BLASTX nr result

ID: Coptis23_contig00003678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003678
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631647.1| PREDICTED: guanine nucleotide-binding protei...   610   e-172
ref|XP_002313052.1| predicted protein [Populus trichocarpa] gi|2...   607   e-171
ref|XP_002306098.1| predicted protein [Populus trichocarpa] gi|2...   607   e-171
ref|XP_002509478.1| guanine nucleotide-binding protein beta, put...   602   e-170
gb|ACR77529.1| heterotrimeric G protein beta 2 subunit [Nicotian...   602   e-170

>ref|XP_003631647.1| PREDICTED: guanine nucleotide-binding protein subunit beta-2-like
            [Vitis vinifera] gi|297741450|emb|CBI32581.3| unnamed
            protein product [Vitis vinifera]
          Length = 377

 Score =  610 bits (1573), Expect = e-172
 Identities = 283/339 (83%), Positives = 310/339 (91%)
 Frame = +2

Query: 2    HVRSQSRTPVSFGPTDLVCCRTLQGHSGKVYSLDWTSEKNRIVSASQDGRLIIWNALTSQ 181
            + R+Q ++PV+FGPTDLVCCRTLQGH+GKVYSLDWT+EKNRIVSASQDGRLI+WNALTSQ
Sbjct: 39   YARAQGKSPVTFGPTDLVCCRTLQGHTGKVYSLDWTTEKNRIVSASQDGRLIVWNALTSQ 98

Query: 182  KTHAIKLPCAWVMTCTFSPSSHFVACGGLDNTCSIFNLNSPVDKDGNLPLSRMLSGHKGY 361
            KTHAIKLPCAWVMTC FSPS   VACGGLD+ CSIFNLNSP DKDGNL +S+MLSGHKGY
Sbjct: 99   KTHAIKLPCAWVMTCAFSPSGQSVACGGLDSVCSIFNLNSPTDKDGNLAMSKMLSGHKGY 158

Query: 362  VSSCQYVPNDDTHLITSSGDQTCALWDVTTGQRISIFGGEFSSGHTADVLSVSINRSDPN 541
            VSSCQYVP++DTHLITSSGDQTC LWD+TTG R S+FGGEF SGHTADVLSVSI+ S+  
Sbjct: 159  VSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSR 218

Query: 542  MFVSGSCDATVRLWDTRAASRAFRTHHGHERDVNTVKFFPDDQRFGTGSDDGTCRLFDMR 721
            MFVSGSCDAT RLWDTRAASRA RT HGHE DVNTV+FFPD  RFGTGSDDGTCRLFD+R
Sbjct: 219  MFVSGSCDATARLWDTRAASRAVRTFHGHEGDVNTVRFFPDGNRFGTGSDDGTCRLFDIR 278

Query: 722  TGNQLQVYTQQHGDDDVPTVTSITFSISGRLLFVGYSNGDCYVWDTLLAEVVLNLGSLQN 901
            TG+QLQVY Q+HGD++ P VTSI FSISGRLLF GYSNGDCYVWDTLLA+VVLNLGSLQN
Sbjct: 279  TGHQLQVYYQEHGDNEAPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAKVVLNLGSLQN 338

Query: 902  SHDERVSCLGMSADGSALCTGSWDRNLKIWAFGGHRKVI 1018
            SHD R+SCLG+SADGSALCTGSWD NLKIWAFGGHR+VI
Sbjct: 339  SHDSRISCLGLSADGSALCTGSWDTNLKIWAFGGHRRVI 377


>ref|XP_002313052.1| predicted protein [Populus trichocarpa] gi|222849460|gb|EEE87007.1|
            predicted protein [Populus trichocarpa]
          Length = 377

 Score =  607 bits (1565), Expect = e-171
 Identities = 284/339 (83%), Positives = 305/339 (89%)
 Frame = +2

Query: 2    HVRSQSRTPVSFGPTDLVCCRTLQGHSGKVYSLDWTSEKNRIVSASQDGRLIIWNALTSQ 181
            H R+Q R PVSFGPTDLVCCR LQGH+GKVYSLDWT EKNRIVSASQDGRLI+WNALTSQ
Sbjct: 39   HARAQGRNPVSFGPTDLVCCRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQ 98

Query: 182  KTHAIKLPCAWVMTCTFSPSSHFVACGGLDNTCSIFNLNSPVDKDGNLPLSRMLSGHKGY 361
            KTHAIKLPCAWVMTC FSP+   VACGGLD+ CSIFNLNSP DKDGNL +SRMLSGHKGY
Sbjct: 99   KTHAIKLPCAWVMTCAFSPAGQSVACGGLDSVCSIFNLNSPTDKDGNLTVSRMLSGHKGY 158

Query: 362  VSSCQYVPNDDTHLITSSGDQTCALWDVTTGQRISIFGGEFSSGHTADVLSVSINRSDPN 541
            VSSCQYVP++DTHLITSSGDQTC LWD+TTG R S+FGGEF SGHTADVLSVSI+ S+  
Sbjct: 159  VSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISGSNSR 218

Query: 542  MFVSGSCDATVRLWDTRAASRAFRTHHGHERDVNTVKFFPDDQRFGTGSDDGTCRLFDMR 721
            MFVSGSCD+T RLWDTR ASRA RT HGHE DVN VKFFPD  RFGTGSDDGTCRLFD+R
Sbjct: 219  MFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDVR 278

Query: 722  TGNQLQVYTQQHGDDDVPTVTSITFSISGRLLFVGYSNGDCYVWDTLLAEVVLNLGSLQN 901
            TG+QLQVY QQHGD+++  VTSI FSISGRLLF GYSNGDCYVWDTLLAEVVLNLGSLQN
Sbjct: 279  TGHQLQVYYQQHGDNEIAHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAEVVLNLGSLQN 338

Query: 902  SHDERVSCLGMSADGSALCTGSWDRNLKIWAFGGHRKVI 1018
            SH+ R+SCLG+SADGSALCTGSWD NLKIWAFGGHRKVI
Sbjct: 339  SHEGRISCLGLSADGSALCTGSWDTNLKIWAFGGHRKVI 377


>ref|XP_002306098.1| predicted protein [Populus trichocarpa] gi|222849062|gb|EEE86609.1|
            predicted protein [Populus trichocarpa]
          Length = 377

 Score =  607 bits (1565), Expect = e-171
 Identities = 282/339 (83%), Positives = 306/339 (90%)
 Frame = +2

Query: 2    HVRSQSRTPVSFGPTDLVCCRTLQGHSGKVYSLDWTSEKNRIVSASQDGRLIIWNALTSQ 181
            + R+Q R+PVSFGPTDLVCCRTLQGH+GKVYSLDWT E+NRIVSASQDGRLI+WNALTSQ
Sbjct: 39   YARAQERSPVSFGPTDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ 98

Query: 182  KTHAIKLPCAWVMTCTFSPSSHFVACGGLDNTCSIFNLNSPVDKDGNLPLSRMLSGHKGY 361
            KTHAIKLPCAWVMTC FSP+   VACGGLD+ CSIFNLNSP DKDGNLP+SRMLSGHKGY
Sbjct: 99   KTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDKDGNLPVSRMLSGHKGY 158

Query: 362  VSSCQYVPNDDTHLITSSGDQTCALWDVTTGQRISIFGGEFSSGHTADVLSVSINRSDPN 541
            VSSCQYVP++DTHLITSSGDQTC LWD+TTG R S+FGGEF SGHTADVLSVSIN S+  
Sbjct: 159  VSSCQYVPDEDTHLITSSGDQTCVLWDITTGIRTSVFGGEFQSGHTADVLSVSINGSNSR 218

Query: 542  MFVSGSCDATVRLWDTRAASRAFRTHHGHERDVNTVKFFPDDQRFGTGSDDGTCRLFDMR 721
            MFVSGSCD+T RLWDTR ASRA RT HGHE DVN VKFFPD  RFGTGSDDGTCRLFD+R
Sbjct: 219  MFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIR 278

Query: 722  TGNQLQVYTQQHGDDDVPTVTSITFSISGRLLFVGYSNGDCYVWDTLLAEVVLNLGSLQN 901
            TG+QLQVY  QHGD ++P VTSI FSISGRLLF GYSNGDCYVWDTLLAE VLNLGSLQN
Sbjct: 279  TGHQLQVYYHQHGDTEIPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAEAVLNLGSLQN 338

Query: 902  SHDERVSCLGMSADGSALCTGSWDRNLKIWAFGGHRKVI 1018
            SH+ R++CLG+SADGSALCTGSWD NLKIWAFGGHR+VI
Sbjct: 339  SHEGRITCLGLSADGSALCTGSWDTNLKIWAFGGHRQVI 377


>ref|XP_002509478.1| guanine nucleotide-binding protein beta, putative [Ricinus communis]
            gi|223549377|gb|EEF50865.1| guanine nucleotide-binding
            protein beta, putative [Ricinus communis]
          Length = 377

 Score =  602 bits (1553), Expect = e-170
 Identities = 280/339 (82%), Positives = 309/339 (91%)
 Frame = +2

Query: 2    HVRSQSRTPVSFGPTDLVCCRTLQGHSGKVYSLDWTSEKNRIVSASQDGRLIIWNALTSQ 181
            + R+Q +TPVSFGPTDLVCCRTLQGH+GKVYSLDWT+EKNRIVSASQDGRLI+WNALTSQ
Sbjct: 39   YARAQGKTPVSFGPTDLVCCRTLQGHTGKVYSLDWTAEKNRIVSASQDGRLIVWNALTSQ 98

Query: 182  KTHAIKLPCAWVMTCTFSPSSHFVACGGLDNTCSIFNLNSPVDKDGNLPLSRMLSGHKGY 361
            KTHAIKLPCAWVMTC FSP+   VACGGLD+ CSIFNLNSP +KDGNLP+S+MLSGHKGY
Sbjct: 99   KTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTEKDGNLPVSKMLSGHKGY 158

Query: 362  VSSCQYVPNDDTHLITSSGDQTCALWDVTTGQRISIFGGEFSSGHTADVLSVSINRSDPN 541
            VS+CQYVP++DTHLITSSGDQTC LWD+TTG R S+FGGEF SGHTADVLSVSIN S+  
Sbjct: 159  VSACQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSINGSNSR 218

Query: 542  MFVSGSCDATVRLWDTRAASRAFRTHHGHERDVNTVKFFPDDQRFGTGSDDGTCRLFDMR 721
            MFVSGSCD+T RLWDTR ASRA RT HGHE DV+ VKFFPD  RFGTGSDDGTCRLFD+R
Sbjct: 219  MFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVSAVKFFPDGNRFGTGSDDGTCRLFDIR 278

Query: 722  TGNQLQVYTQQHGDDDVPTVTSITFSISGRLLFVGYSNGDCYVWDTLLAEVVLNLGSLQN 901
            TG+QLQVY QQH D++VP VTSI FSISGRLLF GYSNGDCYVWDTLLA+VVL+LGSLQN
Sbjct: 279  TGHQLQVYYQQHNDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLDLGSLQN 338

Query: 902  SHDERVSCLGMSADGSALCTGSWDRNLKIWAFGGHRKVI 1018
            SH+ R+SCLG+SADGSALCTGS+D NLKIWAFGGHRKVI
Sbjct: 339  SHEGRISCLGLSADGSALCTGSYDTNLKIWAFGGHRKVI 377


>gb|ACR77529.1| heterotrimeric G protein beta 2 subunit [Nicotiana benthamiana]
          Length = 377

 Score =  602 bits (1551), Expect = e-170
 Identities = 279/339 (82%), Positives = 306/339 (90%)
 Frame = +2

Query: 2    HVRSQSRTPVSFGPTDLVCCRTLQGHSGKVYSLDWTSEKNRIVSASQDGRLIIWNALTSQ 181
            + RSQ +TPV+FGPTDLVCCR LQGH+GKVYSLDWT EKNRIVSASQDGRLI+WNALTSQ
Sbjct: 39   YARSQGKTPVTFGPTDLVCCRILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQ 98

Query: 182  KTHAIKLPCAWVMTCTFSPSSHFVACGGLDNTCSIFNLNSPVDKDGNLPLSRMLSGHKGY 361
            KTHAIKLPCAWVMTC FSPS   VACGGLD+ CSIFNLNSP+DKDGN P+SRMLSGHKGY
Sbjct: 99   KTHAIKLPCAWVMTCAFSPSGQSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGY 158

Query: 362  VSSCQYVPNDDTHLITSSGDQTCALWDVTTGQRISIFGGEFSSGHTADVLSVSINRSDPN 541
            VSSCQYVP++DTHLITSSGDQTC LWD+TTG R S+FGGEF SGHTADV SVSI+ S+P 
Sbjct: 159  VSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPR 218

Query: 542  MFVSGSCDATVRLWDTRAASRAFRTHHGHERDVNTVKFFPDDQRFGTGSDDGTCRLFDMR 721
            +FVSGSCD T RLWDTR ASRA RT +GHE DVNTVKFFPD  RFGTGS+DGTCRLFD+R
Sbjct: 219  LFVSGSCDTTARLWDTRVASRAQRTFYGHEGDVNTVKFFPDSNRFGTGSEDGTCRLFDIR 278

Query: 722  TGNQLQVYTQQHGDDDVPTVTSITFSISGRLLFVGYSNGDCYVWDTLLAEVVLNLGSLQN 901
            TG+QLQVY Q HGD D+P VTS+ FSISGRLLFVGYSNGDCYVWDTLLA+VVLNLG++QN
Sbjct: 279  TGHQLQVYYQPHGDGDIPHVTSMAFSISGRLLFVGYSNGDCYVWDTLLAKVVLNLGAVQN 338

Query: 902  SHDERVSCLGMSADGSALCTGSWDRNLKIWAFGGHRKVI 1018
            SH+ R+SCLG+SADGSALCTGSWD NLKIWAFGGHR VI
Sbjct: 339  SHEGRISCLGLSADGSALCTGSWDTNLKIWAFGGHRSVI 377


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