRYREDLLFPARIIEEAGSVKVGRPLHKVVKPSKLSRLRDIFPEEKFLISRGSKCTDMVL 1148
            LR++EDL+FP R I++AG+VKVGR LHK VKPS++ RL+ +F EEKFL+S G   TDMVL
Sbjct: 301  LRFQEDLMFPERPIQDAGNVKVGRALHKAVKPSEVQRLKQVFVEEKFLLSHGKSWTDMVL 360

Query: 1149 EHNATGEDALRGWLVAAYAASMEKPGYGSSEIILKDAYEKMQTLFPSFLSELKLKGWHTD 1328
            EH+ATGEDALRGWLVAAY  SM K      +IIL+DAY+KM  +F  FLS+++ KGW+TD
Sbjct: 361  EHDATGEDALRGWLVAAYVKSMTKIYNDPDDIILQDAYDKMNDVFNPFLSQVQAKGWYTD 420

Query: 1329 RFLDGTGNRFAW 1364
            RFLDGTG RFAW
Sbjct: 421  RFLDGTGTRFAW 432


Top