BLASTX nr result

ID: Coptis23_contig00003623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003623
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621788.1| Metal tolerance protein [Medicago truncatula...   192   4e-47
gb|ACJ84262.1| unknown [Medicago truncatula]                          192   4e-47
ref|XP_003552671.1| PREDICTED: metal tolerance protein 5-like [G...   189   5e-46
ref|NP_001242648.1| uncharacterized protein LOC100791229 [Glycin...   189   5e-46
ref|XP_002533664.1| cation efflux protein/ zinc transporter, put...   187   1e-45

>ref|XP_003621788.1| Metal tolerance protein [Medicago truncatula]
           gi|355496803|gb|AES78006.1| Metal tolerance protein
           [Medicago truncatula]
          Length = 400

 Score =  192 bits (489), Expect = 4e-47
 Identities = 99/135 (73%), Positives = 110/135 (81%), Gaps = 4/135 (2%)
 Frame = -2

Query: 393 SGNEERPWRLNFDSIQRCSEYTDKPPKR----HYCLRVLASEDGVAVYYQQQVEMLEGFN 226
           S N +R WRLNFDS Q  S++T+K PK     H C  VL  ED +A YYQQQVE+LEGF 
Sbjct: 23  SDNGDRSWRLNFDSFQLNSQHTEKTPKPSSGIHDCYGVLGQEDNIAEYYQQQVEVLEGFT 82

Query: 225 EMDALAECGFLPGMSKEERDKMARSERMAIRLSNIANMILFAAKVYASIRSGSLAIIAST 46
           EMDALAE GF+PGMSKEERDK+ARSE  AIR+SNIANM+LF AKVYAS+RSGSLAIIAST
Sbjct: 83  EMDALAERGFIPGMSKEERDKLARSETFAIRISNIANMVLFTAKVYASVRSGSLAIIAST 142

Query: 45  LDSLLDLFSGFILWF 1
           LDSLLDL SGFILWF
Sbjct: 143 LDSLLDLLSGFILWF 157


>gb|ACJ84262.1| unknown [Medicago truncatula]
          Length = 400

 Score =  192 bits (489), Expect = 4e-47
 Identities = 99/135 (73%), Positives = 110/135 (81%), Gaps = 4/135 (2%)
 Frame = -2

Query: 393 SGNEERPWRLNFDSIQRCSEYTDKPPKR----HYCLRVLASEDGVAVYYQQQVEMLEGFN 226
           S N +R WRLNFDS Q  S++T+K PK     H C  VL  ED +A YYQQQVE+LEGF 
Sbjct: 23  SDNGDRSWRLNFDSFQLNSQHTEKTPKPSSGIHDCYGVLGQEDNIAEYYQQQVEVLEGFT 82

Query: 225 EMDALAECGFLPGMSKEERDKMARSERMAIRLSNIANMILFAAKVYASIRSGSLAIIAST 46
           EMDALAE GF+PGMSKEERDK+ARSE  AIR+SNIANM+LF AKVYAS+RSGSLAIIAST
Sbjct: 83  EMDALAERGFIPGMSKEERDKLARSETFAIRISNIANMVLFTAKVYASVRSGSLAIIAST 142

Query: 45  LDSLLDLFSGFILWF 1
           LDSLLDL SGFILWF
Sbjct: 143 LDSLLDLLSGFILWF 157


>ref|XP_003552671.1| PREDICTED: metal tolerance protein 5-like [Glycine max]
          Length = 396

 Score =  189 bits (479), Expect = 5e-46
 Identities = 99/138 (71%), Positives = 110/138 (79%), Gaps = 4/138 (2%)
 Frame = -2

Query: 402 LLESGNEERPWRLNFDSIQRCSEYTDK---PPKR-HYCLRVLASEDGVAVYYQQQVEMLE 235
           L +S N +R WRLNFD  Q  SE+ +K   PP+  H C  VL  ED +A YYQQQVE+LE
Sbjct: 16  LSDSSNGDRSWRLNFDGFQLSSEHAEKQVKPPRGLHDCYGVLGQEDNIAEYYQQQVEVLE 75

Query: 234 GFNEMDALAECGFLPGMSKEERDKMARSERMAIRLSNIANMILFAAKVYASIRSGSLAII 55
           GF EMDALAE GF+PGMSKEERDK+ARSE  AIR+SN ANM+LF AKVYASIRSGSLAII
Sbjct: 76  GFTEMDALAERGFIPGMSKEERDKLARSETFAIRVSNAANMVLFVAKVYASIRSGSLAII 135

Query: 54  ASTLDSLLDLFSGFILWF 1
           ASTLDSLLDL SGFILWF
Sbjct: 136 ASTLDSLLDLLSGFILWF 153


>ref|NP_001242648.1| uncharacterized protein LOC100791229 [Glycine max]
           gi|255644613|gb|ACU22809.1| unknown [Glycine max]
          Length = 396

 Score =  189 bits (479), Expect = 5e-46
 Identities = 98/138 (71%), Positives = 111/138 (80%), Gaps = 4/138 (2%)
 Frame = -2

Query: 402 LLESGNEERPWRLNFDSIQRCSEYTDK---PPKR-HYCLRVLASEDGVAVYYQQQVEMLE 235
           L +S N +R WRLNFD  Q  SE+T+K   PP+  H C  VL  ED +A YYQQQVE+LE
Sbjct: 16  LSDSSNGDRSWRLNFDGFQLSSEHTEKQVKPPRGLHDCYGVLGQEDNIAEYYQQQVEVLE 75

Query: 234 GFNEMDALAECGFLPGMSKEERDKMARSERMAIRLSNIANMILFAAKVYASIRSGSLAII 55
           GF EMDALAE GF+PGMSKEE+DK+ARSE  AIR+SN ANM+LF AKVYAS+RSGSLAII
Sbjct: 76  GFTEMDALAERGFIPGMSKEEQDKLARSETFAIRVSNAANMVLFVAKVYASVRSGSLAII 135

Query: 54  ASTLDSLLDLFSGFILWF 1
           ASTLDSLLDL SGFILWF
Sbjct: 136 ASTLDSLLDLLSGFILWF 153


>ref|XP_002533664.1| cation efflux protein/ zinc transporter, putative [Ricinus
           communis] gi|223526446|gb|EEF28723.1| cation efflux
           protein/ zinc transporter, putative [Ricinus communis]
          Length = 394

 Score =  187 bits (475), Expect = 1e-45
 Identities = 96/133 (72%), Positives = 109/133 (81%), Gaps = 2/133 (1%)
 Frame = -2

Query: 393 SGNEERPWRLNFDSIQRCSEYTDK--PPKRHYCLRVLASEDGVAVYYQQQVEMLEGFNEM 220
           + N ++ WRLNFD  Q  +E+ +K  P   H CL VL  ED VA YYQQQVEMLEGFNEM
Sbjct: 19  NNNGDQSWRLNFDGYQLSTEHKEKKQPSSLHDCLGVLRPEDDVAEYYQQQVEMLEGFNEM 78

Query: 219 DALAECGFLPGMSKEERDKMARSERMAIRLSNIANMILFAAKVYASIRSGSLAIIASTLD 40
           DALAE GF+PGMSKEE++ +ARSE  AIR+SNIANM+LFAAKVYAS+RSGSLAIIASTLD
Sbjct: 79  DALAERGFIPGMSKEEQENLARSETFAIRISNIANMVLFAAKVYASVRSGSLAIIASTLD 138

Query: 39  SLLDLFSGFILWF 1
           SLLDL SGFILWF
Sbjct: 139 SLLDLLSGFILWF 151


Top