BLASTX nr result
ID: Coptis23_contig00003692
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003692
(1847 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACC60972.1| phytochrome E [Vitis riparia] 634 e-179
emb|CBI30813.3| unnamed protein product [Vitis vinifera] 632 e-179
ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera] gi... 632 e-179
emb|CAN62723.1| hypothetical protein VITISV_030984 [Vitis vinifera] 626 e-177
ref|XP_002519749.1| phytochrome B, putative [Ricinus communis] g... 625 e-177
>gb|ACC60972.1| phytochrome E [Vitis riparia]
Length = 1124
Score = 634 bits (1634), Expect = e-179
Identities = 308/469 (65%), Positives = 379/469 (80%)
Frame = -2
Query: 1846 ATEAMGKSLVGELVHEESRLTIESHLKRALQGEEDDSVELRLKTFGLQKDKRVLFIVANA 1667
A EAMGKSLV E+VHE+ R +++ L RALQG+ED +VEL+LK FGL + L+IV NA
Sbjct: 650 AKEAMGKSLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKKFGLNQQDSALYIVVNA 709
Query: 1666 CTSKDYTNNVIGVCFVGQDVTEEKVVMDKFVRLQGDYKAIIQSLNPLIPPIFASDENACC 1487
CTS+DYTN+++GVCFVGQD+T EK+VMDKF+RLQGDYKAI+QSLNPLIPPIFASD NACC
Sbjct: 710 CTSRDYTNDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQSLNPLIPPIFASDGNACC 769
Query: 1486 SEWNAAMEELTGYKRGDIIGKMLLNEIFGGICRLEGQDSLTKFMILLHCAIGGQDTENFP 1307
SEWN ++E+LTG+ R ++I KML E+FGG+C L+ QD+LT+F ILL+ AI GQDTE FP
Sbjct: 770 SEWNTSLEKLTGWMRHEVIRKMLPGEVFGGLCPLKSQDTLTRFTILLYQAISGQDTEKFP 829
Query: 1306 FAFYDKKGKCVEVLLTANKRTDKSGRGTGCFCFLQTQVPDLQQTLEVQREEERKCFAKAK 1127
F F+DK GK VEVLLTANKRTD +G GCFCFLQ PD Q L E R+CF+K K
Sbjct: 830 FGFFDKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQGLG-DGPEYRECFSKFK 888
Query: 1126 ELAYIRQEMKNPLNGIIFTHKLLETNAVSDVQKQFLETSDACERQMMTIMEDVDLGCIED 947
ELAYIRQEMKNPLNGI FTHKLLET A S QKQFLETS+ACERQMM+I+ D+D+G IE+
Sbjct: 889 ELAYIRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEE 948
Query: 946 GTMELNMESFLLGSVMDAIVSQVMILLSEKKLQLIWKIPEEIKTLSLYGDQIRLQQILAD 767
G+MELN+E FLLG+V+DA+VSQVM+LL EKKLQL+ +IPEEIKTL L GDQI+LQQ+L+D
Sbjct: 949 GSMELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSD 1008
Query: 766 FLLNVIRHAPSPDSWVEIKVVPSFKLIQEDIELVHLQFRMTHPGKGLPSELVKNMFEAGT 587
FL N++ HAPS D W+EIK+ K+IQ+ E +HLQFRMTH G+GLP +L+++MFE G
Sbjct: 1009 FLHNIVHHAPSSDGWIEIKISTGLKMIQDFNEFIHLQFRMTHIGQGLPPDLIQDMFEGGD 1068
Query: 586 RWTPQEGLALNMSCKLLKIMNGDVHYVRESTKCYFIIDIEFQSFRNRCK 440
+W QEGL LN+S KLL MNG V YVRE KCYF+++I+ ++ R R K
Sbjct: 1069 QWNTQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLVEIDLKNRRAREK 1117
>emb|CBI30813.3| unnamed protein product [Vitis vinifera]
Length = 877
Score = 632 bits (1631), Expect = e-179
Identities = 309/469 (65%), Positives = 377/469 (80%)
Frame = -2
Query: 1846 ATEAMGKSLVGELVHEESRLTIESHLKRALQGEEDDSVELRLKTFGLQKDKRVLFIVANA 1667
A EAMGKSLV E+VHE+ R +++ L RALQG+ED +VEL+LK FGL + L+IV NA
Sbjct: 403 AKEAMGKSLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNA 462
Query: 1666 CTSKDYTNNVIGVCFVGQDVTEEKVVMDKFVRLQGDYKAIIQSLNPLIPPIFASDENACC 1487
CTS+DYTN+++GVCFVGQD+T EK+VMDKF+RLQGDYKAI+Q LNPLIPPIFASD NACC
Sbjct: 463 CTSRDYTNDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQCLNPLIPPIFASDGNACC 522
Query: 1486 SEWNAAMEELTGYKRGDIIGKMLLNEIFGGICRLEGQDSLTKFMILLHCAIGGQDTENFP 1307
SEWN ++E+LTG R ++I KML E+FGG+C L+ QD+LT+F ILL+ AI GQDTE FP
Sbjct: 523 SEWNTSLEKLTGCMRHEVIRKMLPGEVFGGLCPLKSQDTLTRFTILLYQAISGQDTEKFP 582
Query: 1306 FAFYDKKGKCVEVLLTANKRTDKSGRGTGCFCFLQTQVPDLQQTLEVQREEERKCFAKAK 1127
F F+DK GK VEVLLTANKRTD +G GCFCFLQ PD Q L E R+CF+K K
Sbjct: 583 FGFFDKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQGLG-HGPEYRECFSKFK 641
Query: 1126 ELAYIRQEMKNPLNGIIFTHKLLETNAVSDVQKQFLETSDACERQMMTIMEDVDLGCIED 947
ELAYIRQEMKNPLNGI FTHKLLET A S QKQFLETS+ACERQMM+I+ D+D+G IE+
Sbjct: 642 ELAYIRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEE 701
Query: 946 GTMELNMESFLLGSVMDAIVSQVMILLSEKKLQLIWKIPEEIKTLSLYGDQIRLQQILAD 767
G+MELN+E FLLG+V+DA+VSQVM+LL EKKLQL+ +IPEEIKTL L GDQI+LQQ+L+D
Sbjct: 702 GSMELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSD 761
Query: 766 FLLNVIRHAPSPDSWVEIKVVPSFKLIQEDIELVHLQFRMTHPGKGLPSELVKNMFEAGT 587
FL N++ HAPS D W+EIK+ K+IQ+ E VHLQFRMTH G+GLP +L+++MFE G
Sbjct: 762 FLHNIVHHAPSSDGWIEIKISTGLKMIQDFNEFVHLQFRMTHIGQGLPPDLIQDMFEGGD 821
Query: 586 RWTPQEGLALNMSCKLLKIMNGDVHYVRESTKCYFIIDIEFQSFRNRCK 440
+W QEGL LN+S KLL MNG V YVRE KCYF++DI+ ++ R R K
Sbjct: 822 QWNTQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLVDIDLKNRRAREK 870
>ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera] gi|183239020|gb|ACC60968.1|
phytochrome E [Vitis vinifera]
Length = 1124
Score = 632 bits (1631), Expect = e-179
Identities = 309/469 (65%), Positives = 377/469 (80%)
Frame = -2
Query: 1846 ATEAMGKSLVGELVHEESRLTIESHLKRALQGEEDDSVELRLKTFGLQKDKRVLFIVANA 1667
A EAMGKSLV E+VHE+ R +++ L RALQG+ED +VEL+LK FGL + L+IV NA
Sbjct: 650 AKEAMGKSLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNA 709
Query: 1666 CTSKDYTNNVIGVCFVGQDVTEEKVVMDKFVRLQGDYKAIIQSLNPLIPPIFASDENACC 1487
CTS+DYTN+++GVCFVGQD+T EK+VMDKF+RLQGDYKAI+Q LNPLIPPIFASD NACC
Sbjct: 710 CTSRDYTNDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQCLNPLIPPIFASDGNACC 769
Query: 1486 SEWNAAMEELTGYKRGDIIGKMLLNEIFGGICRLEGQDSLTKFMILLHCAIGGQDTENFP 1307
SEWN ++E+LTG R ++I KML E+FGG+C L+ QD+LT+F ILL+ AI GQDTE FP
Sbjct: 770 SEWNTSLEKLTGCMRHEVIRKMLPGEVFGGLCPLKSQDTLTRFTILLYQAISGQDTEKFP 829
Query: 1306 FAFYDKKGKCVEVLLTANKRTDKSGRGTGCFCFLQTQVPDLQQTLEVQREEERKCFAKAK 1127
F F+DK GK VEVLLTANKRTD +G GCFCFLQ PD Q L E R+CF+K K
Sbjct: 830 FGFFDKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQGLG-HGPEYRECFSKFK 888
Query: 1126 ELAYIRQEMKNPLNGIIFTHKLLETNAVSDVQKQFLETSDACERQMMTIMEDVDLGCIED 947
ELAYIRQEMKNPLNGI FTHKLLET A S QKQFLETS+ACERQMM+I+ D+D+G IE+
Sbjct: 889 ELAYIRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEE 948
Query: 946 GTMELNMESFLLGSVMDAIVSQVMILLSEKKLQLIWKIPEEIKTLSLYGDQIRLQQILAD 767
G+MELN+E FLLG+V+DA+VSQVM+LL EKKLQL+ +IPEEIKTL L GDQI+LQQ+L+D
Sbjct: 949 GSMELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLSD 1008
Query: 766 FLLNVIRHAPSPDSWVEIKVVPSFKLIQEDIELVHLQFRMTHPGKGLPSELVKNMFEAGT 587
FL N++ HAPS D W+EIK+ K+IQ+ E VHLQFRMTH G+GLP +L+++MFE G
Sbjct: 1009 FLHNIVHHAPSSDGWIEIKISTGLKMIQDFNEFVHLQFRMTHIGQGLPPDLIQDMFEGGD 1068
Query: 586 RWTPQEGLALNMSCKLLKIMNGDVHYVRESTKCYFIIDIEFQSFRNRCK 440
+W QEGL LN+S KLL MNG V YVRE KCYF++DI+ ++ R R K
Sbjct: 1069 QWNTQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLVDIDLKNRRAREK 1117
>emb|CAN62723.1| hypothetical protein VITISV_030984 [Vitis vinifera]
Length = 1162
Score = 626 bits (1614), Expect = e-177
Identities = 316/515 (61%), Positives = 393/515 (76%), Gaps = 2/515 (0%)
Frame = -2
Query: 1846 ATEAMGKSLVGELVHEESRLTIESHLKRALQGEEDDSVELRLKTFGLQKDKRVLFIVANA 1667
A EAMGKSLV E+VHE+ R +++ L RALQG+ED +VEL+LK FGL + L+IV NA
Sbjct: 650 AKEAMGKSLVDEIVHEDLRGAVDNLLCRALQGKEDKNVELKLKNFGLNQQDSALYIVVNA 709
Query: 1666 CTSKDYTNNVIGVCFVGQDVTEEKVVMDKFVRLQGDYKAIIQSLNPLIPPIFASDENACC 1487
C S+DYTN+++GVCFVGQD+T EK+VMDKF+RLQGDYKAI+Q LNPLIPPIFASD NACC
Sbjct: 710 CXSRDYTNDIVGVCFVGQDITSEKIVMDKFIRLQGDYKAIVQXLNPLIPPIFASDGNACC 769
Query: 1486 SEWNAAMEELTGYKRGDIIGKMLLNEIFGGICRLEGQDSLTKFMILLHCAIGGQDTENFP 1307
SEWN ++E+LTG R ++I KML E+FGG+C L+ QD+LT+F ILL+ AI GQDTE FP
Sbjct: 770 SEWNTSLEKLTGXMRHEVIRKMLPGEVFGGLCPLKSQDTLTRFTILLYQAISGQDTEKFP 829
Query: 1306 FAFYDKKGKCVEVLLTANKRTDKSGRGTGCFCFLQTQVPDLQQTLEVQREEERKCFAKAK 1127
F F+DK GK VEVLLTANKRTD +G GCFCFLQ PD Q L E R+CF+K K
Sbjct: 830 FGFFDKSGKLVEVLLTANKRTDANGNVIGCFCFLQIDTPDKHQGLG-HGPEYRECFSKFK 888
Query: 1126 ELAYIRQEMKNPLNGIIFTHKLLETNAVSDVQKQFLETSDACERQMMTIMEDVDLGCIED 947
ELAYIRQEMKNPLNGI FTHKLLET A S QKQFLETS+ACERQMM+I+ D+D+G IE+
Sbjct: 889 ELAYIRQEMKNPLNGIRFTHKLLETTATSVYQKQFLETSEACERQMMSIIADIDMGIIEE 948
Query: 946 G-TMELNMESFLLGSVMDAIVSQVMILLSEKKLQLIWKIPEEIKTLSLYGDQIRLQQILA 770
G +MELN+E FLLG+V+DA+VSQVM+LL EKKLQL+ +IPEEIKTL L GDQI+LQQ+L+
Sbjct: 949 GSSMELNVEEFLLGNVLDAVVSQVMMLLKEKKLQLVCEIPEEIKTLPLSGDQIKLQQVLS 1008
Query: 769 DFLLNVIRHAPSPDSWVEIKVVPSFKLIQEDIELVHLQFRMTHPGKGLPSELVKNMFEAG 590
DFL N++ HAPS D W+EIK+ K+IQ+ E +HLQFRMTH G+GLP +L+++MFE G
Sbjct: 1009 DFLHNIVHHAPSSDGWIEIKISTGLKMIQDFNEFIHLQFRMTHIGQGLPPDLIQDMFEGG 1068
Query: 589 TRWTPQEGLALNMSCKLLKIMNGDVHYVRESTKCYFIIDIEFQSFRNRCK*NN-RPHWQI 413
+W QEGL LN+S KLL MNG V YVRE KCYF++DI+ ++ R R K + W +
Sbjct: 1069 DQWNTQEGLGLNLSRKLLSAMNGRVQYVREHGKCYFLVDIDLKNRRAREKGKQIQVTWNL 1128
Query: 412 PLIS*SPLYVTYGRLKDLVSSRHLERLVRPELSLI 308
I SP + G + D + +L + + LI
Sbjct: 1129 G-IDYSPCFAKLGLVYDYLYYDYLINMAGCQSHLI 1162
>ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
gi|223541166|gb|EEF42722.1| phytochrome B, putative
[Ricinus communis]
Length = 1131
Score = 625 bits (1613), Expect = e-177
Identities = 306/469 (65%), Positives = 379/469 (80%)
Frame = -2
Query: 1846 ATEAMGKSLVGELVHEESRLTIESHLKRALQGEEDDSVELRLKTFGLQKDKRVLFIVANA 1667
A+EAMGKSLV E+VH++S +ES L RALQGEED +VEL+L+ FGL + +F+VANA
Sbjct: 650 ASEAMGKSLVREVVHKDSYEFVESLLCRALQGEEDKNVELKLRKFGLHQQNSAVFVVANA 709
Query: 1666 CTSKDYTNNVIGVCFVGQDVTEEKVVMDKFVRLQGDYKAIIQSLNPLIPPIFASDENACC 1487
CTS+DY NNVIGVCFVGQDVT EK+VMDKF+RLQGDYK II+SLNPLIPPIFASDENACC
Sbjct: 710 CTSRDYANNVIGVCFVGQDVTSEKIVMDKFLRLQGDYKVIIESLNPLIPPIFASDENACC 769
Query: 1486 SEWNAAMEELTGYKRGDIIGKMLLNEIFGGICRLEGQDSLTKFMILLHCAIGGQDTENFP 1307
EWNAAME LTG R ++IGKML EIFGG+CRL+ QD+LTKFMILL+ + QDT+ FP
Sbjct: 770 CEWNAAMERLTGRTRQEVIGKMLPGEIFGGLCRLKDQDTLTKFMILLYRGLSDQDTDKFP 829
Query: 1306 FAFYDKKGKCVEVLLTANKRTDKSGRGTGCFCFLQTQVPDLQQTLEVQREEERKCFAKAK 1127
F F++++GK VEV LTANKRTD G+ GCFCFLQ PDLQQTL+ ++E+++ K K
Sbjct: 830 FGFFNRQGKFVEVFLTANKRTDADGKTIGCFCFLQVIGPDLQQTLDEHKQEDQESLLKLK 889
Query: 1126 ELAYIRQEMKNPLNGIIFTHKLLETNAVSDVQKQFLETSDACERQMMTIMEDVDLGCIED 947
+LAYIR+EMK+PL+GI FTHKLLE A S+ QKQFLETSDACE+Q+MTI+ED+DL +E+
Sbjct: 890 QLAYIREEMKSPLSGIRFTHKLLEDTATSEHQKQFLETSDACEKQIMTIIEDIDLAKLEE 949
Query: 946 GTMELNMESFLLGSVMDAIVSQVMILLSEKKLQLIWKIPEEIKTLSLYGDQIRLQQILAD 767
G +EL +E F L +V+DAIVSQ+M+LL E+ +QL +IPEEIKT+S+YGDQIRLQ +L+D
Sbjct: 950 GKIELKVEEFFLVNVLDAIVSQIMLLLRERSIQLFHEIPEEIKTVSVYGDQIRLQLVLSD 1009
Query: 766 FLLNVIRHAPSPDSWVEIKVVPSFKLIQEDIELVHLQFRMTHPGKGLPSELVKNMFEAGT 587
FLL+V+RHAPSPD WVEIKV KL+Q+ E + +Q RMTHPG+GLPS L ++MFE G
Sbjct: 1010 FLLSVVRHAPSPDGWVEIKVSSGLKLMQDSHEFLRVQIRMTHPGQGLPSALTEDMFEEGN 1069
Query: 586 RWTPQEGLALNMSCKLLKIMNGDVHYVRESTKCYFIIDIEFQSFRNRCK 440
WT QEGLAL +S KLL MNG VHY RE KC+F+ID+E + +NR K
Sbjct: 1070 CWTTQEGLALKLSRKLLHQMNGHVHYTREHNKCFFLIDLELK-LKNRQK 1117