BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003668
         (908 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278056.1| PREDICTED: signal recognition particle recep...    71   3e-10
ref|XP_004172238.1| PREDICTED: LOW QUALITY PROTEIN: signal recog...    70   7e-10
ref|XP_004144723.1| PREDICTED: signal recognition particle recep...    70   7e-10
ref|XP_003527179.1| PREDICTED: signal recognition particle recep...    67   4e-09

>ref|XP_002278056.1| PREDICTED: signal recognition particle receptor subunit alpha
           [Vitis vinifera]
          Length = 616

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
 Frame = -2

Query: 424 KLENRISNGHESRVEYHV------NCESKLGLFDVNKFQKLRTKGGKKTDTVVNKAPKVE 263
           K+EN  +NG+    +  +      N  S +G FDVNK QKLR KGGKKTDTVVNK  KV+
Sbjct: 174 KMENGHANGNTDETKVALVANGKENASSNIGAFDVNKLQKLRAKGGKKTDTVVNKGSKVD 233

Query: 262 PKKK*QRKTEFGMINHQSIRP*T*LY*PCRRNIE----VVAANPGGSMMDEKKFI 110
           P KK  +K     ++    +       P  +N +    +VAA+ G SMMD+++ +
Sbjct: 234 PNKKITKKNRVWDVSPTESK--LDFTDPADQNGDENAVIVAADEGESMMDKEEIV 286


>ref|XP_004172238.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle
           receptor subunit alpha homolog, partial [Cucumis
           sativus]
          Length = 291

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
 Frame = -2

Query: 424 KLENRISNGH---ESRVEYHVN----CESKLGLFDVNKFQKLRTKGGKKTDTVVNKAPKV 266
           KLEN  SNG+   ES++   VN      S +G FDVNK QKLR+KGGKKTD V NK  K 
Sbjct: 174 KLENGYSNGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDPVANKGSKE 233

Query: 265 EPKKK*QRKTEFGMINHQSIRP*T*LY*PC----RRNIEVVAANPGGSMMDEKK 116
           EPKKK  +K    + + +          P       NI+V+AA+ G SMMD+++
Sbjct: 234 EPKKKVTKKNR--VWDEKPTEAKLDFTDPVGENGDNNIDVLAADQGQSMMDKEE 285


>ref|XP_004144723.1| PREDICTED: signal recognition particle receptor subunit alpha
           homolog [Cucumis sativus]
          Length = 617

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 50/114 (43%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
 Frame = -2

Query: 424 KLENRISNGH---ESRVEYHVN----CESKLGLFDVNKFQKLRTKGGKKTDTVVNKAPKV 266
           KLEN  SNG+   ES++   VN      S +G FDVNK QKLR+KGGKKTD V NK  K 
Sbjct: 174 KLENGYSNGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDPVANKGSKE 233

Query: 265 EPKKK*QRKTEFGMINHQSIRP*T*LY*PC----RRNIEVVAANPGGSMMDEKK 116
           EPKKK  +K    + + +          P       NI+V+AA+ G SMMD+++
Sbjct: 234 EPKKKVTKKNR--VWDEKPTEAKLDFTDPVGENGDNNIDVLAADQGQSMMDKEE 285


>ref|XP_003527179.1| PREDICTED: signal recognition particle receptor subunit alpha-like
           [Glycine max]
          Length = 623

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 51/126 (40%), Positives = 63/126 (50%), Gaps = 21/126 (16%)
 Frame = -2

Query: 424 KLENRISNGH---------ESRVEYHVNCESKLGLFDVNKFQKLRTKGGKKTDTVVNKAP 272
           KLEN  SNG+            V    N    +G FDV+K QKLRTKGGKKTDTVV KA 
Sbjct: 172 KLENGHSNGNFLVAKDTNLSRDVNGRHNGSPNVGAFDVHKLQKLRTKGGKKTDTVVAKAS 231

Query: 271 KVEPKKK*QRK-----------TEFGMINHQSIRP*T*LY*PCRRNIE-VVAANPGGSMM 128
           K EP KK  +K           T+    +H              RNI+ VVAA+ G SMM
Sbjct: 232 KAEPNKKVTKKNRVWDEAATTETKLDFTDHSGE--------DGERNIDFVVAADQGESMM 283

Query: 127 DEKKFI 110
           D+++ +
Sbjct: 284 DKEEIV 289