BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003654
         (1794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...   320   1e-84
ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]         310   8e-82
ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus...   308   3e-81
ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]         303   7e-80
ref|XP_003628656.1| Cyclin-D1-1 [Medicago truncatula] gi|3555226...   301   4e-79

>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|296086502|emb|CBI32091.3|
            unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  320 bits (819), Expect = 1e-84
 Identities = 170/308 (55%), Positives = 214/308 (69%), Gaps = 2/308 (0%)
 Frame = -3

Query: 1642 LLCCEEAEILRDDLPDYYSPNTEFPEDIEESIARLIEDEGEYMPRFDYQEMFQSQTIDAS 1463
            LLC E++ IL  DLP+  S + E P DIEESIA  IEDE  ++P FDY   F+S ++DAS
Sbjct: 12   LLCGEDSSILSGDLPEC-SSDLESPTDIEESIAGFIEDERNFVPGFDYLARFRSHSLDAS 70

Query: 1462 ARSDSIAWILKVQELYQFQPLTAYLSVNYMDRFLSSRCLPRLPKSNGWLMQLVSVASLSL 1283
            AR +S+AWILKVQ  + FQPLTAYLSVNY+DRFL SR   RLP++NGW +QL+SVA LSL
Sbjct: 71   AREESVAWILKVQAYHGFQPLTAYLSVNYLDRFLYSR---RLPQTNGWPLQLLSVACLSL 127

Query: 1282 AAKMEEPLVPSLFDIQVEGTQFIFEPKTIRRMEFIILNALDWRLRSITPFDFVSFFAKKV 1103
            AAKMEEPLVPSL D+QVEG +FIFE KTIRRME ++L  LDWRLRSITPF F+ FFA K+
Sbjct: 128  AAKMEEPLVPSLLDLQVEGAKFIFESKTIRRMELLVLGVLDWRLRSITPFSFIGFFAYKL 187

Query: 1102 ESTGTFTRFIASHATQVILIIMRDVNFLHYRPSSIXXXXXXXXANEYTSISLSNPGVAAT 923
            +S+G+   F+ S ATQ+IL  +++ +FL Y PS I        ANE   +SL +P  A +
Sbjct: 188  DSSGSVIGFLISRATQIILSNIQEASFLEYWPSCIAAAAILCAANEIPKLSLVDPERAES 247

Query: 922  WCIGLSKEKIVGCYKFIREVVVDSSPRTPPKEVPQR--WVXXXXXXXXXXXXXXXXXTKR 749
            WC GLSKEKI+ CY+ ++E+ VD++ R PPK +PQ    +                  KR
Sbjct: 248  WCDGLSKEKIISCYQLMQEITVDNNRRKPPKLLPQLRVTIRARVRSSGSSSSSSSSSYKR 307

Query: 748  RKLNNWLW 725
            RKLNN LW
Sbjct: 308  RKLNNCLW 315


>ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  310 bits (794), Expect = 8e-82
 Identities = 164/316 (51%), Positives = 211/316 (66%), Gaps = 10/316 (3%)
 Frame = -3

Query: 1642 LLCCEEAEILRDDLPDYYSPNTEFPEDIEESIARLIEDEGEYMPRFDYQEMFQSQTIDAS 1463
            LLC E++  + D  P+  S     P    ESIA  +EDE  ++P F+Y   FQS+++DAS
Sbjct: 17   LLCGEDSSGIMDSSPECSSDLDSSPPSEAESIAGFMEDERNFVPGFEYLNRFQSRSLDAS 76

Query: 1462 ARSDSIAWILKVQELYQFQPLTAYLSVNYMDRFLSSRCLPRLPKSNGWLMQLVSVASLSL 1283
            AR +S+AWILKVQ  Y FQP+TAYLSVNY+DRFL+SR LP  PK+NGW +QL+SVA LSL
Sbjct: 77   AREESVAWILKVQAYYAFQPVTAYLSVNYLDRFLNSRPLP--PKTNGWPLQLLSVACLSL 134

Query: 1282 AAKMEEPLVPSLFDIQVEGTQFIFEPKTIRRMEFIILNALDWRLRSITPFDFVSFFAKKV 1103
            AAKMEE LVPSL D+QVEG +++FEPKTIRRME ++L  LDWRLRS+TPF F+ FFA K+
Sbjct: 135  AAKMEESLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKL 194

Query: 1102 ESTGTFTRFIASHATQVILIIMRDVNFLHYRPSSIXXXXXXXXANEYTSISLSNPGVAAT 923
            +STGTFT F+ S ATQ+IL  +++ +FL Y PS I        ANE  + SL  P  A +
Sbjct: 195  DSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAAAILHAANEIPNWSLVRPEHAES 254

Query: 922  WCIGLSKEKIVGCYKFIREVVVDSSPRTPPKEVPQ----------RWVXXXXXXXXXXXX 773
            WC GL KEKI+GCY+ ++E+V+D++ R PPK +PQ          R              
Sbjct: 255  WCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQLRVTISRPIMRSSVSSFLASSSSPS 314

Query: 772  XXXXXTKRRKLNNWLW 725
                  +RRKLNN LW
Sbjct: 315  SSSLSCRRRKLNNSLW 330


>ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
            gi|449527605|ref|XP_004170800.1| PREDICTED:
            cyclin-D1-1-like [Cucumis sativus]
          Length = 335

 Score =  308 bits (789), Expect = 3e-81
 Identities = 164/311 (52%), Positives = 211/311 (67%), Gaps = 5/311 (1%)
 Frame = -3

Query: 1642 LLCCEEAE-ILRDDLPDYYSPNTEFPEDIEESIARLIEDEGEYMPRFDYQEMFQSQTIDA 1466
            LLC E++  IL  DL +Y S + E P   E+SIA  IEDE  ++P  DY   FQSQ++D+
Sbjct: 15   LLCDEDSSGILSGDLLEY-SSDLESPASSEDSIASFIEDERHFVPGIDYLSRFQSQSLDS 73

Query: 1465 SARSDSIAWILKVQELYQFQPLTAYLSVNYMDRFLSSRCLPRLPKSNGWLMQLVSVASLS 1286
            SAR+DS+AWILKVQ  Y FQPLTAYLSVNY+DRFL SR   RLP++NGW +QL+SVA LS
Sbjct: 74   SARADSVAWILKVQAYYGFQPLTAYLSVNYLDRFLYSR---RLPETNGWPLQLLSVACLS 130

Query: 1285 LAAKMEEPLVPSLFDIQVEGTQFIFEPKTIRRMEFIILNALDWRLRSITPFDFVSFFAKK 1106
            LAAKMEEP+VPS  D+Q+EG ++IFEP+TIRRME ++L  L+WRLRS+TPF F+ FFA K
Sbjct: 131  LAAKMEEPIVPSFVDLQIEGAKYIFEPRTIRRMELLVLTTLNWRLRSVTPFSFIGFFAYK 190

Query: 1105 VESTGTFTRFIASHATQVILIIMRDVNFLHYRPSSIXXXXXXXXANEYTSISLSNPGVAA 926
            V+ TGTF+ F+ S +T++IL   RD  FL Y PS I        ANE  +++L NP  A 
Sbjct: 191  VDPTGTFSSFLNSRSTEIILSNTRDATFLEYWPSCIAAAALLCAANEIPNLTLLNPEHAQ 250

Query: 925  TWCIGLSKEKIVGCYKFIREVVVDSSPRTPPKEVPQRWV----XXXXXXXXXXXXXXXXX 758
            +WC GLSK+KIVGCY+ ++ + ++S  R  PK +PQ  V                     
Sbjct: 251  SWCNGLSKDKIVGCYRLMQPLTLESRRRKAPKVIPQLRVRVRAGLRYSDSSSSSSSSRLP 310

Query: 757  TKRRKLNNWLW 725
             KRRKLNN +W
Sbjct: 311  FKRRKLNNCVW 321


>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  303 bits (777), Expect = 7e-80
 Identities = 163/317 (51%), Positives = 215/317 (67%), Gaps = 11/317 (3%)
 Frame = -3

Query: 1642 LLCCEEAEILRDDLPDYYSP-NTEFPEDIE-ESIARLIEDEGEYMPRFDYQEMFQSQTID 1469
            LLC E++  + D  P+  S  ++  P + E ESIA  IEDE  ++P F+Y   FQS+++D
Sbjct: 17   LLCGEDSSGIIDSSPECSSDLDSPPPSEAEAESIAGFIEDERNFVPGFEYLNRFQSRSLD 76

Query: 1468 ASARSDSIAWILKVQELYQFQPLTAYLSVNYMDRFLSSRCLPRLPKSNGWLMQLVSVASL 1289
            ASAR +S+AWILKVQ  Y FQPLTAYLSVNY+DRFL+SR   +LP++NGW +QL+SVA L
Sbjct: 77   ASAREESVAWILKVQAYYAFQPLTAYLSVNYLDRFLNSR---QLPQTNGWPLQLLSVACL 133

Query: 1288 SLAAKMEEPLVPSLFDIQVEGTQFIFEPKTIRRMEFIILNALDWRLRSITPFDFVSFFAK 1109
            SLAAKMEEPLVPSL D+QVEG +++FEPKTIRRME ++L  LDWRLRS+TPF F+ FFA 
Sbjct: 134  SLAAKMEEPLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLRSVTPFSFLDFFAC 193

Query: 1108 KVESTGTFTRFIASHATQVILIIMRDVNFLHYRPSSIXXXXXXXXANEYTSISLSNPGVA 929
            K++S+GTFT F+ S ATQ+IL  +++ +FL Y PS I        ANE  + S   P  A
Sbjct: 194  KLDSSGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAASILHAANEIPNWSFVRPEHA 253

Query: 928  ATWCIGLSKEKIVGCYKFIREVVVDSSPRTPPKEVPQ---------RWVXXXXXXXXXXX 776
             +WC GL KEK++GCY+ ++E+V++++ R PPK +PQ         R             
Sbjct: 254  ESWCEGLRKEKVIGCYQLMQELVINNNRRKPPKVLPQLRVTSRPIMRSSVSSFSASSSFS 313

Query: 775  XXXXXXTKRRKLNNWLW 725
                   KRRKLNN LW
Sbjct: 314  PSSSLSCKRRKLNNSLW 330


>ref|XP_003628656.1| Cyclin-D1-1 [Medicago truncatula] gi|355522678|gb|AET03132.1|
            Cyclin-D1-1 [Medicago truncatula]
          Length = 355

 Score =  301 bits (771), Expect = 4e-79
 Identities = 160/287 (55%), Positives = 204/287 (71%), Gaps = 12/287 (4%)
 Frame = -3

Query: 1642 LLCCEEA-EILRDDLPDYYSP-----------NTEFPEDIEESIARLIEDEGEYMPRFDY 1499
            LLC E++ E+L  DLP+  S            ++ F E+ EESIA  IE E +++P FDY
Sbjct: 21   LLCGEDSSEVLTGDLPECSSDLDSSSSSQLPSSSLFAEEEEESIAVFIEHEFKFVPGFDY 80

Query: 1498 QEMFQSQTIDASARSDSIAWILKVQELYQFQPLTAYLSVNYMDRFLSSRCLPRLPKSNGW 1319
               FQS+++++S R ++IAWILKV E Y FQPLTAYLSVNYMDRFL SR    LP+SNGW
Sbjct: 81   VSRFQSRSLESSTREEAIAWILKVHEYYGFQPLTAYLSVNYMDRFLDSR---PLPESNGW 137

Query: 1318 LMQLVSVASLSLAAKMEEPLVPSLFDIQVEGTQFIFEPKTIRRMEFIILNALDWRLRSIT 1139
             +QL+SVA LSLAAKMEEPLVPSL D Q+EG ++IF+P+TI RME ++L  LDWRLRSIT
Sbjct: 138  PLQLLSVACLSLAAKMEEPLVPSLLDFQIEGAKYIFQPRTILRMELLVLTILDWRLRSIT 197

Query: 1138 PFDFVSFFAKKVESTGTFTRFIASHATQVILIIMRDVNFLHYRPSSIXXXXXXXXANEYT 959
            P  F+SFFA K++STGTFT FI S AT++IL  ++D +FL YRPS I        ANE  
Sbjct: 198  PLSFLSFFACKLDSTGTFTHFIISRATEIILSNIQDASFLTYRPSCIAAAAILSAANEIP 257

Query: 958  SISLSNPGVAATWCIGLSKEKIVGCYKFIREVVVDSSPRTPPKEVPQ 818
            + S  NP  A +WC GLSKEKI+GCY+ I+E+V  ++ R  PK +PQ
Sbjct: 258  NWSFVNPEHAESWCEGLSKEKIIGCYELIQEIVSSNNQRNAPKVLPQ 304