BLASTX nr result

ID: Coptis23_contig00003563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003563
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624207.1| Dehydrogenase/reductase SDR family member [M...   436   e-120
ref|XP_003552459.1| PREDICTED: dehydrogenase/reductase SDR famil...   426   e-117
ref|XP_002276273.1| PREDICTED: dehydrogenase/reductase SDR famil...   426   e-117
ref|XP_002328993.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117
gb|ACU19184.1| unknown [Glycine max]                                  424   e-116

>ref|XP_003624207.1| Dehydrogenase/reductase SDR family member [Medicago truncatula]
            gi|355499222|gb|AES80425.1| Dehydrogenase/reductase SDR
            family member [Medicago truncatula]
          Length = 318

 Score =  436 bits (1122), Expect = e-120
 Identities = 213/275 (77%), Positives = 244/275 (88%)
 Frame = -2

Query: 1105 VFWITGASRGIGKVLAEQLSGLGAKLIISARNQAELEGVKAKLVGKHASEVRILPMDLAS 926
            VFWITGASRGIG++LA+QL+ LGAKLI+SAR++A+L  VK++L GKHA E +ILP+DL S
Sbjct: 42   VFWITGASRGIGEILAQQLASLGAKLILSARDEADLNRVKSQLKGKHADEAKILPLDLTS 101

Query: 925  GEESLREAVQRAESFFPDAGVDYMIHNAAYERPKSSALDVTEESLKATFEVNVLGTITLT 746
            GE+SLR+ V  AES FPD+GVDYMIHNAAYERPKSS LDVTEESLKATF+VNV GTITLT
Sbjct: 102  GEDSLRKVVDEAESLFPDSGVDYMIHNAAYERPKSSVLDVTEESLKATFDVNVFGTITLT 161

Query: 745  RLLTPCMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELYQKGIKVTI 566
            RLLTP MLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSEL QKGI+VT+
Sbjct: 162  RLLTPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELCQKGIQVTV 221

Query: 565  VCPGPIETSKNVGANSSVLKRVSSERCAELTVVAASHGLKEAWISDQPVLIIMYLIQYMP 386
            VCPGPIET+ N G+     KRVS+E+C ELT++AA+HGLKEAWIS QPVL +MYL+QYMP
Sbjct: 222  VCPGPIETANNSGSQVPSEKRVSAEKCVELTIIAATHGLKEAWISYQPVLAVMYLVQYMP 281

Query: 385  SIGYWIMDKIGGNRVEAAAQKGNTYSWKLLFGYKK 281
            +IGYW+MDK+G NRVEAA +KGN YS  LLFG KK
Sbjct: 282  TIGYWLMDKVGKNRVEAAKEKGNAYSLSLLFGKKK 316


>ref|XP_003552459.1| PREDICTED: dehydrogenase/reductase SDR family member 7-like [Glycine
            max]
          Length = 319

 Score =  426 bits (1096), Expect = e-117
 Identities = 211/276 (76%), Positives = 244/276 (88%), Gaps = 1/276 (0%)
 Frame = -2

Query: 1105 VFWITGASRGIGKVLAEQLSGLGAKLIISARNQAELEGVKAKLVGKHA-SEVRILPMDLA 929
            V WITGASRGIG++LA+Q + LGAKLIISARN+AEL  V+ +L GKHA  +V+ILP+DL+
Sbjct: 42   VVWITGASRGIGEILAKQFASLGAKLIISARNEAELNRVRTQLKGKHAPDDVKILPLDLS 101

Query: 928  SGEESLREAVQRAESFFPDAGVDYMIHNAAYERPKSSALDVTEESLKATFEVNVLGTITL 749
            SGE+SLR AV++AESFFPD+GVDYM+HNAA+ERPK+S LDVTEE LKATF+VNVLGTITL
Sbjct: 102  SGEDSLRIAVEKAESFFPDSGVDYMVHNAAFERPKTSILDVTEEGLKATFDVNVLGTITL 161

Query: 748  TRLLTPCMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELYQKGIKVT 569
            T+LL P ML+RG GHFVVMSSAAGKTPAPGQAVYSASKYALNGYFH+LRSEL QKGI+VT
Sbjct: 162  TKLLAPFMLKRGHGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHTLRSELCQKGIQVT 221

Query: 568  IVCPGPIETSKNVGANSSVLKRVSSERCAELTVVAASHGLKEAWISDQPVLIIMYLIQYM 389
            +VCPGPIETS N G+     KRV SERCAELT++AA+HGLKEAWIS QPVL +MYL+QYM
Sbjct: 222  VVCPGPIETSNNAGSRVPSEKRVPSERCAELTIIAATHGLKEAWISYQPVLAVMYLVQYM 281

Query: 388  PSIGYWIMDKIGGNRVEAAAQKGNTYSWKLLFGYKK 281
            P+IGYW+MDKIG +RVEAA QKGNTYS  LL G KK
Sbjct: 282  PTIGYWVMDKIGKSRVEAAEQKGNTYSLSLLLGKKK 317


>ref|XP_002276273.1| PREDICTED: dehydrogenase/reductase SDR family member 7 [Vitis
            vinifera] gi|297735239|emb|CBI17601.3| unnamed protein
            product [Vitis vinifera]
          Length = 318

 Score =  426 bits (1095), Expect = e-117
 Identities = 214/276 (77%), Positives = 246/276 (89%), Gaps = 1/276 (0%)
 Frame = -2

Query: 1105 VFWITGASRGIGKVLAEQLSGLGAKLIISARNQAELEGVKAKLVGKHA-SEVRILPMDLA 929
            V WITGASRGIG+VLA+QL+GLGAKLI+SARN+ ELE VK +L GKHA  EV ILP+DLA
Sbjct: 43   VVWITGASRGIGEVLAKQLAGLGAKLILSARNEVELERVKQQLRGKHAPGEVEILPLDLA 102

Query: 928  SGEESLREAVQRAESFFPDAGVDYMIHNAAYERPKSSALDVTEESLKATFEVNVLGTITL 749
             GE+SLREAV++AESFF  AGVDYMIHNAAYERPK+SA+DVTEESLKAT  VNV+GTI+L
Sbjct: 103  GGEDSLREAVEKAESFFSGAGVDYMIHNAAYERPKASAVDVTEESLKATLNVNVIGTISL 162

Query: 748  TRLLTPCMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELYQKGIKVT 569
            T+LL P ML+RG+GHFVVMSSAAGKTPAPGQAVYSASKYALNGYFH+LRSEL QKGIKVT
Sbjct: 163  TQLLAPFMLKRGRGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHTLRSELCQKGIKVT 222

Query: 568  IVCPGPIETSKNVGANSSVLKRVSSERCAELTVVAASHGLKEAWISDQPVLIIMYLIQYM 389
            +VCPGPIETS   G+ +S  +RVSSERCAELT++AA+HGLKE WIS QPVL +MYL+QYM
Sbjct: 223  VVCPGPIETSN--GSKASTERRVSSERCAELTIIAATHGLKEVWISCQPVLAVMYLVQYM 280

Query: 388  PSIGYWIMDKIGGNRVEAAAQKGNTYSWKLLFGYKK 281
            P+IG+W+MDK+G NRVEAA QKG+TYS  LLFG KK
Sbjct: 281  PTIGFWLMDKVGANRVEAAKQKGSTYSLGLLFGKKK 316


>ref|XP_002328993.1| predicted protein [Populus trichocarpa] gi|222839227|gb|EEE77578.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  426 bits (1094), Expect = e-117
 Identities = 214/281 (76%), Positives = 245/281 (87%), Gaps = 6/281 (2%)
 Frame = -2

Query: 1105 VFWITGASRGIGKVLAEQLSGLGAKLIISARNQAELEGVKAKLVGKHA-SEVRILPMDLA 929
            V WITGASRGIG+VLA+QL+ LGAKLI+S+RN+AELE VK +L GKHA  EV+I+P+DLA
Sbjct: 42   VVWITGASRGIGEVLAKQLASLGAKLILSSRNEAELERVKNQLTGKHAPGEVKIIPLDLA 101

Query: 928  SGEESLREAVQRAESFFPDAGVDYMIHNAAYERPKSSALDVTEESLKATFEVNVLGTITL 749
            SGEE L+EAV++AESFF  AGVDYMIHNAAYERPKS+ALDV EESLKATF +NVLG I+L
Sbjct: 102  SGEEFLKEAVEKAESFFSGAGVDYMIHNAAYERPKSTALDVNEESLKATFNINVLGPISL 161

Query: 748  TRLLTPCMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELYQKGIKVT 569
            TRLL   ML RG+GHFVVMSSAAGKTP PGQA+YSASK+ALNGYFHSLRSEL QKGIKVT
Sbjct: 162  TRLLASSMLSRGRGHFVVMSSAAGKTPTPGQAIYSASKFALNGYFHSLRSELCQKGIKVT 221

Query: 568  IVCPGPIETSKNVGANSSVLK-----RVSSERCAELTVVAASHGLKEAWISDQPVLIIMY 404
            IVCPGPIETS   G+ +S  K     RVSSERCAELT++AA+HGLKE WISDQPVL ++Y
Sbjct: 222  IVCPGPIETSNGFGSTTSGKKGTFERRVSSERCAELTIIAATHGLKEVWISDQPVLAVLY 281

Query: 403  LIQYMPSIGYWIMDKIGGNRVEAAAQKGNTYSWKLLFGYKK 281
            L+QYMP++GYW+MDKIGGNR+ AAAQKGNTYS  LLFG KK
Sbjct: 282  LVQYMPTVGYWLMDKIGGNRLAAAAQKGNTYSLSLLFGKKK 322


>gb|ACU19184.1| unknown [Glycine max]
          Length = 319

 Score =  424 bits (1089), Expect = e-116
 Identities = 210/276 (76%), Positives = 243/276 (88%), Gaps = 1/276 (0%)
 Frame = -2

Query: 1105 VFWITGASRGIGKVLAEQLSGLGAKLIISARNQAELEGVKAKLVGKHA-SEVRILPMDLA 929
            V WITGASRGIG++LA+Q + LGAKLIISARN+AEL  V+ +L GKHA  +V+ILP+DL+
Sbjct: 42   VVWITGASRGIGEILAKQFASLGAKLIISARNEAELNRVRTQLKGKHAPDDVKILPLDLS 101

Query: 928  SGEESLREAVQRAESFFPDAGVDYMIHNAAYERPKSSALDVTEESLKATFEVNVLGTITL 749
            SGE+SL+ AV +AESFFPD+GVDYM+HNAA+ERPK+S LDVTEE LKATF+VNVLGTITL
Sbjct: 102  SGEDSLKIAVGKAESFFPDSGVDYMVHNAAFERPKTSILDVTEEGLKATFDVNVLGTITL 161

Query: 748  TRLLTPCMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELYQKGIKVT 569
            T+LL P ML+RG GHFVVMSSAAGKTPAPGQAVYSASKYALNGYFH+LRSEL QKGI+VT
Sbjct: 162  TKLLAPFMLKRGHGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHTLRSELCQKGIQVT 221

Query: 568  IVCPGPIETSKNVGANSSVLKRVSSERCAELTVVAASHGLKEAWISDQPVLIIMYLIQYM 389
            +VCPGPIETS N G+     KRV SERCAELT++AA+HGLKEAWIS QPVL +MYL+QYM
Sbjct: 222  VVCPGPIETSNNAGSRVPSEKRVPSERCAELTIIAATHGLKEAWISYQPVLAVMYLVQYM 281

Query: 388  PSIGYWIMDKIGGNRVEAAAQKGNTYSWKLLFGYKK 281
            P+IGYW+MDKIG +RVEAA QKGNTYS  LL G KK
Sbjct: 282  PTIGYWVMDKIGKSRVEAAEQKGNTYSLSLLLGKKK 317


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