BLASTX nr result

ID: Coptis23_contig00003653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003653
         (1263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284269.1| PREDICTED: dehydration-responsive protein RD...   186   6e-78
gb|AAV36561.1| RD22-like protein [Vitis vinifera]                     186   6e-78
ref|XP_003522684.1| PREDICTED: dehydration-responsive protein RD...   181   1e-75
ref|XP_002308621.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-75
ref|XP_002284286.1| PREDICTED: dehydration-responsive protein RD...   189   1e-75

>ref|XP_002284269.1| PREDICTED: dehydration-responsive protein RD22 [Vitis vinifera]
          Length = 364

 Score =  186 bits (471), Expect(2) = 6e-78
 Identities = 83/108 (76%), Positives = 96/108 (88%)
 Frame = -1

Query: 480 MSTEIDKQETPKQKYIIAPGVKKMGGENSVVCHKQTYAYAVFYCHKTKSTEAYKVPLVGA 301
           +STE++K ETP+Q+Y I  GVKK+ G+ +VVCHKQ+Y YAVFYCHKT++T AY VPLVGA
Sbjct: 255 ISTEVEK-ETPEQQYTITTGVKKLAGDKAVVCHKQSYPYAVFYCHKTQTTRAYMVPLVGA 313

Query: 300 DGTKATAVAVCHTDTSKWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 157
           DG+K  AVAVCHTDTS WNPKHLAFQVLKVKPGTVPICHFLPEDH+VW
Sbjct: 314 DGSKVKAVAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHVVW 361



 Score =  133 bits (334), Expect(2) = 6e-78
 Identities = 65/107 (60%), Positives = 78/107 (72%), Gaps = 6/107 (5%)
 Frame = -2

Query: 893 HKGKPVVVRAGD------FDYLYAASEDQLHSDPNVALFFLEKDLKSGTKMNLHFTRTTN 732
           HKGK V V  G       FDY YAA+EDQLH DPNVALFF EK+++ GTKM LHF R  N
Sbjct: 116 HKGKHVYVGVGKGKSKSPFDYKYAATEDQLHDDPNVALFFFEKNMQPGTKMELHFIRDAN 175

Query: 731 GARFLPRKVAEAIPLSSNKFPEVLKQFSVEPRSMEAEAMKQTVKECE 591
            A FLPR+VA +IP SS KFPE+L +FS++P S EAE +K T++ECE
Sbjct: 176 LATFLPRQVANSIPFSSKKFPEILNEFSIKPESEEAETIKNTIRECE 222


>gb|AAV36561.1| RD22-like protein [Vitis vinifera]
          Length = 364

 Score =  186 bits (471), Expect(2) = 6e-78
 Identities = 83/108 (76%), Positives = 96/108 (88%)
 Frame = -1

Query: 480 MSTEIDKQETPKQKYIIAPGVKKMGGENSVVCHKQTYAYAVFYCHKTKSTEAYKVPLVGA 301
           +STE++K ETP+Q+Y I  GVKK+ G+ +VVCHKQ+Y YAVFYCHKT++T AY VPLVGA
Sbjct: 255 ISTEVEK-ETPEQQYTITTGVKKLAGDKAVVCHKQSYPYAVFYCHKTQTTRAYMVPLVGA 313

Query: 300 DGTKATAVAVCHTDTSKWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 157
           DG+K  AVAVCHTDTS WNPKHLAFQVLKVKPGTVPICHFLPEDH+VW
Sbjct: 314 DGSKVKAVAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHVVW 361



 Score =  133 bits (334), Expect(2) = 6e-78
 Identities = 65/107 (60%), Positives = 78/107 (72%), Gaps = 6/107 (5%)
 Frame = -2

Query: 893 HKGKPVVVRAGD------FDYLYAASEDQLHSDPNVALFFLEKDLKSGTKMNLHFTRTTN 732
           HKGK V V  G       FDY YAA+EDQLH DPNVALFF EK+++ GTKM LHF R  N
Sbjct: 116 HKGKHVYVGVGKGKSKSPFDYKYAATEDQLHDDPNVALFFFEKNMQPGTKMELHFIRDAN 175

Query: 731 GARFLPRKVAEAIPLSSNKFPEVLKQFSVEPRSMEAEAMKQTVKECE 591
            A FLPR+VA +IP SS KFPE+L +FS++P S EAE +K T++ECE
Sbjct: 176 LATFLPRQVANSIPFSSKKFPEILNEFSIKPESEEAETIKNTIRECE 222


>ref|XP_003522684.1| PREDICTED: dehydration-responsive protein RD22-like [Glycine max]
          Length = 341

 Score =  181 bits (459), Expect(2) = 1e-75
 Identities = 79/108 (73%), Positives = 93/108 (86%)
 Frame = -1

Query: 480 MSTEIDKQETPKQKYIIAPGVKKMGGENSVVCHKQTYAYAVFYCHKTKSTEAYKVPLVGA 301
           +STE+DK ET  QKY +APGVKK+ G+ +VVCHKQ Y YAVFYCHKT++T AY VPL G 
Sbjct: 232 VSTEVDK-ETGLQKYTVAPGVKKLSGDKAVVCHKQNYPYAVFYCHKTETTRAYSVPLEGT 290

Query: 300 DGTKATAVAVCHTDTSKWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 157
           +G +  AVAVCHTDTS+WNPKHLAFQVLKVKPGT+P+CHFLPEDH+VW
Sbjct: 291 NGVRVKAVAVCHTDTSEWNPKHLAFQVLKVKPGTIPVCHFLPEDHVVW 338



 Score =  130 bits (326), Expect(2) = 1e-75
 Identities = 67/105 (63%), Positives = 80/105 (76%), Gaps = 4/105 (3%)
 Frame = -2

Query: 893 HKGKPVVVRAGD---FDYLYAASEDQLHSDPNVALFFLEKDLKSGTKMNLHFTR-TTNGA 726
           HKGKPV V  G    FDY+YAA+E QLH DPNVALFFLEKDL SGTK++LHFTR T+N A
Sbjct: 95  HKGKPVHVSVGSKSPFDYVYAATETQLHDDPNVALFFLEKDLHSGTKLDLHFTRSTSNQA 154

Query: 725 RFLPRKVAEAIPLSSNKFPEVLKQFSVEPRSMEAEAMKQTVKECE 591
            FL R+VA++IP SSNK   +  +FSV+P S EA+ MK T+ ECE
Sbjct: 155 TFLSRQVADSIPFSSNKVDFIFNKFSVKPGSEEAQIMKNTISECE 199


>ref|XP_002308621.1| predicted protein [Populus trichocarpa] gi|222854597|gb|EEE92144.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  179 bits (455), Expect(2) = 1e-75
 Identities = 82/111 (73%), Positives = 92/111 (82%)
 Frame = -1

Query: 480 MSTEIDKQETPKQKYIIAPGVKKMGGENSVVCHKQTYAYAVFYCHKTKSTEAYKVPLVGA 301
           +STE+D Q T  QKY I  GVKK+ G+ SVVCHKQ YAY+VFYCH T++T AY VPL G 
Sbjct: 292 ISTEVDNQ-TKMQKYTIKTGVKKVAGDKSVVCHKQNYAYSVFYCHATQTTRAYTVPLEGD 350

Query: 300 DGTKATAVAVCHTDTSKWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWTSN 148
           DGTKA AVAVCHTDTS WNPKHLAFQVL VKPGTVP+CHFLP+DH+VW SN
Sbjct: 351 DGTKAKAVAVCHTDTSAWNPKHLAFQVLNVKPGTVPVCHFLPQDHVVWFSN 401



 Score =  131 bits (329), Expect(2) = 1e-75
 Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 4/105 (3%)
 Frame = -2

Query: 893 HKGKPVVVRA----GDFDYLYAASEDQLHSDPNVALFFLEKDLKSGTKMNLHFTRTTNGA 726
           H GKPV+V      G F+Y+YAA+E QLH DPNVALFFLEKD+  G  MNL FT  TN A
Sbjct: 155 HHGKPVIVGVRPGPGPFNYIYAATETQLHDDPNVALFFLEKDMHPGKIMNLQFTENTNTA 214

Query: 725 RFLPRKVAEAIPLSSNKFPEVLKQFSVEPRSMEAEAMKQTVKECE 591
            FLPR+VA++IP SS+K PE+  +FSV+P SMEA  M+ T+KECE
Sbjct: 215 TFLPRQVADSIPFSSDKLPEIYSEFSVKPGSMEAAEMENTIKECE 259


>ref|XP_002284286.1| PREDICTED: dehydration-responsive protein RD22 [Vitis vinifera]
           gi|227464475|gb|ACP40551.1| rd22-c [Vitis vinifera]
          Length = 337

 Score =  189 bits (481), Expect(2) = 1e-75
 Identities = 87/108 (80%), Positives = 96/108 (88%)
 Frame = -1

Query: 480 MSTEIDKQETPKQKYIIAPGVKKMGGENSVVCHKQTYAYAVFYCHKTKSTEAYKVPLVGA 301
           +STE+ K ET KQKY IA GVKKM G+ SVVCHKQ Y YAVFYCHKT++T AY VPLVGA
Sbjct: 228 ISTEVVK-ETQKQKYTIAAGVKKMAGDESVVCHKQNYPYAVFYCHKTQTTRAYMVPLVGA 286

Query: 300 DGTKATAVAVCHTDTSKWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 157
           DGT+A AVAVCHTDTS+WNPKHLAFQVLKVKPGT+PICHFLPEDHI+W
Sbjct: 287 DGTRAKAVAVCHTDTSEWNPKHLAFQVLKVKPGTIPICHFLPEDHIIW 334



 Score =  121 bits (303), Expect(2) = 1e-75
 Identities = 61/105 (58%), Positives = 75/105 (71%), Gaps = 4/105 (3%)
 Frame = -2

Query: 893 HKGKPVVVRA----GDFDYLYAASEDQLHSDPNVALFFLEKDLKSGTKMNLHFTRTTNGA 726
           HKGKPV V        F Y YAA+EDQLH+DP+VALFF+EKD++ GTKMNLHF + T  A
Sbjct: 92  HKGKPVYVGVTPGPSPFTYKYAATEDQLHADPSVALFFMEKDMRPGTKMNLHFIKNTKEA 151

Query: 725 RFLPRKVAEAIPLSSNKFPEVLKQFSVEPRSMEAEAMKQTVKECE 591
            FLP+     I  SS K PE+LK FSV+P S+EA+ +K T+KECE
Sbjct: 152 TFLPQS-EHPIIFSSEKLPEILKHFSVKPESVEAQIIKNTIKECE 195


Top