BLASTX nr result

ID: Coptis23_contig00003610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003610
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279364.1| PREDICTED: uncharacterized protein LOC100247...   169   1e-39
emb|CAN73618.1| hypothetical protein VITISV_004114 [Vitis vinifera]   167   4e-39
ref|XP_002266955.1| PREDICTED: uncharacterized protein LOC100252...   154   5e-35
ref|XP_002321314.1| predicted protein [Populus trichocarpa] gi|2...   151   2e-34
emb|CBI39526.3| unnamed protein product [Vitis vinifera]              149   9e-34

>ref|XP_002279364.1| PREDICTED: uncharacterized protein LOC100247751 [Vitis vinifera]
          Length = 350

 Score =  169 bits (427), Expect = 1e-39
 Identities = 121/357 (33%), Positives = 160/357 (44%), Gaps = 31/357 (8%)
 Frame = +3

Query: 105  MASTPTPSKPTEEGLEPLKYQTWVLKVSIHCEGCKRKVKKVLTSVEGVYNVAIDSQQHKV 284
            MA+     +  EE LEPLKY+TWVLKVSIHCEGCK+KVKK+L +++GVY   ID++Q KV
Sbjct: 1    MATQGEAKEVVEEALEPLKYKTWVLKVSIHCEGCKKKVKKILQNIDGVYTTEIDTRQQKV 60

Query: 285  TVTGNVDGDALVKKLVKTGKHAELWPEKAETKKDKKQSNKGTTNDSKSSEESRVEDHQKK 464
             VTGNVD + L+KKLVK GKHAELWPEKA+ +K+KK  NK    D +S+E+    D  K+
Sbjct: 61   CVTGNVDVETLLKKLVKNGKHAELWPEKADHQKEKKSKNKEKQKDQESNEQEGGHDGDKE 120

Query: 465  ----------------ETEHVEVNNNXXXXXXXXXXXXXXXXXXISVKDNGNSQTEESKP 596
                            E +H E                       +   NG +  +E+KP
Sbjct: 121  KSTVKFEAVQEPTKNPEPKHSEAAAASGSGGGGGGGGGAKVGENGAAVKNGAAAQKEAKP 180

Query: 597  DGKLTENVSTNVGQSQTSVPXXXXXXXXXXXXXXXXXXXXXQKRNVPEGGEGTNDTVESN 776
            + K  E  ++  G++  +                       +K+     G+  N  V + 
Sbjct: 181  EVKKPE--ASPAGEAPPAAEKKVGESDACADKGGSGNGSKKKKKK----GQKPNSDVGAP 234

Query: 777  VSFTPNGPATPTFNLSPPRQHG-----------YQYRTYGPP-PVYAVXXXXXXXXXXXX 920
             S TP  P     N SP   HG           Y    Y PP P Y V            
Sbjct: 235  SSDTPAAPPGSP-NPSPAPSHGPAPASTQTVYHYPPHYYAPPQPAYTVSYNTMHPSTSHE 293

Query: 921  XXXXXXXXXXXXX--MDPQSYGQPVDS-FEMHHQSYPPQSDSFQIFSDENANGCFIM 1082
                           M P  + +P  S F+ +  S  P SDSFQ FSDEN N C +M
Sbjct: 294  ASYYATPPPQYSYAYMHPGPWTEPPPSDFDSNPSSVHPPSDSFQFFSDENPNACSLM 350


>emb|CAN73618.1| hypothetical protein VITISV_004114 [Vitis vinifera]
          Length = 350

 Score =  167 bits (423), Expect = 4e-39
 Identities = 121/357 (33%), Positives = 160/357 (44%), Gaps = 31/357 (8%)
 Frame = +3

Query: 105  MASTPTPSKPTEEGLEPLKYQTWVLKVSIHCEGCKRKVKKVLTSVEGVYNVAIDSQQHKV 284
            MA+     +  EE LEPLKY+TWVLKVSIHCEGCK+KVKK+L +++GVY   ID++Q KV
Sbjct: 1    MATQGEAKEVVEEALEPLKYKTWVLKVSIHCEGCKKKVKKILQNIDGVYTTEIDTRQQKV 60

Query: 285  TVTGNVDGDALVKKLVKTGKHAELWPEKAETKKDKKQSNKGTTNDSKSSE---------- 434
             VTGNVD + L+KKLVK GKHAELWPEKA+ +K+KK  NK    D +S+E          
Sbjct: 61   CVTGNVDVETLLKKLVKNGKHAELWPEKADHQKEKKSKNKEKQKDQESNEQEGGHGGDKE 120

Query: 435  ------ESRVEDHQKKETEHVEVNNNXXXXXXXXXXXXXXXXXXISVKDNGNSQTEESKP 596
                  E+  E  +  E +H E                       +   NG +  +E+KP
Sbjct: 121  KSTVKFEAVQEPTKNPEPKHSEAAAASGSGGGGGGGGGTKVGENGAAVKNGAAAQKEAKP 180

Query: 597  DGKLTENVSTNVGQSQTSVPXXXXXXXXXXXXXXXXXXXXXQKRNVPEGGEGTNDTVESN 776
            + K  E  ++  G++  +                       +K+     G+  N  V + 
Sbjct: 181  EVKKPE--ASPAGEAPPAAEKKVGESDACADKGGSGNGSKKKKKK----GQKPNSDVGAP 234

Query: 777  VSFTPNGPATPTFNLSPPRQHG-----------YQYRTYGPP-PVYAVXXXXXXXXXXXX 920
             S TP  P     N SP   HG           Y    Y PP P Y V            
Sbjct: 235  SSDTPAAPPGSP-NPSPAPSHGPAPASTQTVYHYPPHYYAPPQPAYTVSYNTMHPSTSHG 293

Query: 921  XXXXXXXXXXXXX--MDPQSYGQPVDS-FEMHHQSYPPQSDSFQIFSDENANGCFIM 1082
                           M P  + +P  S F+ +  S  P SDSFQ FSDEN N C +M
Sbjct: 294  ASYYATPPPQYSYAYMHPGPWTEPPPSDFDSNPSSVHPPSDSFQFFSDENPNACSLM 350


>ref|XP_002266955.1| PREDICTED: uncharacterized protein LOC100252094 [Vitis vinifera]
           gi|297743851|emb|CBI36821.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  154 bits (388), Expect = 5e-35
 Identities = 73/121 (60%), Positives = 89/121 (73%), Gaps = 2/121 (1%)
 Frame = +3

Query: 126 SKPTEEGLEPLKYQTWVLKVSIHCEGCKRKVKKVLTSVEGVYNVAIDSQQHKVTVTGNVD 305
           + P ++  +PLKYQTWVLKVSIHCEGCK+KVKKVL S++GVY   IDSQQHKVTVTGNVD
Sbjct: 3   TSPAQDPPQPLKYQTWVLKVSIHCEGCKKKVKKVLHSIDGVYTTVIDSQQHKVTVTGNVD 62

Query: 306 GDALVKKLVKTGKHAELWPEKAETKKDK--KQSNKGTTNDSKSSEESRVEDHQKKETEHV 479
            + L+KKLVKTGKHA+LWPEK + K++   K  NK   ND+K S +   E  QK   +  
Sbjct: 63  AETLIKKLVKTGKHADLWPEKPDNKENSPGKSKNKKKQNDAKDSNKGNGEGDQKNSADKP 122

Query: 480 E 482
           E
Sbjct: 123 E 123


>ref|XP_002321314.1| predicted protein [Populus trichocarpa] gi|222862087|gb|EEE99629.1|
            predicted protein [Populus trichocarpa]
          Length = 292

 Score =  151 bits (382), Expect = 2e-34
 Identities = 113/345 (32%), Positives = 149/345 (43%), Gaps = 26/345 (7%)
 Frame = +3

Query: 126  SKPTEEGLEPLKYQTWVLKVSIHCEGCKRKVKKVLTSVEGVYNVAIDSQQHKVTVTGNVD 305
            +KP EE LE LKYQTWVLKVSIHCEGCK+KVKKVL S++GVY   +DS QHKVTVTGNVD
Sbjct: 3    TKPAEEALEQLKYQTWVLKVSIHCEGCKKKVKKVLQSIDGVYKTEVDSHQHKVTVTGNVD 62

Query: 306  GDALVKKLVKTGKHAELWPEKAETKKDKKQSNKGTTNDSKSS-----EESRVEDHQKK-- 464
               L+KKL+++GK+AELWP+ +E K  +K S K   ND + S     E    +DHQK   
Sbjct: 63   AQILIKKLMRSGKYAELWPKNSENK--EKTSGKSQNNDKQKSPKDVQEVGGGDDHQKNTP 120

Query: 465  ----ETEHV-------EVNNNXXXXXXXXXXXXXXXXXXISVKDNGNSQTEESKPDGKLT 611
                ETE         +  N+                   S   +G  + ++ KP G   
Sbjct: 121  AEKPETEAKIGGGNGGDDQNSGAESDDGGLESASPVAAAASGGGSGKKKKKKKKPSGNSN 180

Query: 612  ENVSTNVGQSQTSVPXXXXXXXXXXXXXXXXXXXXXQKRNVPEGGEGTNDTVESNVSFTP 791
               S   G +   VP                                  DT  S+++   
Sbjct: 181  NGAS---GDNSGGVPA---------------------------------DTGSSSMADLD 204

Query: 792  NGPATPTFNLSPPRQHGYQY--RTYGPPPVYAVXXXXXXXXXXXXXXXXXXXXXXXXXMD 965
            + P+    + SPP QH Y Y    + P PVY +                           
Sbjct: 205  SAPSMSLMSHSPPHQHVYPYPPMYHQPIPVYGI-----------------NYNTAYCSAS 247

Query: 966  PQSYGQPVDS-FEMHHQSY----PPQSDSFQIFS-DENANGCFIM 1082
               Y  P+ +    HHQ       P SD  + F+ D+N  GC +M
Sbjct: 248  ESCYAHPMHAQIHYHHQQRYQPPAPPSDLIKEFNDDDNETGCSVM 292


>emb|CBI39526.3| unnamed protein product [Vitis vinifera]
          Length = 129

 Score =  149 bits (377), Expect = 9e-34
 Identities = 70/122 (57%), Positives = 91/122 (74%)
 Frame = +3

Query: 105 MASTPTPSKPTEEGLEPLKYQTWVLKVSIHCEGCKRKVKKVLTSVEGVYNVAIDSQQHKV 284
           MA+     +  EE LEPLKY+TWVLKVSIHCEGCK+KVKK+L +++GVY   ID++Q KV
Sbjct: 1   MATQGEAKEVVEEALEPLKYKTWVLKVSIHCEGCKKKVKKILQNIDGVYTTEIDTRQQKV 60

Query: 285 TVTGNVDGDALVKKLVKTGKHAELWPEKAETKKDKKQSNKGTTNDSKSSEESRVEDHQKK 464
            VTGNVD + L+KKLVK GKHAELWPEKA+ +K+KK  NK    D +S+E+    D  K+
Sbjct: 61  CVTGNVDVETLLKKLVKNGKHAELWPEKADHQKEKKSKNKEKQKDQESNEQEGGHDGDKE 120

Query: 465 ET 470
           ++
Sbjct: 121 KS 122


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