BLASTX nr result
ID: Coptis23_contig00003627
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003627
(1203 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64677.1| hypothetical protein VITISV_024917 [Vitis vinifera] 519 e-145
ref|XP_002528905.1| tRNA-dihydrouridine synthase, putative [Rici... 517 e-144
ref|XP_004143428.1| PREDICTED: tRNA-dihydrouridine(20) synthase ... 498 e-138
ref|XP_003516878.1| PREDICTED: tRNA-dihydrouridine synthase 2-li... 498 e-138
ref|XP_004160928.1| PREDICTED: tRNA-dihydrouridine(20) synthase ... 496 e-138
>emb|CAN64677.1| hypothetical protein VITISV_024917 [Vitis vinifera]
Length = 326
Score = 519 bits (1336), Expect = e-145
Identities = 249/317 (78%), Positives = 291/317 (91%)
Frame = +3
Query: 189 MDYNNKLVLAPMVRVGTLPLRLLAAEYGADITYGEEIIDHKFVKCERIVNESLGSIDFVE 368
M+Y N+LVLAPMVRVGTLP RLLAA+YGADITYGEEIIDHK +KCER +NE +GSIDFVE
Sbjct: 1 MEYGNRLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLIKCERRLNEDIGSIDFVE 60
Query: 369 KGTGTVVFRTCNEERNRVVFQIGTSDAVRALNAAQIVCKDVAAIDINMGCPKPFSTTGGM 548
KGT VVFRTC+EE+NRVVFQ+GTS+A RAL AAQIVCKDVAA+DINMGCPK FS +GGM
Sbjct: 61 KGTHNVVFRTCHEEKNRVVFQMGTSNAERALTAAQIVCKDVAAVDINMGCPKSFSISGGM 120
Query: 549 GAAILSKPELIHDILTTLKRNLDLPVTCKIRLLKSSKDTVELVRRIEKTGVSALAVHGRR 728
GAA+L++PELIHDILT LKRNLD+PVTCKIRLLKSS++TVEL ++IEKTGV+ALAVHGRR
Sbjct: 121 GAALLTRPELIHDILTILKRNLDIPVTCKIRLLKSSQETVELAQQIEKTGVAALAVHGRR 180
Query: 729 IADRPKDPARWSEIADIVAALSIPVVANGDVFEYEDIQRIKKTTGASSVMVARGALWNAS 908
IADRP+DPA+W+EIAD+VAALSIPV+ANGDVF Y+D QRIK TGASSVMVARGALWNAS
Sbjct: 181 IADRPRDPAKWNEIADVVAALSIPVIANGDVFGYDDFQRIKVATGASSVMVARGALWNAS 240
Query: 909 IFSPTEKLPWEDLKIEYVRKSILWDNDVRSTKHTLREMIGHYMSLELSEGKALVKTETLA 1088
+FSP K+PWED+K EY+RKSILWDND++STKHTL+EMI H+ LEL EGKA++K+ETLA
Sbjct: 241 VFSPEGKVPWEDVKXEYIRKSILWDNDIKSTKHTLKEMIMHHSCLELPEGKAVIKSETLA 300
Query: 1089 DVAELYGEMKYYRAVKG 1139
D+A+LYGE KYY+ V+G
Sbjct: 301 DLAKLYGEEKYYQFVRG 317
>ref|XP_002528905.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
gi|223531659|gb|EEF33485.1| tRNA-dihydrouridine synthase,
putative [Ricinus communis]
Length = 330
Score = 517 bits (1332), Expect = e-144
Identities = 254/315 (80%), Positives = 283/315 (89%)
Frame = +3
Query: 189 MDYNNKLVLAPMVRVGTLPLRLLAAEYGADITYGEEIIDHKFVKCERIVNESLGSIDFVE 368
M+Y NKLVLAPMVRVGTLP RLLAAEYGADITYGEEIIDHK +KCER VNE +G DFVE
Sbjct: 1 MEYENKLVLAPMVRVGTLPFRLLAAEYGADITYGEEIIDHKLLKCERKVNEYIGCTDFVE 60
Query: 369 KGTGTVVFRTCNEERNRVVFQIGTSDAVRALNAAQIVCKDVAAIDINMGCPKPFSTTGGM 548
KGT VVFRTCNEE+NRVVFQ+GTSDAVRAL AAQ+VCKDVAAIDINMGCPK FS +GGM
Sbjct: 61 KGTENVVFRTCNEEKNRVVFQMGTSDAVRALTAAQMVCKDVAAIDINMGCPKSFSISGGM 120
Query: 549 GAAILSKPELIHDILTTLKRNLDLPVTCKIRLLKSSKDTVELVRRIEKTGVSALAVHGRR 728
GAA+L+KPELIHDILTTLKRNLD PVTCKIRLLKS +DTVEL RRIEKTGVSALAVHGR+
Sbjct: 121 GAALLTKPELIHDILTTLKRNLDSPVTCKIRLLKSPQDTVELARRIEKTGVSALAVHGRK 180
Query: 729 IADRPKDPARWSEIADIVAALSIPVVANGDVFEYEDIQRIKKTTGASSVMVARGALWNAS 908
+ADRP+DPA+WSEIADIV+ LSIPV+ANGDVF+Y D +RIK TGASSVMVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADIVSTLSIPVIANGDVFDYGDFERIKAATGASSVMVARGALWNAS 240
Query: 909 IFSPTEKLPWEDLKIEYVRKSILWDNDVRSTKHTLREMIGHYMSLELSEGKALVKTETLA 1088
IFSP K+ WED+K EYVRKSILWDNDV+STKHTL+EMI HY LEL EGK ++K+ETLA
Sbjct: 241 IFSPKGKVHWEDVKREYVRKSILWDNDVKSTKHTLKEMIMHYSCLELPEGKGVIKSETLA 300
Query: 1089 DVAELYGEMKYYRAV 1133
D+A+ YGE +YY+ V
Sbjct: 301 DIAKFYGEERYYQLV 315
>ref|XP_004143428.1| PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Cucumis
sativus]
Length = 325
Score = 498 bits (1282), Expect = e-138
Identities = 240/316 (75%), Positives = 283/316 (89%)
Frame = +3
Query: 189 MDYNNKLVLAPMVRVGTLPLRLLAAEYGADITYGEEIIDHKFVKCERIVNESLGSIDFVE 368
MDY NK VLAPMVRVGTLP RLLA++YGADITYGEEIIDHK +KCER +NE +GS DFVE
Sbjct: 1 MDYENKFVLAPMVRVGTLPFRLLASQYGADITYGEEIIDHKMIKCERRLNEHVGSTDFVE 60
Query: 369 KGTGTVVFRTCNEERNRVVFQIGTSDAVRALNAAQIVCKDVAAIDINMGCPKPFSTTGGM 548
KGT VVFRTC+ ER VVFQ+GTS+A RAL+AAQ+VC+DVAAIDINMGCPK FS +GGM
Sbjct: 61 KGTNNVVFRTCSLERKHVVFQMGTSNAARALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120
Query: 549 GAAILSKPELIHDILTTLKRNLDLPVTCKIRLLKSSKDTVELVRRIEKTGVSALAVHGRR 728
GAA+L+KP+LIHDILTTL+RNL++ +TCKIRLL S +DTVEL RRIE TGVSAL VHGRR
Sbjct: 121 GAALLNKPDLIHDILTTLRRNLNILITCKIRLLNSPQDTVELARRIESTGVSALGVHGRR 180
Query: 729 IADRPKDPARWSEIADIVAALSIPVVANGDVFEYEDIQRIKKTTGASSVMVARGALWNAS 908
+ADRP+DPA+WSEIAD+VAAL+IPV+ANGD+FEY+D QRIK TGASS+MVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALTIPVIANGDIFEYDDFQRIKVHTGASSMMVARGALWNAS 240
Query: 909 IFSPTEKLPWEDLKIEYVRKSILWDNDVRSTKHTLREMIGHYMSLELSEGKALVKTETLA 1088
IFSP KLPWED+K EYVRKSILWDND++STK+TL+EMI H+ LEL EGKA++K+E+LA
Sbjct: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKYTLKEMIMHHSCLELPEGKAVIKSESLA 300
Query: 1089 DVAELYGEMKYYRAVK 1136
D+A+LYGE KYY+ V+
Sbjct: 301 DLAKLYGEEKYYQFVQ 316
>ref|XP_003516878.1| PREDICTED: tRNA-dihydrouridine synthase 2-like isoform 1 [Glycine
max]
Length = 320
Score = 498 bits (1282), Expect = e-138
Identities = 240/316 (75%), Positives = 282/316 (89%)
Frame = +3
Query: 189 MDYNNKLVLAPMVRVGTLPLRLLAAEYGADITYGEEIIDHKFVKCERIVNESLGSIDFVE 368
M+Y NKLVLAPMVRVGTLP RLLAA+YGADITYGEEIIDHK +KC+R +NE +GS DFVE
Sbjct: 1 MEYRNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMLKCDRQINELIGSTDFVE 60
Query: 369 KGTGTVVFRTCNEERNRVVFQIGTSDAVRALNAAQIVCKDVAAIDINMGCPKPFSTTGGM 548
KGT VVFRTC+EE++ VVFQIGTSDAVRAL AQ+VC DVAA+DINMGCPK FS +GGM
Sbjct: 61 KGTKNVVFRTCDEEKDTVVFQIGTSDAVRALATAQLVCNDVAAVDINMGCPKSFSVSGGM 120
Query: 549 GAAILSKPELIHDILTTLKRNLDLPVTCKIRLLKSSKDTVELVRRIEKTGVSALAVHGRR 728
GAA+LSKPELIHDILTTL+RNL+ PVTCKIRLLKS DTVEL RRIEKTGVSALAVHGR+
Sbjct: 121 GAALLSKPELIHDILTTLRRNLNTPVTCKIRLLKSPHDTVELARRIEKTGVSALAVHGRK 180
Query: 729 IADRPKDPARWSEIADIVAALSIPVVANGDVFEYEDIQRIKKTTGASSVMVARGALWNAS 908
+ DRP+DPA+W+EIAD+V+ALSIPV+ANGDVFEY+D +RIK TGASSVMVARGALWNAS
Sbjct: 181 VPDRPRDPAKWNEIADVVSALSIPVIANGDVFEYDDFERIKSATGASSVMVARGALWNAS 240
Query: 909 IFSPTEKLPWEDLKIEYVRKSILWDNDVRSTKHTLREMIGHYMSLELSEGKALVKTETLA 1088
+FSP K+ +E +K EY+RK ILWDND++STKHTL+EMI HY LEL EGKA++K+E++A
Sbjct: 241 MFSPEGKVSYEAVKREYIRKCILWDNDLKSTKHTLKEMIMHYSCLELPEGKAVIKSESMA 300
Query: 1089 DVAELYGEMKYYRAVK 1136
D+AELYG+ +YY+ VK
Sbjct: 301 DLAELYGQREYYQLVK 316
>ref|XP_004160928.1| PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like [Cucumis
sativus]
Length = 325
Score = 496 bits (1277), Expect = e-138
Identities = 239/316 (75%), Positives = 283/316 (89%)
Frame = +3
Query: 189 MDYNNKLVLAPMVRVGTLPLRLLAAEYGADITYGEEIIDHKFVKCERIVNESLGSIDFVE 368
MDY NK VLAPMVRVGTLP RLLA+++GADITYGEEIIDHK +KCER +NE +GS DFVE
Sbjct: 1 MDYENKFVLAPMVRVGTLPFRLLASQHGADITYGEEIIDHKMIKCERRLNEHVGSTDFVE 60
Query: 369 KGTGTVVFRTCNEERNRVVFQIGTSDAVRALNAAQIVCKDVAAIDINMGCPKPFSTTGGM 548
KGT VVFRTC+ ER VVFQ+GTS+A RAL+AAQ+VC+DVAAIDINMGCPK FS +GGM
Sbjct: 61 KGTNNVVFRTCSLERKHVVFQMGTSNAARALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120
Query: 549 GAAILSKPELIHDILTTLKRNLDLPVTCKIRLLKSSKDTVELVRRIEKTGVSALAVHGRR 728
GAA+L+KP+LIHDILTTL+RNL++ +TCKIRLL S +DTVEL RRIE TGVSAL VHGRR
Sbjct: 121 GAALLNKPDLIHDILTTLRRNLNILITCKIRLLNSPQDTVELARRIESTGVSALGVHGRR 180
Query: 729 IADRPKDPARWSEIADIVAALSIPVVANGDVFEYEDIQRIKKTTGASSVMVARGALWNAS 908
+ADRP+DPA+WSEIAD+VAAL+IPV+ANGD+FEY+D QRIK TGASS+MVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALTIPVIANGDIFEYDDFQRIKVHTGASSMMVARGALWNAS 240
Query: 909 IFSPTEKLPWEDLKIEYVRKSILWDNDVRSTKHTLREMIGHYMSLELSEGKALVKTETLA 1088
IFSP KLPWED+K EYVRKSILWDND++STK+TL+EMI H+ LEL EGKA++K+E+LA
Sbjct: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKYTLKEMIMHHSCLELPEGKAVIKSESLA 300
Query: 1089 DVAELYGEMKYYRAVK 1136
D+A+LYGE KYY+ V+
Sbjct: 301 DLAKLYGEEKYYQFVQ 316