BLASTX nr result

ID: Coptis23_contig00003609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003609
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG68657.1| jasmonate ZIM-domain protein 3 [Nicotiana tabacum]     72   4e-11
gb|ADG57917.1| transcription factor [Lycoris longituba]                69   6e-10
ref|XP_003542368.1| PREDICTED: protein TIFY 10A-like [Glycine max]     67   1e-09
gb|ACU19759.1| unknown [Glycine max]                                   67   1e-09
gb|ACN26522.1| unknown [Zea mays] gi|414867160|tpg|DAA45717.1| T...    67   1e-09

>dbj|BAG68657.1| jasmonate ZIM-domain protein 3 [Nicotiana tabacum]
          Length = 207

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
 Frame = +1

Query: 106 SPEFIETGRYAGRKTVKVYEKSNFSQTCNLLSQYLKEKXXXXXXXXXXXXPCDLGKSPAM 285
           S E +++GR+A        +KSNFSQTCNLLSQYLKEK                  +  M
Sbjct: 3   SSEIVDSGRFAAAAAGG--QKSNFSQTCNLLSQYLKEKKGSFGDLSLGIHRAG---TTTM 57

Query: 286 DLFPQHTGFAEETMKTTEFSAPM------PKPNQMTIIYGGKVLVFDDVAEGKVKELMMF 447
           DL P    F E   + +    P       P+  QMTI YGG+V+VF+D    K KE+M+ 
Sbjct: 58  DLLPMIEKFGESNPQKSMNLFPQTEAKSEPEKAQMTIFYGGQVIVFNDFPADKAKEIMLM 117

Query: 448 A 450
           A
Sbjct: 118 A 118


>gb|ADG57917.1| transcription factor [Lycoris longituba]
          Length = 143

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 45/123 (36%), Positives = 53/123 (43%), Gaps = 26/123 (21%)
 Frame = +1

Query: 172 NFSQTCNLLSQYLKEKXXXXXXXXXXXXP--------------------------CDLGK 273
           NF+ TCNLLSQY+KEK                                        D   
Sbjct: 4   NFTVTCNLLSQYIKEKGRSLGDLALIGKNDTYRAPTTMSLLPGADVSGDGTKENVSDRNT 63

Query: 274 SPAMDLFPQHTGFAEETMKTTEFSAPMPKPNQMTIIYGGKVLVFDDVAEGKVKELMMFAG 453
           + +MDLFPQ  GF  +T    E   P   P  +TI YGGKVLVFD+    K K+LMM  G
Sbjct: 64  TKSMDLFPQRAGFGLQTPPAAEKREPEKSP--LTIFYGGKVLVFDNFPTDKAKDLMMLVG 121

Query: 454 KGS 462
            GS
Sbjct: 122 NGS 124


>ref|XP_003542368.1| PREDICTED: protein TIFY 10A-like [Glycine max]
          Length = 242

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 32/150 (21%)
 Frame = +1

Query: 163 EKSNFSQTCNLLSQYLKEKXXXXXXXXXXXXPCDLGKSP--------AMDLFPQHTGFAE 318
           EKS FSQTC+LLSQY+KEK              +   SP         M+LFP  T   +
Sbjct: 21  EKSTFSQTCSLLSQYIKEKGTFGDLTLGMTCTAETNGSPETSCHSATTMELFP--TIITQ 78

Query: 319 ETMKTTEFSAPM------------------------PKPNQMTIIYGGKVLVFDDVAEGK 426
               T +F +P                         PK  Q+TI Y G+V+VFDD    K
Sbjct: 79  RNPTTVDFLSPQTAYPHHSEVPIMVKSSAFKSMEKEPKAAQLTIFYAGQVVVFDDFPAEK 138

Query: 427 VKELMMFAGKGSPQINPTNLDLNAGNNVIN 516
           ++E+   AGKG  Q   T+   +  N  +N
Sbjct: 139 LEEITSLAGKGISQSQNTSAYAHTHNQQVN 168


>gb|ACU19759.1| unknown [Glycine max]
          Length = 240

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 32/150 (21%)
 Frame = +1

Query: 163 EKSNFSQTCNLLSQYLKEKXXXXXXXXXXXXPCDLGKSP--------AMDLFPQHTGFAE 318
           EKS FSQTC+LLSQY+KEK              +   SP         M+LFP  T   +
Sbjct: 21  EKSTFSQTCSLLSQYIKEKGTFGDLTLGMTCTAETNGSPETSCHSATTMELFP--TIITQ 78

Query: 319 ETMKTTEFSAPM------------------------PKPNQMTIIYGGKVLVFDDVAEGK 426
               T +F +P                         PK  Q+TI Y G+V+VFDD    K
Sbjct: 79  RNPTTVDFLSPQTAYPHHSEVPIMVKSSAFKSMEKEPKAAQLTIFYAGQVVVFDDFPAEK 138

Query: 427 VKELMMFAGKGSPQINPTNLDLNAGNNVIN 516
           ++E+   AGKG  Q   T+   +  N  +N
Sbjct: 139 LEEITSLAGKGISQSQNTSAYAHTHNQQVN 168


>gb|ACN26522.1| unknown [Zea mays] gi|414867160|tpg|DAA45717.1| TPA: putative tify
           domain/CCT motif transcription factor family protein
           [Zea mays]
          Length = 228

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/111 (36%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
 Frame = +1

Query: 169 SNFSQTCNLLSQYLKEKXXXXXXXXXXXXP--------CDLGKSPA----MDLFPQHTGF 312
           ++F+  C+LLS+Y+++                       D+ K       MDLFPQ  GF
Sbjct: 11  TSFAMACSLLSRYVRQNGAAAADLGLAIRAESDAKRTSTDMEKGETGKETMDLFPQIAGF 70

Query: 313 AEETMKTTEFSAPMPKPNQMTIIYGGKVLVFDDVAEGKVKELMMFAGKGSP 465
             E        A  P+  Q+TI YGGKVLVFDD    K K+LM  A KGSP
Sbjct: 71  GSEAATKEAPDAREPEKRQLTIFYGGKVLVFDDFPAEKAKDLMQMASKGSP 121


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