BLASTX nr result
ID: Coptis23_contig00003568
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003568
(1772 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003629476.1| Zinc finger protein [Medicago truncatula] gi... 370 e-103
ref|XP_002281605.1| PREDICTED: uncharacterized protein LOC100260... 373 e-103
emb|CBI19670.3| unnamed protein product [Vitis vinifera] 373 e-103
ref|XP_003629477.1| Zinc finger protein [Medicago truncatula] gi... 361 1e-98
dbj|BAJ34296.1| unnamed protein product [Thellungiella halophila] 337 9e-93
>ref|XP_003629476.1| Zinc finger protein [Medicago truncatula] gi|355523498|gb|AET03952.1|
Zinc finger protein [Medicago truncatula]
Length = 519
Score = 370 bits (950), Expect(2) = e-103
Identities = 229/480 (47%), Positives = 281/480 (58%), Gaps = 44/480 (9%)
Frame = +3
Query: 204 GMPDPEAEVISLSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVV 383
GMPDPEAEVI+LSP TL+ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+KE+
Sbjct: 40 GMPDPEAEVIALSPTTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEI- 98
Query: 384 RKRVYVCPEPTCIHHDPKRALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHGK 563
RKRVYVCPEPTC+HHDP RALGDLTGIKKHF RKHGE YAVQSDWKAH K
Sbjct: 99 RKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSK 158
Query: 564 TCGSKEYKCDCGTVFSRRDSFVTHRAFCDALADETSRKDXXXXXKL-----QKLALXXXX 728
CGS+EYKCDCGTVFSRRDSF+THRAFCDALA+E ++ K K+
Sbjct: 159 VCGSREYKCDCGTVFSRRDSFITHRAFCDALAEENAKSQNQAVGKANSESDSKVLTGDSL 218
Query: 729 XXXXXXXXXMA--QPVENTGQTELPIYQKTELPKNPVGHFQ------------LNPPLAG 866
A P N+G + QK +LP+NP + LN +
Sbjct: 219 PAVITTTAAAAATTPQSNSGVSSALETQKLDLPENPPQIIEEPQVVVTTTASALNASCSS 278
Query: 867 --VNXXXXXXXXXXXMFNSVFGS---ALSGNLQPQPSSFSDLV----CVASRESTSVTEP 1019
+ +F S+F S + S +LQPQ +FSDL+ C R T + P
Sbjct: 279 STSSKSNGCAATSTGVFASLFASSTASASASLQPQAPAFSDLIRSMGCTDPR-PTDFSAP 337
Query: 1020 P-----LLRLSSNSGFTLFGTTGKDSSQFARPSQ-PAMSATALLQKAAEMGATASNPSLL 1181
P L LS++ G ++FGT G++ Q+ Q PAMSATALLQKAA+MGA A+N SLL
Sbjct: 338 PSSEAISLCLSTSHGSSIFGTGGQECRQYVPTHQPPAMSATALLQKAAQMGAAATNASLL 397
Query: 1182 RGFNM---SVASSSGQQETLQWNVG-------HEMNTASASGHPTEGGVGLTELVTGPSL 1331
RG + S ++SSGQQ++L W +G ++ G P + GL EL+ G
Sbjct: 398 RGLGIVSSSASTSSGQQDSLHWGLGPMEPEGSSLVSAGLGLGLPCDADSGLKELMLGTPS 457
Query: 1332 LFGSKLPTHDFXXXXXXXXXXXXXXXXVSALYSSMRGTAVGGRLDVVDGTASSIAEGNSE 1511
+FG K T DF +SAL +S+ G G LDV TA++ + GN E
Sbjct: 458 MFGPKQTTLDF--LGLGMAAGGSAGGGLSALITSIGG---GSGLDV---TAAAASFGNGE 509
Score = 33.9 bits (76), Expect(2) = e-103
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 5/31 (16%)
Frame = +1
Query: 46 LAKNSTNNTEA-----VKRKRNLPGMPDPEA 123
++ + NN ++ K+KRNLPGMPDPEA
Sbjct: 16 ISSSGNNNIQSPIPKPTKKKRNLPGMPDPEA 46
>ref|XP_002281605.1| PREDICTED: uncharacterized protein LOC100260826 [Vitis vinifera]
Length = 505
Score = 373 bits (957), Expect(2) = e-103
Identities = 232/473 (49%), Positives = 278/473 (58%), Gaps = 35/473 (7%)
Frame = +3
Query: 204 GMPDPEAEVISLSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVV 383
G PDP+AEVI+LSPKTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLRQR++KEV
Sbjct: 44 GTPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEV- 102
Query: 384 RKRVYVCPEPTCIHHDPKRALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHGK 563
RKRVYVCPEPTC+HHDP RALGDLTGIKKHF RKHGE YAVQSDWKAH K
Sbjct: 103 RKRVYVCPEPTCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHLK 162
Query: 564 TCGSKEYKCDCGTVFSRRDSFVTHRAFCDALADETSRKDXXXXXKLQKLALXXXXXXXXX 743
TCG++EYKCDCGT+FSRRDSF+THRAFCDALA E++R Q L
Sbjct: 163 TCGTREYKCDCGTLFSRRDSFITHRAFCDALAQESAR--------AQVLPSTNTEENPEI 214
Query: 744 XXXXMAQPVENTGQTELPIYQK--TELPKNPVGHFQLNPPLAGVNXXXXXXXXXXXMFNS 917
+ P + T + Q ++ +NPVG Q P A ++ S
Sbjct: 215 ETAVSSSPTALSPSTTVLSIQSPGADMTENPVGVLQQAP--ATISLTTGTVTSSSSSSTS 272
Query: 918 VFGSALSGNLQP---QP----SSFSDLVCVASRESTSVTEP------PLLRLS-----SN 1043
VF S + + P QP S+FSDL+C R S T P P LRLS SN
Sbjct: 273 VFASIFAPSTTPVTSQPPQSSSTFSDLICAMGRSKRSTTLPSSSTAEPTLRLSSSLYLSN 332
Query: 1044 SGFTLFGTTGKDSSQFARPSQPAMSATALLQKAAEMGATASNPSLLRGFNMSVASSSGQQ 1223
S +LF T ++ +A QPAMSATALLQKAA+MGA ASN SLLRG ++++ SS Q
Sbjct: 333 SASSLFPTPDQNHRHYAPSPQPAMSATALLQKAAQMGAAASNASLLRGLGLAMSPSSSAQ 392
Query: 1224 E---TLQWNVGH---EMNTASAS---GHPTEGGVGLTELVTGPSLLFGSKLPTHDFXXXX 1376
+ T QW+ GH + N A G P+EGG LT L+ PS LF +K T D
Sbjct: 393 QDSSTTQWS-GHVKADSNPVGAGLGLGLPSEGGPALTGLMMSPSSLFVNKPTTLDL--LG 449
Query: 1377 XXXXXXXXXXXXVSALYSSMRGTAVGGRLDVV------DGTASSIAEGNSEAK 1517
+SAL +S+ GG LD+ G A++ AE + K
Sbjct: 450 LGMVPGGASTAGLSALLTSIS----GGGLDIAAAGSPFGGAAAATAEAAPDRK 498
Score = 29.6 bits (65), Expect(2) = e-103
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 82 KRKRNLPGMPDPEA 123
K+KRNLPG PDP+A
Sbjct: 37 KKKRNLPGTPDPDA 50
>emb|CBI19670.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 373 bits (957), Expect(2) = e-103
Identities = 232/473 (49%), Positives = 278/473 (58%), Gaps = 35/473 (7%)
Frame = +3
Query: 204 GMPDPEAEVISLSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVV 383
G PDP+AEVI+LSPKTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLRQR++KEV
Sbjct: 35 GTPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEV- 93
Query: 384 RKRVYVCPEPTCIHHDPKRALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHGK 563
RKRVYVCPEPTC+HHDP RALGDLTGIKKHF RKHGE YAVQSDWKAH K
Sbjct: 94 RKRVYVCPEPTCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHLK 153
Query: 564 TCGSKEYKCDCGTVFSRRDSFVTHRAFCDALADETSRKDXXXXXKLQKLALXXXXXXXXX 743
TCG++EYKCDCGT+FSRRDSF+THRAFCDALA E++R Q L
Sbjct: 154 TCGTREYKCDCGTLFSRRDSFITHRAFCDALAQESAR--------AQVLPSTNTEENPEI 205
Query: 744 XXXXMAQPVENTGQTELPIYQK--TELPKNPVGHFQLNPPLAGVNXXXXXXXXXXXMFNS 917
+ P + T + Q ++ +NPVG Q P A ++ S
Sbjct: 206 ETAVSSSPTALSPSTTVLSIQSPGADMTENPVGVLQQAP--ATISLTTGTVTSSSSSSTS 263
Query: 918 VFGSALSGNLQP---QP----SSFSDLVCVASRESTSVTEP------PLLRLS-----SN 1043
VF S + + P QP S+FSDL+C R S T P P LRLS SN
Sbjct: 264 VFASIFAPSTTPVTSQPPQSSSTFSDLICAMGRSKRSTTLPSSSTAEPTLRLSSSLYLSN 323
Query: 1044 SGFTLFGTTGKDSSQFARPSQPAMSATALLQKAAEMGATASNPSLLRGFNMSVASSSGQQ 1223
S +LF T ++ +A QPAMSATALLQKAA+MGA ASN SLLRG ++++ SS Q
Sbjct: 324 SASSLFPTPDQNHRHYAPSPQPAMSATALLQKAAQMGAAASNASLLRGLGLAMSPSSSAQ 383
Query: 1224 E---TLQWNVGH---EMNTASAS---GHPTEGGVGLTELVTGPSLLFGSKLPTHDFXXXX 1376
+ T QW+ GH + N A G P+EGG LT L+ PS LF +K T D
Sbjct: 384 QDSSTTQWS-GHVKADSNPVGAGLGLGLPSEGGPALTGLMMSPSSLFVNKPTTLDL--LG 440
Query: 1377 XXXXXXXXXXXXVSALYSSMRGTAVGGRLDVV------DGTASSIAEGNSEAK 1517
+SAL +S+ GG LD+ G A++ AE + K
Sbjct: 441 LGMVPGGASTAGLSALLTSIS----GGGLDIAAAGSPFGGAAAATAEAAPDRK 489
Score = 29.6 bits (65), Expect(2) = e-103
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 82 KRKRNLPGMPDPEA 123
K+KRNLPG PDP+A
Sbjct: 28 KKKRNLPGTPDPDA 41
>ref|XP_003629477.1| Zinc finger protein [Medicago truncatula] gi|355523499|gb|AET03953.1|
Zinc finger protein [Medicago truncatula]
Length = 517
Score = 361 bits (926), Expect(2) = 1e-98
Identities = 225/476 (47%), Positives = 277/476 (58%), Gaps = 44/476 (9%)
Frame = +3
Query: 216 PEAEVISLSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVVRKRV 395
PEAEVI+LSP TL+ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+KE+ RKRV
Sbjct: 42 PEAEVIALSPTTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEI-RKRV 100
Query: 396 YVCPEPTCIHHDPKRALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHGKTCGS 575
YVCPEPTC+HHDP RALGDLTGIKKHF RKHGE YAVQSDWKAH K CGS
Sbjct: 101 YVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGS 160
Query: 576 KEYKCDCGTVFSRRDSFVTHRAFCDALADETSRKDXXXXXKL-----QKLALXXXXXXXX 740
+EYKCDCGTVFSRRDSF+THRAFCDALA+E ++ K K+
Sbjct: 161 REYKCDCGTVFSRRDSFITHRAFCDALAEENAKSQNQAVGKANSESDSKVLTGDSLPAVI 220
Query: 741 XXXXXMA--QPVENTGQTELPIYQKTELPKNPVGHFQ------------LNPPLAG--VN 872
A P N+G + QK +LP+NP + LN + +
Sbjct: 221 TTTAAAAATTPQSNSGVSSALETQKLDLPENPPQIIEEPQVVVTTTASALNASCSSSTSS 280
Query: 873 XXXXXXXXXXXMFNSVFGS---ALSGNLQPQPSSFSDLV----CVASRESTSVTEPP--- 1022
+F S+F S + S +LQPQ +FSDL+ C R T + PP
Sbjct: 281 KSNGCAATSTGVFASLFASSTASASASLQPQAPAFSDLIRSMGCTDPR-PTDFSAPPSSE 339
Query: 1023 --LLRLSSNSGFTLFGTTGKDSSQFARPSQ-PAMSATALLQKAAEMGATASNPSLLRGFN 1193
L LS++ G ++FGT G++ Q+ Q PAMSATALLQKAA+MGA A+N SLLRG
Sbjct: 340 AISLCLSTSHGSSIFGTGGQECRQYVPTHQPPAMSATALLQKAAQMGAAATNASLLRGLG 399
Query: 1194 M---SVASSSGQQETLQWNVG-------HEMNTASASGHPTEGGVGLTELVTGPSLLFGS 1343
+ S ++SSGQQ++L W +G ++ G P + GL EL+ G +FG
Sbjct: 400 IVSSSASTSSGQQDSLHWGLGPMEPEGSSLVSAGLGLGLPCDADSGLKELMLGTPSMFGP 459
Query: 1344 KLPTHDFXXXXXXXXXXXXXXXXVSALYSSMRGTAVGGRLDVVDGTASSIAEGNSE 1511
K T DF +SAL +S+ G G LDV TA++ + GN E
Sbjct: 460 KQTTLDF--LGLGMAAGGSAGGGLSALITSIGG---GSGLDV---TAAAASFGNGE 507
Score = 27.7 bits (60), Expect(2) = 1e-98
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Frame = +1
Query: 46 LAKNSTNNTEA-----VKRKRNLPGMPDPE 120
++ + NN ++ K+KRNLPGMP+ E
Sbjct: 16 ISSSGNNNIQSPIPKPTKKKRNLPGMPEAE 45
>dbj|BAJ34296.1| unnamed protein product [Thellungiella halophila]
Length = 464
Score = 337 bits (864), Expect(2) = 9e-93
Identities = 199/397 (50%), Positives = 246/397 (61%), Gaps = 10/397 (2%)
Frame = +3
Query: 204 GMPDPEAEVISLSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVV 383
GMPDPE+EVI+LSPKTL+ATNRF+CEIC+KGFQRDQNLQLHRRGHNLPWKLRQ+S+KEV
Sbjct: 39 GMPDPESEVIALSPKTLLATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLRQKSSKEV- 97
Query: 384 RKRVYVCPEPTCIHHDPKRALGDLTGIKKHFSRKHGEXXXXXXXXXXXYAVQSDWKAHGK 563
RK+VYVCPE +C+HHDP RALGDLTGIKKHF RKHGE YAV SDWKAH K
Sbjct: 98 RKKVYVCPEISCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVVSDWKAHSK 157
Query: 564 TCGSKEYKCDCGTVFSRRDSFVTHRAFCDALADETSRKDXXXXXKLQKLALXXXXXXXXX 743
CG+KEYKCDCGT+FSRRDSF+THRAFCDALA+E++R K + L
Sbjct: 158 ICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESARSHNNPSKKQNPVVLPRKKPVPDP 217
Query: 744 XXXXMAQ--------PVE-NTGQTELPIYQKTELPKNPVGHFQLNPPLAGVNXXXXXXXX 896
A PV+ + + + P +++E PK P Q P G+N
Sbjct: 218 KSVAAANSPSSPNLAPVDTQSAKIKSPPIKRSESPKTPPETLQEAPKPTGLN------VT 271
Query: 897 XXXMFNSVF-GSALSGNLQPQPSSFSDLVCVASRESTSVTEPPLLRLSSNSGFTLFGTTG 1073
+F +F S+ S ++ SS S S+S+ EP L LS++ G + G+T
Sbjct: 272 RNGVFAGLFESSSASPSIYTSSSSSSSSSQSLFAPSSSI-EPISLGLSTSHGSSFLGST- 329
Query: 1074 KDSSQFARPSQPAMSATALLQKAAEMGATASNPSLLRGFNMSVASSSGQQETLQWNVGHE 1253
P+QPAMSATALLQKAA+MGAT+S SLLRG + V+SSS +++ V H
Sbjct: 330 ------RFPTQPAMSATALLQKAAQMGATSSGGSLLRGLGI-VSSSSPSMDSI---VPHG 379
Query: 1254 MNTASASGHPTEGGVGLTELVTGPSLLFGSKLPTHDF 1364
+ G E GL EL+ G S +FG K T DF
Sbjct: 380 LGLGLPCG--GESSSGLKELMMGNSSVFGPKQTTLDF 414
Score = 32.0 bits (71), Expect(2) = 9e-93
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 82 KRKRNLPGMPDPEA 123
K+KRNLPGMPDPE+
Sbjct: 32 KKKRNLPGMPDPES 45