BLASTX nr result
ID: Coptis23_contig00003567
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00003567 (656 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002336390.1| predicted protein [Populus trichocarpa] gi|2... 177 2e-47 ref|XP_002307920.1| predicted protein [Populus trichocarpa] gi|2... 176 1e-46 ref|XP_003543999.1| PREDICTED: UPF0586 protein C9orf41 homolog [... 176 2e-46 ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852... 172 9e-46 emb|CBI39364.3| unnamed protein product [Vitis vinifera] 172 9e-46 >ref|XP_002336390.1| predicted protein [Populus trichocarpa] gi|222834882|gb|EEE73331.1| predicted protein [Populus trichocarpa] Length = 282 Score = 177 bits (450), Expect(2) = 2e-47 Identities = 87/97 (89%), Positives = 89/97 (91%), Gaps = 2/97 (2%) Frame = +1 Query: 1 VSFPDIHPASAGITEGFSMCGGDFVEVYSDSNQEGAWDAVVTCFFLDTAHNIVEYIEIIS 180 VSFPDIHPASAGITEGFSMCGGDFVEVYSD +Q G WDAVVTCFF+DTAHNIVEYIEIIS Sbjct: 133 VSFPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGVWDAVVTCFFIDTAHNIVEYIEIIS 192 Query: 181 RILKD--VWINLGPLLYHSADAYGTEDEMSIELSLED 285 RILKD VWINLGPLLYH AD YG EDEMSIELSLED Sbjct: 193 RILKDGGVWINLGPLLYHFADMYGQEDEMSIELSLED 229 Score = 37.4 bits (85), Expect(2) = 2e-47 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +3 Query: 360 NPQAMMQNQYNAAFWTMTKK 419 NP++MMQN+Y AAFWTM KK Sbjct: 254 NPRSMMQNRYFAAFWTMRKK 273 >ref|XP_002307920.1| predicted protein [Populus trichocarpa] gi|222853896|gb|EEE91443.1| predicted protein [Populus trichocarpa] Length = 281 Score = 176 bits (445), Expect(2) = 1e-46 Identities = 86/97 (88%), Positives = 88/97 (90%), Gaps = 2/97 (2%) Frame = +1 Query: 1 VSFPDIHPASAGITEGFSMCGGDFVEVYSDSNQEGAWDAVVTCFFLDTAHNIVEYIEIIS 180 VS PDIHPASAGITEGFSMCGGDFVEVYSD +Q G WDAVVTCFF+DTAHNIVEYIEIIS Sbjct: 141 VSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGVWDAVVTCFFIDTAHNIVEYIEIIS 200 Query: 181 RILKD--VWINLGPLLYHSADAYGTEDEMSIELSLED 285 RILKD VWINLGPLLYH AD YG EDEMSIELSLED Sbjct: 201 RILKDGGVWINLGPLLYHFADVYGQEDEMSIELSLED 237 Score = 36.6 bits (83), Expect(2) = 1e-46 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = +3 Query: 360 NPQAMMQNQYNAAFWTMTKK 419 NP+AMMQN+Y AFWTM KK Sbjct: 262 NPRAMMQNRYFPAFWTMRKK 281 >ref|XP_003543999.1| PREDICTED: UPF0586 protein C9orf41 homolog [Glycine max] Length = 456 Score = 176 bits (446), Expect(2) = 2e-46 Identities = 86/97 (88%), Positives = 90/97 (92%), Gaps = 2/97 (2%) Frame = +1 Query: 1 VSFPDIHPASAGITEGFSMCGGDFVEVYSDSNQEGAWDAVVTCFFLDTAHNIVEYIEIIS 180 VS PDIHPASAGITEGFSMCGGDFVEVYSDS+Q GAWDAVVTCFF+DTAHNIVEYIEIIS Sbjct: 307 VSIPDIHPASAGITEGFSMCGGDFVEVYSDSSQIGAWDAVVTCFFIDTAHNIVEYIEIIS 366 Query: 181 RILKD--VWINLGPLLYHSADAYGTEDEMSIELSLED 285 +ILKD VWINLGPLLYH AD YG +DEMSIELSLED Sbjct: 367 KILKDGGVWINLGPLLYHFADMYGQDDEMSIELSLED 403 Score = 35.8 bits (81), Expect(2) = 2e-46 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = +3 Query: 357 ANPQAMMQNQYNAAFWTMTKK 419 AN ++MMQN+Y AAFWTM KK Sbjct: 427 ANSRSMMQNRYFAAFWTMRKK 447 >ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852521 [Vitis vinifera] Length = 611 Score = 172 bits (436), Expect(2) = 9e-46 Identities = 84/97 (86%), Positives = 87/97 (89%), Gaps = 2/97 (2%) Frame = +1 Query: 1 VSFPDIHPASAGITEGFSMCGGDFVEVYSDSNQEGAWDAVVTCFFLDTAHNIVEYIEIIS 180 VS PD+HPASAGITEGFSMCGGDFVEVYSD +Q G WDAVVTCFF+DTAHNIVEYIEIIS Sbjct: 467 VSIPDMHPASAGITEGFSMCGGDFVEVYSDPSQIGVWDAVVTCFFIDTAHNIVEYIEIIS 526 Query: 181 RILKD--VWINLGPLLYHSADAYGTEDEMSIELSLED 285 RILKD VWIN GPLLYH AD YG EDEMSIELSLED Sbjct: 527 RILKDGGVWINFGPLLYHFADMYGQEDEMSIELSLED 563 Score = 37.4 bits (85), Expect(2) = 9e-46 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +3 Query: 360 NPQAMMQNQYNAAFWTMTKK 419 NP++MMQN+Y AAFWTM KK Sbjct: 588 NPRSMMQNRYFAAFWTMRKK 607 >emb|CBI39364.3| unnamed protein product [Vitis vinifera] Length = 498 Score = 172 bits (436), Expect(2) = 9e-46 Identities = 84/97 (86%), Positives = 87/97 (89%), Gaps = 2/97 (2%) Frame = +1 Query: 1 VSFPDIHPASAGITEGFSMCGGDFVEVYSDSNQEGAWDAVVTCFFLDTAHNIVEYIEIIS 180 VS PD+HPASAGITEGFSMCGGDFVEVYSD +Q G WDAVVTCFF+DTAHNIVEYIEIIS Sbjct: 354 VSIPDMHPASAGITEGFSMCGGDFVEVYSDPSQIGVWDAVVTCFFIDTAHNIVEYIEIIS 413 Query: 181 RILKD--VWINLGPLLYHSADAYGTEDEMSIELSLED 285 RILKD VWIN GPLLYH AD YG EDEMSIELSLED Sbjct: 414 RILKDGGVWINFGPLLYHFADMYGQEDEMSIELSLED 450 Score = 37.4 bits (85), Expect(2) = 9e-46 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +3 Query: 360 NPQAMMQNQYNAAFWTMTKK 419 NP++MMQN+Y AAFWTM KK Sbjct: 475 NPRSMMQNRYFAAFWTMRKK 494