BLASTX nr result

ID: Coptis23_contig00003621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003621
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299648.1| predicted protein [Populus trichocarpa] gi|1...   192   1e-96
ref|XP_002314241.1| predicted protein [Populus trichocarpa] gi|1...   192   3e-96
emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana ta...   190   5e-96
ref|NP_001241123.1| uncharacterized protein LOC100820387 [Glycin...   191   1e-95
ref|XP_004144647.1| PREDICTED: proteasome subunit alpha type-3-l...   191   2e-95

>ref|XP_002299648.1| predicted protein [Populus trichocarpa] gi|118488197|gb|ABK95918.1|
           unknown [Populus trichocarpa]
           gi|222846906|gb|EEE84453.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  192 bits (487), Expect(2) = 1e-96
 Identities = 86/92 (93%), Positives = 92/92 (100%)
 Frame = +2

Query: 440 YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYRYFG 619
           YGEP+P+KELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM+EPSG+SYRYFG
Sbjct: 103 YGEPVPIKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGISYRYFG 162

Query: 620 AAIGKGRQAAKTEIEKLKLSEMTCREGVVEVA 715
           AAIGKG+QAAKTEIEKLKLSEMTCREGV+EVA
Sbjct: 163 AAIGKGKQAAKTEIEKLKLSEMTCREGVIEVA 194



 Score =  187 bits (476), Expect(2) = 1e-96
 Identities = 93/97 (95%), Positives = 96/97 (98%)
 Frame = +3

Query: 69  IGTGYDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGS 248
           IGTGYDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGS
Sbjct: 4   IGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGS 63

Query: 249 NRRIHSVHRHSGMAVAGLAADGRQIVARTKSEATNYE 359
           NRRIH+VHRHSGMAVAGLAADGRQIVAR KSEATNY+
Sbjct: 64  NRRIHAVHRHSGMAVAGLAADGRQIVARAKSEATNYQ 100


>ref|XP_002314241.1| predicted protein [Populus trichocarpa] gi|118488569|gb|ABK96097.1|
           unknown [Populus trichocarpa]
           gi|222850649|gb|EEE88196.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  192 bits (487), Expect(2) = 3e-96
 Identities = 88/92 (95%), Positives = 92/92 (100%)
 Frame = +2

Query: 440 YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYRYFG 619
           YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM+EPSG+SYRYFG
Sbjct: 103 YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGISYRYFG 162

Query: 620 AAIGKGRQAAKTEIEKLKLSEMTCREGVVEVA 715
           AAIGKG+QAAKTEIEKLKLSEMTCREGV+EVA
Sbjct: 163 AAIGKGKQAAKTEIEKLKLSEMTCREGVLEVA 194



 Score =  186 bits (472), Expect(2) = 3e-96
 Identities = 92/97 (94%), Positives = 96/97 (98%)
 Frame = +3

Query: 69  IGTGYDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGS 248
           IGTGYDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGS
Sbjct: 4   IGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGS 63

Query: 249 NRRIHSVHRHSGMAVAGLAADGRQIVARTKSEATNYE 359
           NRRIH+VHRHSGMAVAGLAADGRQIVAR KSEA+NY+
Sbjct: 64  NRRIHTVHRHSGMAVAGLAADGRQIVARAKSEASNYQ 100


>emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana tabacum]
          Length = 249

 Score =  190 bits (482), Expect(2) = 5e-96
 Identities = 94/97 (96%), Positives = 96/97 (98%)
 Frame = +3

Query: 69  IGTGYDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGS 248
           IGTGYDLSVTTFSPDGRVFQIEYA KAVDNSGTV+GIKCKDGIV+GVEKLIASKMMLPGS
Sbjct: 4   IGTGYDLSVTTFSPDGRVFQIEYAGKAVDNSGTVVGIKCKDGIVLGVEKLIASKMMLPGS 63

Query: 249 NRRIHSVHRHSGMAVAGLAADGRQIVARTKSEATNYE 359
           NRRIHSVHRHSGMAVAGLAADGRQIVARTKSEATNYE
Sbjct: 64  NRRIHSVHRHSGMAVAGLAADGRQIVARTKSEATNYE 100



 Score =  187 bits (476), Expect(2) = 5e-96
 Identities = 87/92 (94%), Positives = 91/92 (98%)
 Frame = +2

Query: 440 YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYRYFG 619
           YGEPI VKELA+RVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM+EPSGVSYRYFG
Sbjct: 103 YGEPILVKELAERVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGVSYRYFG 162

Query: 620 AAIGKGRQAAKTEIEKLKLSEMTCREGVVEVA 715
           AAIGKGRQAAKTEIEKLKLSEMTCR+GV+EVA
Sbjct: 163 AAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVA 194


>ref|NP_001241123.1| uncharacterized protein LOC100820387 [Glycine max]
           gi|255641143|gb|ACU20849.1| unknown [Glycine max]
          Length = 249

 Score =  191 bits (484), Expect(2) = 1e-95
 Identities = 87/92 (94%), Positives = 92/92 (100%)
 Frame = +2

Query: 440 YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYRYFG 619
           YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM+EPSGVSYRYFG
Sbjct: 103 YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGVSYRYFG 162

Query: 620 AAIGKGRQAAKTEIEKLKLSEMTCREGVVEVA 715
           AAIGKGRQAAKTEIEKLKL++MTCR+GV+EVA
Sbjct: 163 AAIGKGRQAAKTEIEKLKLADMTCRQGVIEVA 194



 Score =  185 bits (470), Expect(2) = 1e-95
 Identities = 91/97 (93%), Positives = 95/97 (97%)
 Frame = +3

Query: 69  IGTGYDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGS 248
           IGTGYDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDG+V+GVEKLI SKMMLPGS
Sbjct: 4   IGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGVVLGVEKLIPSKMMLPGS 63

Query: 249 NRRIHSVHRHSGMAVAGLAADGRQIVARTKSEATNYE 359
           NRRIHSVHRHSGMAVAGLAADGRQIVAR KSEATNY+
Sbjct: 64  NRRIHSVHRHSGMAVAGLAADGRQIVARAKSEATNYD 100


>ref|XP_004144647.1| PREDICTED: proteasome subunit alpha type-3-like [Cucumis sativus]
          Length = 249

 Score =  191 bits (484), Expect(2) = 2e-95
 Identities = 87/92 (94%), Positives = 92/92 (100%)
 Frame = +2

Query: 440 YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYRYFG 619
           YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM+EPSGVSYRY+G
Sbjct: 103 YGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGVSYRYYG 162

Query: 620 AAIGKGRQAAKTEIEKLKLSEMTCREGVVEVA 715
           AAIGKGRQAAKTEIEKLKLSE+TCR+GV+EVA
Sbjct: 163 AAIGKGRQAAKTEIEKLKLSELTCRQGVIEVA 194



 Score =  185 bits (469), Expect(2) = 2e-95
 Identities = 90/97 (92%), Positives = 95/97 (97%)
 Frame = +3

Query: 69  IGTGYDLSVTTFSPDGRVFQIEYASKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGS 248
           IGTGYDLSVTTFSPDGRVFQIEYA+KAVDNSGTVIGIKCKDG+VMGVEKLI SKMMLPGS
Sbjct: 4   IGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGVVMGVEKLITSKMMLPGS 63

Query: 249 NRRIHSVHRHSGMAVAGLAADGRQIVARTKSEATNYE 359
           NRRIH++HRHSGMAVAGLAADGRQIVAR KSEA+NYE
Sbjct: 64  NRRIHAIHRHSGMAVAGLAADGRQIVARAKSEASNYE 100


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