BLASTX nr result

ID: Coptis23_contig00003643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003643
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|2...   145   6e-33
ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus co...   141   2e-31
ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|2...   134   3e-29
ref|XP_002306321.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_003531554.1| PREDICTED: dnaJ-like protein R260-like [Glyc...   101   1e-19

>ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|222852893|gb|EEE90440.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  145 bits (367), Expect = 6e-33
 Identities = 77/151 (50%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
 Frame = -1

Query: 588 SKQVPMFSTRRSMHRASRPNLISCRASTLETK-RVGTNFYEVLSLDSENVSFEEVKKAYR 412
           + ++P+   + S  ++ +   I C+ +T E   R   NFYEVLSL S+NV F+E+KKAYR
Sbjct: 12  ANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQNVGFDEIKKAYR 71

Query: 411 SMARQYHPDVVPASGKEESTKKFVELQRAYETLSNPNSRQKYDYELGLNYLSGFGMTGIR 232
           SMA QYHPDV P S KEESTK+FVELQ+AYETLS+P +R+ YD ELG+    GF   G+ 
Sbjct: 72  SMALQYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLELGMVNSVGFAFEGLP 131

Query: 231 SE---ANFHRDVWEDQLQGLESRSHFKMGRK 148
           SE   ++F R+VWE QL GL  RS+ ++ R+
Sbjct: 132 SEDRKSSFPREVWERQLHGLYQRSYARVERR 162


>ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus communis]
           gi|223531559|gb|EEF33388.1| chaperone protein DNAj,
           putative [Ricinus communis]
          Length = 165

 Score =  141 bits (355), Expect = 2e-31
 Identities = 79/154 (51%), Positives = 103/154 (66%), Gaps = 5/154 (3%)
 Frame = -1

Query: 585 KQVPMFSTRRSMHRA--SRPNLISCRASTLETKRVGTNFYEVLSLDSENVSFEEVKKAYR 412
           K VP     RS  +   ++   I+C    ++ K+  TNFYEVLSL S+NV F+E++KAYR
Sbjct: 13  KVVPFLRKIRSRQKGFHNKARTITCSYRIMQEKK--TNFYEVLSLQSKNVGFDEIRKAYR 70

Query: 411 SMARQYHPDVVPASGKEESTKKFVELQRAYETLSNPNSRQKYDYELGLNYLSGFGMTGIR 232
           SMA Q+HPDV   S KEESTK+FVELQ+AYETLS+P SR+ YDYEL L    G G+  IR
Sbjct: 71  SMALQFHPDVCRLSAKEESTKRFVELQKAYETLSDPVSRRLYDYELNLVASIGLGLE-IR 129

Query: 231 SEA---NFHRDVWEDQLQGLESRSHFKMGRKQRR 139
            E    +F ++VWE QL GL  RSH ++ RK ++
Sbjct: 130 MEERKNSFPKEVWEMQLYGLSQRSHIRLQRKNKK 163


>ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|222837896|gb|EEE76261.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  134 bits (336), Expect = 3e-29
 Identities = 73/147 (49%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
 Frame = -1

Query: 588 SKQVPMFSTRRSMHRASRPNLISCRASTLETK-RVGTNFYEVLSLDSENVSFEEVKKAYR 412
           + ++P+   + S  ++ +   I C+ +T E   R   NFYEVLSL S+NV F+E+KKAYR
Sbjct: 12  ANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQNVGFDEIKKAYR 71

Query: 411 SMARQYHPDVVPASGKEESTKKFVELQRAYETLSNPNSRQKYDYELGLNYLSGFGMTGIR 232
           SMA QYHPDV P S KEESTK+FVELQ+AYETLS+P +R+ YD ELGL            
Sbjct: 72  SMALQYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLELGL--------PSED 123

Query: 231 SEANFHRDVWEDQLQGLESRSHFKMGR 151
            + +F R+VWE QL GL  RS+ ++ R
Sbjct: 124 RKNSFPREVWERQLHGLYQRSYARVER 150


>ref|XP_002306321.1| predicted protein [Populus trichocarpa] gi|222855770|gb|EEE93317.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  118 bits (295), Expect = 1e-24
 Identities = 60/112 (53%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
 Frame = -1

Query: 465 LSLDSENVSFEEVKKAYRSMARQYHPDVVPASGKEESTKKFVELQRAYETLSNPNSRQKY 286
           L ++     F+E+KKAYRSMA QYHPDV   S +EESTK+FVELQ+AYETLS+P SR+ +
Sbjct: 5   LQVNLNTARFDEIKKAYRSMALQYHPDVCTPSAREESTKRFVELQKAYETLSDPVSRRMH 64

Query: 285 DYELGLNYLSGFGMTGIRSE---ANFHRDVWEDQLQGLESRSHFKMGRKQRR 139
           DYELGL    GF   G+  E     F R+VWE QL GL+ RS+ +M R+  +
Sbjct: 65  DYELGLVNSGGFAFEGLPLEDRKNRFPREVWERQLHGLQQRSYARMERRNNK 116


>ref|XP_003531554.1| PREDICTED: dnaJ-like protein R260-like [Glycine max]
          Length = 171

 Score =  101 bits (252), Expect = 1e-19
 Identities = 64/161 (39%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
 Frame = -1

Query: 612 MMISCQLN-SKQVPMFSTRRSMHRASRPNL---ISCRASTLETKRVGTNFYEVLSLDSEN 445
           + +S  +N SK     +  +   R   P     +SCR        V  N Y+VLSL  ++
Sbjct: 4   LTLSSSVNISKPFHFLTLSKKQQRERHPRTQFGVSCRGRKELGGGVEDNLYKVLSLSPKS 63

Query: 444 VSFEEVKKAYRSMARQYHPDVV-PASGKEESTKKFVELQRAYETLSNPNSRQKYDYELGL 268
            + +++KKAYRSMA +YHPDV    S KEEST+ FV+L  AY+TLSNP  R +YD ELGL
Sbjct: 64  ATTDDIKKAYRSMALRYHPDVCQDCSKKEESTRMFVQLNAAYQTLSNPRLRAEYDCELGL 123

Query: 267 NYLSGFGMTGIRSEANFHRDVWEDQLQGLESRSHFKMGRKQ 145
                    G+  E    R +W++QL  L+ RSH +M + Q
Sbjct: 124 R----SEKIGVGDET--WRYIWQNQLAELKRRSHIRMAQNQ 158


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