BLASTX nr result

ID: Coptis23_contig00003638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003638
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528397.1| conserved hypothetical protein [Ricinus comm...   244   3e-62
ref|XP_002299157.1| predicted protein [Populus trichocarpa] gi|2...   244   6e-62
gb|ABR16502.1| unknown [Picea sitchensis]                             243   8e-62
ref|XP_004166179.1| PREDICTED: uncharacterized LOC101216574 [Cuc...   238   4e-60
ref|XP_004144718.1| PREDICTED: uncharacterized protein LOC101216...   238   4e-60

>ref|XP_002528397.1| conserved hypothetical protein [Ricinus communis]
           gi|223532185|gb|EEF33990.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 560

 Score =  244 bits (624), Expect = 3e-62
 Identities = 129/245 (52%), Positives = 164/245 (66%), Gaps = 20/245 (8%)
 Frame = +1

Query: 76  KKTPSFLDLVESKLSHS------------NTSFSMLSRPKSDSAVVSVPQSNGKAKASNF 219
           +K+PS LDL++ +LS              NT+ + + + +S +   +   S  K KASNF
Sbjct: 81  RKSPSLLDLIQMRLSQGGASAPGTIQGTDNTNNNSVIKKESSNKTTTASSSTDKLKASNF 140

Query: 220 SASLLRIGSWELLSRYDGQLVAKCYFAKRKLVWEVLDDGLKRKIEVQWSDISALKATYVN 399
            AS+LRIGSWE  SRY+G+LVAKCYFAK KLVWEVL+ GLK KIE+QWSDI ALKA   +
Sbjct: 141 PASILRIGSWEYKSRYEGELVAKCYFAKHKLVWEVLEGGLKSKIEIQWSDIMALKANCPD 200

Query: 400 NAPDTLEIELLRRPLFSRETNPQPRKHTLWKATSDFTDGQASIVRRHFLQFPQGTLQKHY 579
           N P TL + L R+PLF RETNPQPRKHTLW+AT+DFT+GQASI R+HFLQ PQG L KH+
Sbjct: 201 NEPGTLTVVLARQPLFFRETNPQPRKHTLWQATADFTNGQASIHRQHFLQCPQGLLNKHF 260

Query: 580 EKLLQLDNGLFLLSKNPYPSLDSAYF--------DPDDLERQNSDNYLSGLMGQSSIRFE 735
           EKL+Q D  L  LS+ P   LDS YF        DPDD + Q+ +    G+   S+  F+
Sbjct: 261 EKLIQCDMRLNFLSRQPEIILDSPYFEQRTSVFEDPDDPKSQDFNKVEMGIASSSASGFQ 320

Query: 736 ELLES 750
           +L+ S
Sbjct: 321 DLVAS 325


>ref|XP_002299157.1| predicted protein [Populus trichocarpa] gi|222846415|gb|EEE83962.1|
           predicted protein [Populus trichocarpa]
          Length = 510

 Score =  244 bits (622), Expect = 6e-62
 Identities = 124/194 (63%), Positives = 147/194 (75%)
 Frame = +1

Query: 76  KKTPSFLDLVESKLSHSNTSFSMLSRPKSDSAVVSVPQSNGKAKASNFSASLLRIGSWEL 255
           KK+PSFLDL++ KLS  NTS +MLS+  S +A         K KASNF+ASLL+IGSWE 
Sbjct: 63  KKSPSFLDLIQMKLSQQNTSNTMLSKKPSSAAA-------DKLKASNFTASLLKIGSWEC 115

Query: 256 LSRYDGQLVAKCYFAKRKLVWEVLDDGLKRKIEVQWSDISALKATYVNNAPDTLEIELLR 435
            SRY+G LVAKCYFAK KLVWEVLD GLK KIE+QWSDI A+KA + ++ P+TL++ L R
Sbjct: 116 KSRYEGDLVAKCYFAKHKLVWEVLDGGLKNKIEIQWSDIVAIKANFPDDGPETLDVVLAR 175

Query: 436 RPLFSRETNPQPRKHTLWKATSDFTDGQASIVRRHFLQFPQGTLQKHYEKLLQLDNGLFL 615
           +PLF RETNPQPRKHTLW+ATSDFT GQAS  RRHFLQF QG + KHYEKL+Q D  L  
Sbjct: 176 QPLFFRETNPQPRKHTLWQATSDFTGGQASTHRRHFLQFQQGFMGKHYEKLIQCDPRLSF 235

Query: 616 LSKNPYPSLDSAYF 657
           LS+     L+S YF
Sbjct: 236 LSQQLEIILESPYF 249


>gb|ABR16502.1| unknown [Picea sitchensis]
          Length = 592

 Score =  243 bits (621), Expect = 8e-62
 Identities = 131/239 (54%), Positives = 157/239 (65%), Gaps = 1/239 (0%)
 Frame = +1

Query: 76  KKTPSFLDLVESKLSHSNTSFSMLSRPKSDSAVVSVPQSNG-KAKASNFSASLLRIGSWE 252
           +K+PS LDL++ KLS  + +FS     K      S  Q++  K KASNF  S+LRIG+WE
Sbjct: 88  RKSPSLLDLIQMKLSQGDPAFSGQEEGKRRDVRSSAAQNSADKLKASNFPVSILRIGTWE 147

Query: 253 LLSRYDGQLVAKCYFAKRKLVWEVLDDGLKRKIEVQWSDISALKATYVNNAPDTLEIELL 432
            +SRY+G LVAKCYFAK KLVWEVLD GLK KIE+QWSDISALKA+Y+ + P TL+IE+ 
Sbjct: 148 CISRYEGDLVAKCYFAKHKLVWEVLDGGLKSKIEIQWSDISALKASYLEDEPGTLDIEVS 207

Query: 433 RRPLFSRETNPQPRKHTLWKATSDFTDGQASIVRRHFLQFPQGTLQKHYEKLLQLDNGLF 612
           R PLF RETNPQPRKHTLW+ATSDFT GQA+I RRHFLQ P G L +HYEKL+Q D  L 
Sbjct: 208 RPPLFFRETNPQPRKHTLWQATSDFTGGQATICRRHFLQCPHGLLNRHYEKLIQCDPRLN 267

Query: 613 LLSKNPYPSLDSAYFDPDDLERQNSDNYLSGLMGQSSIRFEELLESGPSDEYLELLRCF 789
           LLSK  + S  S  FD      Q+ D        Q +        S   +EYL    CF
Sbjct: 268 LLSKKAFLSEASPNFDSKSAVFQDRDEQFCYGKAQENESHVLTQFSHLKEEYLASFSCF 326


>ref|XP_004166179.1| PREDICTED: uncharacterized LOC101216574 [Cucumis sativus]
          Length = 540

 Score =  238 bits (606), Expect = 4e-60
 Identities = 120/202 (59%), Positives = 145/202 (71%), Gaps = 7/202 (3%)
 Frame = +1

Query: 76  KKTPSFLDLVESKLSHSNTSFSML-------SRPKSDSAVVSVPQSNGKAKASNFSASLL 234
           +K+PS LDL++ KLS S  + S +       S  K ++    +P S  K KASNF ASLL
Sbjct: 82  RKSPSLLDLIQMKLSQSTAASSDVAECESFNSSLKKENKGTVIPSSTDKLKASNFPASLL 141

Query: 235 RIGSWELLSRYDGQLVAKCYFAKRKLVWEVLDDGLKRKIEVQWSDISALKATYVNNAPDT 414
           RIG WE  SRY+G LVAKCYFAK KLVWE+L+ GLK KIE+QWSDI ALKA   +N P T
Sbjct: 142 RIGGWEYKSRYEGDLVAKCYFAKHKLVWEILEGGLKSKIEIQWSDIMALKANCPDNGPGT 201

Query: 415 LEIELLRRPLFSRETNPQPRKHTLWKATSDFTDGQASIVRRHFLQFPQGTLQKHYEKLLQ 594
           L + L R+PLF RETNPQPRKHTLW+AT+DFTDGQA++ R+HFLQ PQG L KH+EKL+Q
Sbjct: 202 LNVVLARQPLFFRETNPQPRKHTLWQATADFTDGQATVHRQHFLQCPQGLLNKHFEKLIQ 261

Query: 595 LDNGLFLLSKNPYPSLDSAYFD 660
            D  L  LS+ P   LDS YF+
Sbjct: 262 CDMRLNFLSRQPEIVLDSPYFE 283


>ref|XP_004144718.1| PREDICTED: uncharacterized protein LOC101216574 [Cucumis sativus]
          Length = 532

 Score =  238 bits (606), Expect = 4e-60
 Identities = 120/202 (59%), Positives = 145/202 (71%), Gaps = 7/202 (3%)
 Frame = +1

Query: 76  KKTPSFLDLVESKLSHSNTSFSML-------SRPKSDSAVVSVPQSNGKAKASNFSASLL 234
           +K+PS LDL++ KLS S  + S +       S  K ++    +P S  K KASNF ASLL
Sbjct: 82  RKSPSLLDLIQMKLSQSTAASSDVAECESFNSSLKKENKGTVIPSSTDKLKASNFPASLL 141

Query: 235 RIGSWELLSRYDGQLVAKCYFAKRKLVWEVLDDGLKRKIEVQWSDISALKATYVNNAPDT 414
           RIG WE  SRY+G LVAKCYFAK KLVWE+L+ GLK KIE+QWSDI ALKA   +N P T
Sbjct: 142 RIGGWEYKSRYEGDLVAKCYFAKHKLVWEILEGGLKSKIEIQWSDIMALKANCPDNGPGT 201

Query: 415 LEIELLRRPLFSRETNPQPRKHTLWKATSDFTDGQASIVRRHFLQFPQGTLQKHYEKLLQ 594
           L + L R+PLF RETNPQPRKHTLW+AT+DFTDGQA++ R+HFLQ PQG L KH+EKL+Q
Sbjct: 202 LNVVLARQPLFFRETNPQPRKHTLWQATADFTDGQATVHRQHFLQCPQGLLNKHFEKLIQ 261

Query: 595 LDNGLFLLSKNPYPSLDSAYFD 660
            D  L  LS+ P   LDS YF+
Sbjct: 262 CDMRLNFLSRQPEIVLDSPYFE 283


Top