BLASTX nr result

ID: Coptis23_contig00003567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003567
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336390.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-47
ref|XP_002307920.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-46
ref|XP_003543999.1| PREDICTED: UPF0586 protein C9orf41 homolog [...   176   2e-46
ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852...   172   9e-46
emb|CBI39364.3| unnamed protein product [Vitis vinifera]              172   9e-46

>ref|XP_002336390.1| predicted protein [Populus trichocarpa] gi|222834882|gb|EEE73331.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  177 bits (450), Expect(2) = 2e-47
 Identities = 87/97 (89%), Positives = 89/97 (91%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   VSFPDIHPASAGITEGFSMCGGDFVEVYSDSNQEGAWDAVVTCFFLDTAHNIVEYIEIIS 180
           VSFPDIHPASAGITEGFSMCGGDFVEVYSD +Q G WDAVVTCFF+DTAHNIVEYIEIIS
Sbjct: 133 VSFPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGVWDAVVTCFFIDTAHNIVEYIEIIS 192

Query: 181 RILKD--VWINLGPLLYHSADAYGTEDEMSIELSLED 285
           RILKD  VWINLGPLLYH AD YG EDEMSIELSLED
Sbjct: 193 RILKDGGVWINLGPLLYHFADMYGQEDEMSIELSLED 229



 Score = 37.4 bits (85), Expect(2) = 2e-47
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 360 NPQAMMQNQYNAAFWTMTKK 419
           NP++MMQN+Y AAFWTM KK
Sbjct: 254 NPRSMMQNRYFAAFWTMRKK 273


>ref|XP_002307920.1| predicted protein [Populus trichocarpa] gi|222853896|gb|EEE91443.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  176 bits (445), Expect(2) = 1e-46
 Identities = 86/97 (88%), Positives = 88/97 (90%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   VSFPDIHPASAGITEGFSMCGGDFVEVYSDSNQEGAWDAVVTCFFLDTAHNIVEYIEIIS 180
           VS PDIHPASAGITEGFSMCGGDFVEVYSD +Q G WDAVVTCFF+DTAHNIVEYIEIIS
Sbjct: 141 VSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGVWDAVVTCFFIDTAHNIVEYIEIIS 200

Query: 181 RILKD--VWINLGPLLYHSADAYGTEDEMSIELSLED 285
           RILKD  VWINLGPLLYH AD YG EDEMSIELSLED
Sbjct: 201 RILKDGGVWINLGPLLYHFADVYGQEDEMSIELSLED 237



 Score = 36.6 bits (83), Expect(2) = 1e-46
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +3

Query: 360 NPQAMMQNQYNAAFWTMTKK 419
           NP+AMMQN+Y  AFWTM KK
Sbjct: 262 NPRAMMQNRYFPAFWTMRKK 281


>ref|XP_003543999.1| PREDICTED: UPF0586 protein C9orf41 homolog [Glycine max]
          Length = 456

 Score =  176 bits (446), Expect(2) = 2e-46
 Identities = 86/97 (88%), Positives = 90/97 (92%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   VSFPDIHPASAGITEGFSMCGGDFVEVYSDSNQEGAWDAVVTCFFLDTAHNIVEYIEIIS 180
           VS PDIHPASAGITEGFSMCGGDFVEVYSDS+Q GAWDAVVTCFF+DTAHNIVEYIEIIS
Sbjct: 307 VSIPDIHPASAGITEGFSMCGGDFVEVYSDSSQIGAWDAVVTCFFIDTAHNIVEYIEIIS 366

Query: 181 RILKD--VWINLGPLLYHSADAYGTEDEMSIELSLED 285
           +ILKD  VWINLGPLLYH AD YG +DEMSIELSLED
Sbjct: 367 KILKDGGVWINLGPLLYHFADMYGQDDEMSIELSLED 403



 Score = 35.8 bits (81), Expect(2) = 2e-46
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +3

Query: 357 ANPQAMMQNQYNAAFWTMTKK 419
           AN ++MMQN+Y AAFWTM KK
Sbjct: 427 ANSRSMMQNRYFAAFWTMRKK 447


>ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852521 [Vitis vinifera]
          Length = 611

 Score =  172 bits (436), Expect(2) = 9e-46
 Identities = 84/97 (86%), Positives = 87/97 (89%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   VSFPDIHPASAGITEGFSMCGGDFVEVYSDSNQEGAWDAVVTCFFLDTAHNIVEYIEIIS 180
           VS PD+HPASAGITEGFSMCGGDFVEVYSD +Q G WDAVVTCFF+DTAHNIVEYIEIIS
Sbjct: 467 VSIPDMHPASAGITEGFSMCGGDFVEVYSDPSQIGVWDAVVTCFFIDTAHNIVEYIEIIS 526

Query: 181 RILKD--VWINLGPLLYHSADAYGTEDEMSIELSLED 285
           RILKD  VWIN GPLLYH AD YG EDEMSIELSLED
Sbjct: 527 RILKDGGVWINFGPLLYHFADMYGQEDEMSIELSLED 563



 Score = 37.4 bits (85), Expect(2) = 9e-46
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 360 NPQAMMQNQYNAAFWTMTKK 419
           NP++MMQN+Y AAFWTM KK
Sbjct: 588 NPRSMMQNRYFAAFWTMRKK 607


>emb|CBI39364.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  172 bits (436), Expect(2) = 9e-46
 Identities = 84/97 (86%), Positives = 87/97 (89%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   VSFPDIHPASAGITEGFSMCGGDFVEVYSDSNQEGAWDAVVTCFFLDTAHNIVEYIEIIS 180
           VS PD+HPASAGITEGFSMCGGDFVEVYSD +Q G WDAVVTCFF+DTAHNIVEYIEIIS
Sbjct: 354 VSIPDMHPASAGITEGFSMCGGDFVEVYSDPSQIGVWDAVVTCFFIDTAHNIVEYIEIIS 413

Query: 181 RILKD--VWINLGPLLYHSADAYGTEDEMSIELSLED 285
           RILKD  VWIN GPLLYH AD YG EDEMSIELSLED
Sbjct: 414 RILKDGGVWINFGPLLYHFADMYGQEDEMSIELSLED 450



 Score = 37.4 bits (85), Expect(2) = 9e-46
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 360 NPQAMMQNQYNAAFWTMTKK 419
           NP++MMQN+Y AAFWTM KK
Sbjct: 475 NPRSMMQNRYFAAFWTMRKK 494


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