BLASTX nr result

ID: Coptis23_contig00003688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003688
         (1622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28315.3| unnamed protein product [Vitis vinifera]              578   e-162
ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop...   578   e-162
ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228...   569   e-160
ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218...   569   e-160
ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|2...   562   e-157

>emb|CBI28315.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  578 bits (1491), Expect = e-162
 Identities = 284/366 (77%), Positives = 320/366 (87%), Gaps = 2/366 (0%)
 Frame = -1

Query: 1514 DVEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSR 1335
            ++ED++ES+KHAELLA+PPHGSEVYVGGI  DASE+DLK FCESVGEVTEVR+MKGKDS 
Sbjct: 34   EIEDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMKGKDSG 93

Query: 1334 ENKGYAFVTFRTKDLAAKAIEDLNNTEFEGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKK 1155
            ENKG+AFVTFR  +LA+KAIE+LNNTEF+G++IKCSTSQAKH+LFIGNVPRSWGE+D+KK
Sbjct: 94   ENKGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGEEDIKK 153

Query: 1154 IVTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVS 975
            +VTEIGPGV A+EL+KD +NSS NRGFAFIDYYNHACAEYSRQKM  PKFKL++NAPTVS
Sbjct: 154  VVTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNNAPTVS 213

Query: 974  WADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFG 795
            WADPKNA+SS ASQVKAVYVKNLPKN+ QDQL++LFEHHG+ITKVVLPPAK GQEK+R G
Sbjct: 214  WADPKNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKITKVVLPPAKSGQEKSRIG 273

Query: 794  FVHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANG--SAQKSSLLPSYPPRMX 621
            FVHFAERSSAMKALKNTEKYE+DGQVLECSLAKPQ D K+ G  ++QKS LL SYPPR+ 
Sbjct: 274  FVHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSVGGSNSQKSGLLSSYPPRV- 332

Query: 620  XXXXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGA 441
                                  GF QPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPGA
Sbjct: 333  ---GYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGA 389

Query: 440  QPHTPP 423
            QPHTPP
Sbjct: 390  QPHTPP 395


>ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
            vinifera]
          Length = 503

 Score =  578 bits (1489), Expect = e-162
 Identities = 284/365 (77%), Positives = 319/365 (87%), Gaps = 2/365 (0%)
 Frame = -1

Query: 1511 VEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSRE 1332
            +ED++ES+KHAELLA+PPHGSEVYVGGI  DASE+DLK FCESVGEVTEVR+MKGKDS E
Sbjct: 104  IEDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMKGKDSGE 163

Query: 1331 NKGYAFVTFRTKDLAAKAIEDLNNTEFEGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKKI 1152
            NKG+AFVTFR  +LA+KAIE+LNNTEF+G++IKCSTSQAKH+LFIGNVPRSWGE+D+KK+
Sbjct: 164  NKGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGEEDIKKV 223

Query: 1151 VTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVSW 972
            VTEIGPGV A+EL+KD +NSS NRGFAFIDYYNHACAEYSRQKM  PKFKL++NAPTVSW
Sbjct: 224  VTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNNAPTVSW 283

Query: 971  ADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFGF 792
            ADPKNA+SS ASQVKAVYVKNLPKN+ QDQL++LFEHHG+ITKVVLPPAK GQEK+R GF
Sbjct: 284  ADPKNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKITKVVLPPAKSGQEKSRIGF 343

Query: 791  VHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANG--SAQKSSLLPSYPPRMXX 618
            VHFAERSSAMKALKNTEKYE+DGQVLECSLAKPQ D K+ G  ++QKS LL SYPPR+  
Sbjct: 344  VHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQADQKSVGGSNSQKSGLLSSYPPRV-- 401

Query: 617  XXXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGAQ 438
                                 GF QPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPGAQ
Sbjct: 402  --GYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGAQ 459

Query: 437  PHTPP 423
            PHTPP
Sbjct: 460  PHTPP 464


>ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228216 [Cucumis sativus]
          Length = 828

 Score =  569 bits (1466), Expect = e-160
 Identities = 277/365 (75%), Positives = 319/365 (87%), Gaps = 1/365 (0%)
 Frame = -1

Query: 1511 VEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSRE 1332
            + D++E++KHAELLA+PPHGSEVYVGGIP D+SE DL+ FCES+GEVTEVR+M+ K+S E
Sbjct: 419  INDEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNE 478

Query: 1331 NKGYAFVTFRTKDLAAKAIEDLNNTEFEGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKKI 1152
            NKG+AFVTFR+ +LA+KAI++LNNTEF+GK+IKCS+SQAKH+LFIGNVPRSWGE+DLKK+
Sbjct: 479  NKGFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKV 538

Query: 1151 VTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVSW 972
            VTEIGPGV A+EL+KD +N+S NRGFAFIDYYNHACAEYSRQKM  PKFKL+ NAPTVSW
Sbjct: 539  VTEIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSW 598

Query: 971  ADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFGF 792
            ADPKNA+SSAASQVKAVYVKNLPKNV Q+QL++LF+HHG+ITKVVLPPAK GQEKNR GF
Sbjct: 599  ADPKNADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGF 658

Query: 791  VHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANGS-AQKSSLLPSYPPRMXXX 615
            VHF+ERSSAMKALKNTEKYELDGQVLECSLAKPQ D K+ GS +QKS LLP+YPPR+   
Sbjct: 659  VHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRV--- 715

Query: 614  XXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGAQP 435
                                GFGQPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPG+Q 
Sbjct: 716  -GYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM 774

Query: 434  HTPPP 420
             TPPP
Sbjct: 775  LTPPP 779


>ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218373 [Cucumis sativus]
          Length = 784

 Score =  569 bits (1466), Expect = e-160
 Identities = 277/365 (75%), Positives = 319/365 (87%), Gaps = 1/365 (0%)
 Frame = -1

Query: 1511 VEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGEVTEVRMMKGKDSRE 1332
            + D++E++KHAELLA+PPHGSEVYVGGIP D+SE DL+ FCES+GEVTEVR+M+ K+S E
Sbjct: 375  INDEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNE 434

Query: 1331 NKGYAFVTFRTKDLAAKAIEDLNNTEFEGKRIKCSTSQAKHKLFIGNVPRSWGEDDLKKI 1152
            NKG+AFVTFR+ +LA+KAI++LNNTEF+GK+IKCS+SQAKH+LFIGNVPRSWGE+DLKK+
Sbjct: 435  NKGFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKV 494

Query: 1151 VTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSIPKFKLESNAPTVSW 972
            VTEIGPGV A+EL+KD +N+S NRGFAFIDYYNHACAEYSRQKM  PKFKL+ NAPTVSW
Sbjct: 495  VTEIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSW 554

Query: 971  ADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVLPPAKPGQEKNRFGF 792
            ADPKNA+SSAASQVKAVYVKNLPKNV Q+QL++LF+HHG+ITKVVLPPAK GQEKNR GF
Sbjct: 555  ADPKNADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGF 614

Query: 791  VHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANGS-AQKSSLLPSYPPRMXXX 615
            VHF+ERSSAMKALKNTEKYELDGQVLECSLAKPQ D K+ GS +QKS LLP+YPPR+   
Sbjct: 615  VHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRV--- 671

Query: 614  XXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLPDGRIGYVLQQPGAQP 435
                                GFGQPLIYGRGPTP+GMAMMPMLLPDGRIGYVLQQPG+Q 
Sbjct: 672  -GYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM 730

Query: 434  HTPPP 420
             TPPP
Sbjct: 731  LTPPP 735


>ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|222854448|gb|EEE91995.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  562 bits (1448), Expect = e-157
 Identities = 273/380 (71%), Positives = 324/380 (85%), Gaps = 2/380 (0%)
 Frame = -1

Query: 1553 QASPGADQDMKASDVEDDEESRKHAELLAIPPHGSEVYVGGIPHDASEKDLKGFCESVGE 1374
            +AS  AD    +   E+++E RKH+ELLA+PPHGSEVY+GGIP DASE+DLK FCES+GE
Sbjct: 34   EASDEADSPKGSDGDEEEDEHRKHSELLALPPHGSEVYLGGIPPDASEEDLKEFCESIGE 93

Query: 1373 VTEVRMMKGKDSRENKGYAFVTFRTKDLAAKAIEDLNNTEFEGKRIKCSTSQAKHKLFIG 1194
            VTE+R+MKGKDS E+KGYAFVTFRTK+LA+KAIE+LNNTEF+GK++KCSTSQA H+LFIG
Sbjct: 94   VTEIRIMKGKDSSESKGYAFVTFRTKELASKAIEELNNTEFKGKKVKCSTSQANHRLFIG 153

Query: 1193 NVPRSWGEDDLKKIVTEIGPGVNAIELLKDPQNSSRNRGFAFIDYYNHACAEYSRQKMSI 1014
            NVPR+WGE+D+KK V + GPGVN++ELLKDPQN SRNRGFAFI+YYNHACAEYSR+ MS 
Sbjct: 154  NVPRNWGEEDMKKAVKKTGPGVNSVELLKDPQNPSRNRGFAFIEYYNHACAEYSRKMMSS 213

Query: 1013 PKFKLESNAPTVSWADPKNAESSAASQVKAVYVKNLPKNVNQDQLRELFEHHGEITKVVL 834
            P+FKL+ NAPTVSWADPKNA SSAASQVKAVYVKNLP+++NQD+LR+LFEHHG++TKVVL
Sbjct: 214  PEFKLDDNAPTVSWADPKNAGSSAASQVKAVYVKNLPEDINQDRLRQLFEHHGKVTKVVL 273

Query: 833  PPAKPGQEKNRFGFVHFAERSSAMKALKNTEKYELDGQVLECSLAKPQNDGKANG--SAQ 660
            PPAKPG EK+RFGFVHFAERSSAMKALKNTEKY++DGQVL+CSLAKPQ D K++G  ++Q
Sbjct: 274  PPAKPGHEKSRFGFVHFAERSSAMKALKNTEKYKIDGQVLDCSLAKPQADLKSSGGPNSQ 333

Query: 659  KSSLLPSYPPRMXXXXXXXXXXXXXXXXXXXXXXXGFGQPLIYGRGPTPSGMAMMPMLLP 480
            KSS   S+PPR+                       GF QP+IYGRGPTP+GM+MMPMLLP
Sbjct: 334  KSSPHSSFPPRV----GYSLVGSSYGALGAGFGAAGFAQPVIYGRGPTPAGMSMMPMLLP 389

Query: 479  DGRIGYVLQQPGAQPHTPPP 420
            DGRIGYVLQQPG Q H+PPP
Sbjct: 390  DGRIGYVLQQPGMQMHSPPP 409


Top