BLASTX nr result

ID: Coptis23_contig00003584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003584
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45702.1| unknown [Lotus japonicus]                              384   e-104
emb|CBI22797.3| unnamed protein product [Vitis vinifera]              382   e-103
ref|XP_002265093.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 i...   382   e-103
ref|XP_003632580.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 i...   377   e-102
ref|NP_001239831.1| uncharacterized protein LOC100793126 [Glycin...   376   e-102

>gb|AFK45702.1| unknown [Lotus japonicus]
          Length = 238

 Score =  384 bits (987), Expect = e-104
 Identities = 186/238 (78%), Positives = 202/238 (84%), Gaps = 2/238 (0%)
 Frame = -3

Query: 1014 ISSPPRTVEEIFKDYSGRRTGIIRALTFDVDEFYALCDPEKENLCLYGHPNDSWXXXXXX 835
            ++S PRTVEEIFKDY+ RR  I+RALT DVDEFY LCDP+KENLCLYGHPN+SW      
Sbjct: 1    MASSPRTVEEIFKDYTARRDAILRALTQDVDEFYGLCDPDKENLCLYGHPNESWEVTLPA 60

Query: 834  XXXXXXXXXXXLGINFARDGMVRRDWLSLVAMHSDSWLLSVAFYLAAPFNRNERKRLFNL 655
                       LGINFARDGM RRDWLSLVA+HSDSWLLSVAFYL A  NRNERKRLF+L
Sbjct: 61   EEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSL 120

Query: 654  INDLPTVFEVVTERKPVKEKPSVDSGSKSRLGTKRSSDGQVK--NNKLADEAYMEDEDEH 481
            INDLPTVFEVVTERKP+K+KP+VDSGSKSR GTKRSSDGQVK  N K ADE Y EDEDEH
Sbjct: 121  INDLPTVFEVVTERKPIKDKPTVDSGSKSRGGTKRSSDGQVKSSNPKFADEGYEEDEDEH 180

Query: 480  SETLCGTCGGNYNANEFWIGCDICERWYHGKCVKITPAKAENIKQYKCPSCSGMKKGR 307
            SETLCG+CGGNYNA+EFWIGCD+CERWYHGKCVKITPAKAE+IKQYKCPSCS MK+ R
Sbjct: 181  SETLCGSCGGNYNADEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCS-MKRSR 237


>emb|CBI22797.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  382 bits (980), Expect = e-103
 Identities = 181/240 (75%), Positives = 204/240 (85%), Gaps = 2/240 (0%)
 Frame = -3

Query: 1020 APISSPPRTVEEIFKDYSGRRTGIIRALTFDVDEFYALCDPEKENLCLYGHPNDSWXXXX 841
            A ISS PRTVEEIFKDYSGRR G++RALT+DVDEFY LCDPEKENLCLYGHPND+W    
Sbjct: 2    ASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWEVTL 61

Query: 840  XXXXXXXXXXXXXLGINFARDGMVRRDWLSLVAMHSDSWLLSVAFYLAAPFNRNERKRLF 661
                         LGINFARDGM R+DWLSLVA+HSDSWLLS AFYL A  NRNERKRLF
Sbjct: 62   PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERKRLF 121

Query: 660  NLINDLPTVFEVVTERKPVKEKPSVDSGSKSRLGTKRSSDGQVKNNK--LADEAYMEDED 487
            ++INDLPTVFEVVTERKP+K+KPSVDSGSKSR+ TKR ++GQVK+     ADE++ E+ED
Sbjct: 122  SMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKRGNEGQVKSTPKLAADESFEEEED 181

Query: 486  EHSETLCGTCGGNYNANEFWIGCDICERWYHGKCVKITPAKAENIKQYKCPSCSGMKKGR 307
            EHSETLCG+CGGNYNA+EFWIGCDICERW+HGKCVKITPAKAE+IKQYKCPSCS +K+ R
Sbjct: 182  EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCS-LKRSR 240


>ref|XP_002265093.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 isoform 1 [Vitis vinifera]
          Length = 243

 Score =  382 bits (980), Expect = e-103
 Identities = 181/240 (75%), Positives = 204/240 (85%), Gaps = 2/240 (0%)
 Frame = -3

Query: 1020 APISSPPRTVEEIFKDYSGRRTGIIRALTFDVDEFYALCDPEKENLCLYGHPNDSWXXXX 841
            A ISS PRTVEEIFKDYSGRR G++RALT+DVDEFY LCDPEKENLCLYGHPND+W    
Sbjct: 4    ASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWEVTL 63

Query: 840  XXXXXXXXXXXXXLGINFARDGMVRRDWLSLVAMHSDSWLLSVAFYLAAPFNRNERKRLF 661
                         LGINFARDGM R+DWLSLVA+HSDSWLLS AFYL A  NRNERKRLF
Sbjct: 64   PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERKRLF 123

Query: 660  NLINDLPTVFEVVTERKPVKEKPSVDSGSKSRLGTKRSSDGQVKNNK--LADEAYMEDED 487
            ++INDLPTVFEVVTERKP+K+KPSVDSGSKSR+ TKR ++GQVK+     ADE++ E+ED
Sbjct: 124  SMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKRGNEGQVKSTPKLAADESFEEEED 183

Query: 486  EHSETLCGTCGGNYNANEFWIGCDICERWYHGKCVKITPAKAENIKQYKCPSCSGMKKGR 307
            EHSETLCG+CGGNYNA+EFWIGCDICERW+HGKCVKITPAKAE+IKQYKCPSCS +K+ R
Sbjct: 184  EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCS-LKRSR 242


>ref|XP_003632580.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 isoform 3 [Vitis vinifera]
          Length = 244

 Score =  377 bits (968), Expect = e-102
 Identities = 181/241 (75%), Positives = 204/241 (84%), Gaps = 3/241 (1%)
 Frame = -3

Query: 1020 APISSPPRTVEEIFKDYSGRRTGIIRALTFDVDEFYALCDPEKENLCLYGHPNDSWXXXX 841
            A ISS PRTVEEIFKDYSGRR G++RALT+DVDEFY LCDPEKENLCLYGHPND+W    
Sbjct: 4    ASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWEVTL 63

Query: 840  XXXXXXXXXXXXXLGINFARDGMVRRDWLSLVAMHSDSWLLSVAFYLAAPFNRNERKRLF 661
                         LGINFARDGM R+DWLSLVA+HSDSWLLS AFYL A  NRNERKRLF
Sbjct: 64   PAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERKRLF 123

Query: 660  NLINDLPTVFEVVTERKPVKEKPSVDSGSKSRLGTK-RSSDGQVKNNK--LADEAYMEDE 490
            ++INDLPTVFEVVTERKP+K+KPSVDSGSKSR+ TK R ++GQVK+     ADE++ E+E
Sbjct: 124  SMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKVRGNEGQVKSTPKLAADESFEEEE 183

Query: 489  DEHSETLCGTCGGNYNANEFWIGCDICERWYHGKCVKITPAKAENIKQYKCPSCSGMKKG 310
            DEHSETLCG+CGGNYNA+EFWIGCDICERW+HGKCVKITPAKAE+IKQYKCPSCS +K+ 
Sbjct: 184  DEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCS-LKRS 242

Query: 309  R 307
            R
Sbjct: 243  R 243


>ref|NP_001239831.1| uncharacterized protein LOC100793126 [Glycine max]
            gi|255635147|gb|ACU17930.1| unknown [Glycine max]
          Length = 238

 Score =  376 bits (965), Expect = e-102
 Identities = 182/237 (76%), Positives = 203/237 (85%), Gaps = 1/237 (0%)
 Frame = -3

Query: 1014 ISSPPRTVEEIFKDYSGRRTGIIRALTFDVDEFYALCDPEKENLCLYGHPNDSWXXXXXX 835
            ++S PRTVEEIFKDY+ RRT I+RAL+ DVDEFY LCDP+KENLCLYGHPN++W      
Sbjct: 3    MTSTPRTVEEIFKDYTARRTAIVRALSQDVDEFYGLCDPDKENLCLYGHPNETWEVTLPA 62

Query: 834  XXXXXXXXXXXLGINFARDGMVRRDWLSLVAMHSDSWLLSVAFYLAAPFNRNERKRLFNL 655
                       LGINFARDGM RRDWLSLVA+HSDSWLLSVAFYL A  NRNERKRLF+L
Sbjct: 63   EEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSL 122

Query: 654  INDLPTVFEVVTERKPVKEKPSVDSGSKSRLGTKRSSDGQVKNN-KLADEAYMEDEDEHS 478
            INDLPTVFEVVTERKPVK+KP+ DSGSKSR  TKRSSDGQVK+N K ADE Y E+EDEHS
Sbjct: 123  INDLPTVFEVVTERKPVKDKPTADSGSKSRGSTKRSSDGQVKSNPKFADEGY-EEEDEHS 181

Query: 477  ETLCGTCGGNYNANEFWIGCDICERWYHGKCVKITPAKAENIKQYKCPSCSGMKKGR 307
            ETLCG+CGGNYNA+EFWIGCDICERW+HGKCVKITPAKAE+IKQYKCPSCS +++GR
Sbjct: 182  ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCS-LRRGR 237


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