BLASTX nr result

ID: Coptis23_contig00003698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003698
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39030.3| unnamed protein product [Vitis vinifera]               93   1e-35
ref|XP_002273016.1| PREDICTED: probable LRR receptor-like serine...    93   1e-35
ref|XP_004139892.1| PREDICTED: probable LRR receptor-like serine...    91   2e-35
emb|CAN73906.1| hypothetical protein VITISV_029158 [Vitis vinifera]   118   4e-25
gb|EAY95562.1| hypothetical protein OsI_17410 [Oryza sativa Indi...   106   2e-21

>emb|CBI39030.3| unnamed protein product [Vitis vinifera]
          Length = 2282

 Score = 93.2 bits (230), Expect(2) = 1e-35
 Identities = 44/54 (81%), Positives = 47/54 (87%)
 Frame = +1

Query: 247 VTSHQGKSQFVAEISTISAVQHRNLVKLYGCCIEGSNRLLVYEYHKKKSLDQVL 408
           V SHQGKSQF+ EI+TISAVQHRNLVKLYGCCIEG  RLLVYEY + KSLDQ L
Sbjct: 733 VASHQGKSQFITEIATISAVQHRNLVKLYGCCIEGDKRLLVYEYLENKSLDQAL 786



 Score = 81.6 bits (200), Expect(2) = 1e-35
 Identities = 41/65 (63%), Positives = 47/65 (72%)
 Frame = +2

Query: 50  RLSVLHLERTAELLGIDNRLKNFNYAELRTATGDFNSTNKLGEGGFGPVYKGILSDGREV 229
           ++   ++    ELLGI  R   F YAELRTAT DFN TNKLGEGGFGPVYKG L+D R V
Sbjct: 667 KMRASNINEDEELLGIGPRPNTFTYAELRTATEDFNPTNKLGEGGFGPVYKGKLNDERAV 726

Query: 230 AVKKL 244
           AVK+L
Sbjct: 727 AVKQL 731



 Score = 79.0 bits (193), Expect(2) = 9e-30
 Identities = 38/54 (70%), Positives = 44/54 (81%)
 Frame = +1

Query: 247  VTSHQGKSQFVAEISTISAVQHRNLVKLYGCCIEGSNRLLVYEYHKKKSLDQVL 408
            V S  GKSQF+ EI+TISAVQHRNLVKLYG CI+G+ RLLVYEY + +SLD  L
Sbjct: 1996 VASQHGKSQFITEIATISAVQHRNLVKLYGFCIKGNRRLLVYEYLENRSLDHSL 2049



 Score = 76.3 bits (186), Expect(2) = 9e-30
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = +2

Query: 65   HLERTAELLGIDNRLKNFNYAELRTATGDFNSTNKLGEGGFGPVYKGILSDGREVAVKKL 244
            +L +   LLG+  R   F YAELRTAT +F++TNKLGEGGFG VYKG L DGR VAVK+L
Sbjct: 1935 NLNKDIVLLGVGPRPNTFRYAELRTATENFSATNKLGEGGFGSVYKGTLPDGRVVAVKEL 1994


>ref|XP_002273016.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1048

 Score = 93.2 bits (230), Expect(2) = 1e-35
 Identities = 44/54 (81%), Positives = 47/54 (87%)
 Frame = +1

Query: 247 VTSHQGKSQFVAEISTISAVQHRNLVKLYGCCIEGSNRLLVYEYHKKKSLDQVL 408
           V SHQGKSQF+ EI+TISAVQHRNLVKLYGCCIEG  RLLVYEY + KSLDQ L
Sbjct: 733 VASHQGKSQFITEIATISAVQHRNLVKLYGCCIEGDKRLLVYEYLENKSLDQAL 786



 Score = 81.6 bits (200), Expect(2) = 1e-35
 Identities = 41/65 (63%), Positives = 47/65 (72%)
 Frame = +2

Query: 50  RLSVLHLERTAELLGIDNRLKNFNYAELRTATGDFNSTNKLGEGGFGPVYKGILSDGREV 229
           ++   ++    ELLGI  R   F YAELRTAT DFN TNKLGEGGFGPVYKG L+D R V
Sbjct: 667 KMRASNINEDEELLGIGPRPNTFTYAELRTATEDFNPTNKLGEGGFGPVYKGKLNDERAV 726

Query: 230 AVKKL 244
           AVK+L
Sbjct: 727 AVKQL 731


>ref|XP_004139892.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Cucumis sativus]
           gi|449493071|ref|XP_004159184.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g56130-like [Cucumis sativus]
          Length = 1122

 Score = 90.5 bits (223), Expect(2) = 2e-35
 Identities = 44/54 (81%), Positives = 47/54 (87%)
 Frame = +1

Query: 247 VTSHQGKSQFVAEISTISAVQHRNLVKLYGCCIEGSNRLLVYEYHKKKSLDQVL 408
           V SHQGKSQFVAEI+TISAVQHRNLVKLYGCCIE   RLLVYE+ + KSLDQ L
Sbjct: 815 VASHQGKSQFVAEIATISAVQHRNLVKLYGCCIEADKRLLVYEFLENKSLDQSL 868



 Score = 84.0 bits (206), Expect(2) = 2e-35
 Identities = 41/54 (75%), Positives = 46/54 (85%)
 Frame = +2

Query: 83  ELLGIDNRLKNFNYAELRTATGDFNSTNKLGEGGFGPVYKGILSDGREVAVKKL 244
           ELLGID R   F+Y+ELR AT DFNS+NKLGEGGFGPVYKG L+DGR VAVK+L
Sbjct: 760 ELLGIDIRPYTFSYSELRDATNDFNSSNKLGEGGFGPVYKGTLNDGRVVAVKQL 813


>emb|CAN73906.1| hypothetical protein VITISV_029158 [Vitis vinifera]
          Length = 682

 Score =  118 bits (296), Expect = 4e-25
 Identities = 69/150 (46%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
 Frame = +1

Query: 1   KGTCCIPVQGYYGPSISAISVTLGTNCRAPRNRQQAKK--------------FQLC*VEN 138
           KGTCC+P QG YGPSISAIS T       P      KK              F    ++N
Sbjct: 283 KGTCCVPAQGTYGPSISAISATPNFEPTVPNTAPNGKKNRTELLGMDARPYTFSYAELKN 342

Query: 139 CYRRLQLNK*VRRGRIWTSLQGDSV*WKRSSCEKTLVTSHQGKSQFVAEISTISAVQHRN 318
                  +  +  G      +G     +  + ++  V+SHQGK+QFV EI+TISAVQHRN
Sbjct: 343 ATGDFSPSNKLGEGGFGPVYKGTLSDGRVVAVKQLSVSSHQGKNQFVTEIATISAVQHRN 402

Query: 319 LVKLYGCCIEGSNRLLVYEYHKKKSLDQVL 408
           LVKLYGCCIEG NR LVYEY + KSLDQ L
Sbjct: 403 LVKLYGCCIEGVNRSLVYEYLENKSLDQAL 432


>gb|EAY95562.1| hypothetical protein OsI_17410 [Oryza sativa Indica Group]
          Length = 917

 Score =  106 bits (264), Expect = 2e-21
 Identities = 65/158 (41%), Positives = 85/158 (53%), Gaps = 22/158 (13%)
 Frame = +1

Query: 1   KGTCCIPVQGYYGPSISAISVT-------------LGTNCRAPRNRQQAKKFQLC*VENC 141
           KGTCCIP QGYYGP+ISA+SVT             +    R   + +Q + + +    N 
Sbjct: 516 KGTCCIPGQGYYGPTISALSVTPAVLGLVALVAIFMWRQKRRKLSLEQQELYSIVGRPNV 575

Query: 142 YRRLQL---------NK*VRRGRIWTSLQGDSV*WKRSSCEKTLVTSHQGKSQFVAEIST 294
           +   +L         N  +  G      +G     +  + ++   TSHQGK QF  EI T
Sbjct: 576 FSYSELRSATENFSSNNRLGEGGYGAVYKGKLNDGRVVAVKQLSQTSHQGKKQFATEIET 635

Query: 295 ISAVQHRNLVKLYGCCIEGSNRLLVYEYHKKKSLDQVL 408
           IS VQHRNLVKLYGCC+EG+N LLVYEY +  SLD+ L
Sbjct: 636 ISRVQHRNLVKLYGCCLEGNNPLLVYEYMENGSLDKAL 673


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