BLASTX nr result

ID: Coptis23_contig00003571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003571
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284485.1| PREDICTED: uncharacterized protein LOC100249...   381   e-103
ref|XP_002314801.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_003589653.1| hypothetical protein MTR_1g031620 [Medicago ...   371   e-100
ref|XP_002526033.1| conserved hypothetical protein [Ricinus comm...   367   3e-99
ref|XP_002887333.1| hypothetical protein ARALYDRAFT_476225 [Arab...   356   6e-96

>ref|XP_002284485.1| PREDICTED: uncharacterized protein LOC100249059 [Vitis vinifera]
           gi|147801559|emb|CAN77015.1| hypothetical protein
           VITISV_036885 [Vitis vinifera]
           gi|297737691|emb|CBI26892.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  381 bits (978), Expect = e-103
 Identities = 187/250 (74%), Positives = 217/250 (86%)
 Frame = +3

Query: 66  MSPQTKQSSGKSLKGIHGVHMVPHSPFPLKEDSQCGYLHHSTYYEGSSTEDNRRLFMLRL 245
           MS Q+K +  ++L G+HGV +VPHSPF L+E ++ G    ST  E SS E N+RL M ++
Sbjct: 1   MSHQSKSNPSRALDGVHGVRVVPHSPFALEEITKPGDFDRSTC-ERSSIEANQRLLM-QV 58

Query: 246 WQQRPACFRPIRCCLQGDQHVVETIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGV 425
           WQQRPAC RP+RCCL GD+ + ET+ANVLTSLPFIALGIQAPRKN N KLYANSLIGVG+
Sbjct: 59  WQQRPACLRPVRCCLNGDESLGETVANVLTSLPFIALGIQAPRKNLNCKLYANSLIGVGI 118

Query: 426 ASSLYHSSRGELRKYLRWADYTMIATATVCLSRALSNENPKLLMAASALFLPVQPLMVSA 605
           AS LYHSSRG+LRKYLRWADYTMIATATVCLSRA+ NENPKLLMAASA FLP+QPLMVSA
Sbjct: 119 ASGLYHSSRGKLRKYLRWADYTMIATATVCLSRAIRNENPKLLMAASAFFLPIQPLMVSA 178

Query: 606 VHTGMMEVAFAKRALSEPELKMAYNVHKMSSLLGGVLFVADDLYPQTPYLHAAWHLAAAV 785
           VHTGMMEVAFAKRAL +P+L+M +NVHKMSSLLGG LF+ADD++P+TP++HAAWHLAAAV
Sbjct: 179 VHTGMMEVAFAKRALDDPDLRMVHNVHKMSSLLGGALFIADDVFPRTPFIHAAWHLAAAV 238

Query: 786 GVSTCNKLLE 815
           GV TCNKLLE
Sbjct: 239 GVGTCNKLLE 248


>ref|XP_002314801.1| predicted protein [Populus trichocarpa] gi|222863841|gb|EEF00972.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  377 bits (967), Expect = e-102
 Identities = 184/250 (73%), Positives = 212/250 (84%)
 Frame = +3

Query: 66  MSPQTKQSSGKSLKGIHGVHMVPHSPFPLKEDSQCGYLHHSTYYEGSSTEDNRRLFMLRL 245
           MS Q+  +  K+L+G+HG+H+VPHSPF LKE +Q G    ST  E S    N+ L M R+
Sbjct: 1   MSHQSTFNPSKTLEGVHGIHVVPHSPFALKEINQQGDFPQSTC-ESSGNGLNQLLLMQRV 59

Query: 246 WQQRPACFRPIRCCLQGDQHVVETIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGV 425
           WQQRP C RPI+ C+ GDQH+ ET+ANV+TSLPFIALGIQAPRKN NTKLYANSLIGVGV
Sbjct: 60  WQQRPGCLRPIQGCIHGDQHLAETVANVITSLPFIALGIQAPRKNLNTKLYANSLIGVGV 119

Query: 426 ASSLYHSSRGELRKYLRWADYTMIATATVCLSRALSNENPKLLMAASALFLPVQPLMVSA 605
           ASSLYHSSRG+LRKYLRW DYTMIATATVCLSRAL NENPK LMAASA  LP+QPLMVSA
Sbjct: 120 ASSLYHSSRGKLRKYLRWFDYTMIATATVCLSRALRNENPKFLMAASAALLPIQPLMVSA 179

Query: 606 VHTGMMEVAFAKRALSEPELKMAYNVHKMSSLLGGVLFVADDLYPQTPYLHAAWHLAAAV 785
           +HTGMMEVAFAKRAL +P+L+MA+N+HKMSSLLGGVLF+ADD +P TP+LHA WHLAAA+
Sbjct: 180 IHTGMMEVAFAKRALKDPDLRMAHNLHKMSSLLGGVLFIADDCFPSTPFLHAGWHLAAAI 239

Query: 786 GVSTCNKLLE 815
           GV TCNKLL+
Sbjct: 240 GVGTCNKLLK 249


>ref|XP_003589653.1| hypothetical protein MTR_1g031620 [Medicago truncatula]
           gi|217071696|gb|ACJ84208.1| unknown [Medicago
           truncatula] gi|355478701|gb|AES59904.1| hypothetical
           protein MTR_1g031620 [Medicago truncatula]
           gi|388519567|gb|AFK47845.1| unknown [Medicago
           truncatula]
          Length = 251

 Score =  371 bits (953), Expect = e-100
 Identities = 185/252 (73%), Positives = 211/252 (83%), Gaps = 2/252 (0%)
 Frame = +3

Query: 66  MSPQTKQSSGKSLKGIHGVHMVPHSPFPLKEDSQCGYLHHSTYYEGSSTEDNRRLFMLRL 245
           MS Q   +  ++L+G+HGVH+VPHSPF L E +Q G LH ST    S+TE N+ L M R+
Sbjct: 1   MSQQRTLNHSRALEGVHGVHVVPHSPFSLTESNQTGGLHPSTGGP-STTEANQLLLMQRV 59

Query: 246 WQQRPACFRPIRCCLQ--GDQHVVETIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGV 419
           WQQRPAC RPI C     GDQH+ ETIANVLTS+PFIALG+ APRKN + KLYANSLIGV
Sbjct: 60  WQQRPACLRPIHCSASCHGDQHLAETIANVLTSIPFIALGVNAPRKNLSCKLYANSLIGV 119

Query: 420 GVASSLYHSSRGELRKYLRWADYTMIATATVCLSRALSNENPKLLMAASALFLPVQPLMV 599
           GVASS+YH SRG+LRKYLRW DYTMIAT TVCLSRAL NENPKLLMAASA FLPV PLMV
Sbjct: 120 GVASSVYHCSRGKLRKYLRWLDYTMIATTTVCLSRALRNENPKLLMAASAAFLPVNPLMV 179

Query: 600 SAVHTGMMEVAFAKRALSEPELKMAYNVHKMSSLLGGVLFVADDLYPQTPYLHAAWHLAA 779
           + +HTGMMEVAFAKRAL +P+L+MA+ VHKMSSL+GG+LFVADDL+P+TPYLHAAWHLAA
Sbjct: 180 TLIHTGMMEVAFAKRALKDPDLRMAHTVHKMSSLMGGMLFVADDLFPKTPYLHAAWHLAA 239

Query: 780 AVGVSTCNKLLE 815
           AVGV TCNKLLE
Sbjct: 240 AVGVGTCNKLLE 251


>ref|XP_002526033.1| conserved hypothetical protein [Ricinus communis]
           gi|223534680|gb|EEF36373.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 262

 Score =  367 bits (943), Expect = 3e-99
 Identities = 175/250 (70%), Positives = 208/250 (83%)
 Frame = +3

Query: 66  MSPQTKQSSGKSLKGIHGVHMVPHSPFPLKEDSQCGYLHHSTYYEGSSTEDNRRLFMLRL 245
           M+ Q+  +  K+L+G+HG+H+VPHSPF L+E +  G    ST         N++L + R 
Sbjct: 14  MNRQSTTNPSKALEGVHGIHVVPHSPFALEEITHQGDFSQSTC-GNLVNRANQQLLLQRA 72

Query: 246 WQQRPACFRPIRCCLQGDQHVVETIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGV 425
           W+QRP C RPIRCC+ GD+H+ ET+ANVLTSLPFIALG+QAPRKN  TK+YANSLIGVGV
Sbjct: 73  WEQRPGCLRPIRCCINGDKHLAETVANVLTSLPFIALGLQAPRKNLTTKMYANSLIGVGV 132

Query: 426 ASSLYHSSRGELRKYLRWADYTMIATATVCLSRALSNENPKLLMAASALFLPVQPLMVSA 605
           ASSLYHSSRG +RKYLRW DYTMIAT TVCLSRAL NENPKLLMAASA  LP++PLMVS 
Sbjct: 133 ASSLYHSSRGRIRKYLRWLDYTMIATTTVCLSRALRNENPKLLMAASAALLPIKPLMVSV 192

Query: 606 VHTGMMEVAFAKRALSEPELKMAYNVHKMSSLLGGVLFVADDLYPQTPYLHAAWHLAAAV 785
           VHTGMMEVAFAKRAL +P+L+MA+N+HKMSSLLGGVLF+ADDL+P TP++HA WH+AAAV
Sbjct: 193 VHTGMMEVAFAKRALKDPDLRMAHNLHKMSSLLGGVLFIADDLFPSTPFIHAGWHIAAAV 252

Query: 786 GVSTCNKLLE 815
           GV TCNKLLE
Sbjct: 253 GVGTCNKLLE 262


>ref|XP_002887333.1| hypothetical protein ARALYDRAFT_476225 [Arabidopsis lyrata subsp.
           lyrata] gi|297333174|gb|EFH63592.1| hypothetical protein
           ARALYDRAFT_476225 [Arabidopsis lyrata subsp. lyrata]
          Length = 244

 Score =  356 bits (914), Expect = 6e-96
 Identities = 172/250 (68%), Positives = 206/250 (82%)
 Frame = +3

Query: 66  MSPQTKQSSGKSLKGIHGVHMVPHSPFPLKEDSQCGYLHHSTYYEGSSTEDNRRLFMLRL 245
           MSPQ+  ++ KSL+G+HGVH+V HS F  +   Q       + YE +     +RLF+ R+
Sbjct: 1   MSPQSVSTTSKSLEGVHGVHVVSHSHFGFESIGQV------SSYESADAGTKQRLFIERV 54

Query: 246 WQQRPACFRPIRCCLQGDQHVVETIANVLTSLPFIALGIQAPRKNWNTKLYANSLIGVGV 425
           WQQRP C RPI C + GDQ ++ET ANV+TS+PFI LG+QAPRKN N K+YANSLIGVG+
Sbjct: 55  WQQRPPCLRPIHCSIHGDQSILETAANVITSIPFIFLGMQAPRKNLNMKVYANSLIGVGI 114

Query: 426 ASSLYHSSRGELRKYLRWADYTMIATATVCLSRALSNENPKLLMAASALFLPVQPLMVSA 605
           ASSLYHSSRG+LRKYLRWADYTMIATATVCL+RAL  ENPK LMAASAL LP QPL+VSA
Sbjct: 115 ASSLYHSSRGKLRKYLRWADYTMIATATVCLTRALREENPKFLMAASALALPFQPLVVSA 174

Query: 606 VHTGMMEVAFAKRALSEPELKMAYNVHKMSSLLGGVLFVADDLYPQTPYLHAAWHLAAAV 785
           VHTGMMEVAFAKRAL +P+LKMA++VHKMSSLLGG LF+ADDL+P+TP++HA WHLAAA+
Sbjct: 175 VHTGMMEVAFAKRALEDPDLKMAHDVHKMSSLLGGALFIADDLFPETPFIHAGWHLAAAI 234

Query: 786 GVSTCNKLLE 815
           GV TCNKLL+
Sbjct: 235 GVGTCNKLLQ 244


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