BLASTX nr result

ID: Coptis23_contig00003559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003559
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267490.2| PREDICTED: probable ubiquitin-conjugating en...   108   5e-22
ref|XP_003604860.1| hypothetical protein MTR_4g020620 [Medicago ...   101   6e-20
ref|XP_003604859.1| hypothetical protein MTR_4g020620 [Medicago ...   101   6e-20
ref|XP_003543046.1| PREDICTED: probable ubiquitin-conjugating en...   100   2e-19
ref|XP_003593574.1| Ubiquitin-conjugating enzyme family protein ...   100   2e-19

>ref|XP_002267490.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Vitis
           vinifera] gi|297735992|emb|CBI23966.3| unnamed protein
           product [Vitis vinifera]
          Length = 944

 Score =  108 bits (270), Expect = 5e-22
 Identities = 46/76 (60%), Positives = 60/76 (78%)
 Frame = +2

Query: 2   WKENRVEGIVCHVEAGIVHVDWVACAMIDCGMSVATPPSQQDSENLSLLSCFAHANWQLG 181
           WKENR +G VC VEAG+V VDW+A A++  G+S+  PP  QDS+ L+LLSCF+HANWQLG
Sbjct: 188 WKENRTDGTVCAVEAGLVSVDWLASALVGSGLSLPAPPCWQDSKKLTLLSCFSHANWQLG 247

Query: 182 DWCILPNNDQSIVKEQ 229
           DWC+LP +D+  V E+
Sbjct: 248 DWCMLPVSDRKGVMEK 263


>ref|XP_003604860.1| hypothetical protein MTR_4g020620 [Medicago truncatula]
           gi|355505915|gb|AES87057.1| hypothetical protein
           MTR_4g020620 [Medicago truncatula]
          Length = 799

 Score =  101 bits (252), Expect = 6e-20
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = +2

Query: 2   WKENRVEGIVCHVEAGIVHVDWVACAMIDCGMSVATPPSQQDSENLSLLSCFAHANWQLG 181
           W++N  EG VC+VEAG+V+V+W+A   +    +V TPP  QDS+NL+LLSCF+HANWQLG
Sbjct: 167 WRDNHDEGTVCYVEAGLVYVNWLASVPLGSNSNVNTPPCWQDSKNLTLLSCFSHANWQLG 226

Query: 182 DWCILPNNDQSIVKEQ 229
           DWC+LP  DQ    EQ
Sbjct: 227 DWCMLPVADQKEQVEQ 242


>ref|XP_003604859.1| hypothetical protein MTR_4g020620 [Medicago truncatula]
           gi|355505914|gb|AES87056.1| hypothetical protein
           MTR_4g020620 [Medicago truncatula]
          Length = 922

 Score =  101 bits (252), Expect = 6e-20
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = +2

Query: 2   WKENRVEGIVCHVEAGIVHVDWVACAMIDCGMSVATPPSQQDSENLSLLSCFAHANWQLG 181
           W++N  EG VC+VEAG+V+V+W+A   +    +V TPP  QDS+NL+LLSCF+HANWQLG
Sbjct: 167 WRDNHDEGTVCYVEAGLVYVNWLASVPLGSNSNVNTPPCWQDSKNLTLLSCFSHANWQLG 226

Query: 182 DWCILPNNDQSIVKEQ 229
           DWC+LP  DQ    EQ
Sbjct: 227 DWCMLPVADQKEQVEQ 242


>ref|XP_003543046.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like
           [Glycine max]
          Length = 919

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = +2

Query: 2   WKENRVEGIVCHVEAGIVHVDWVACAMIDCGMSVATPPSQQDSENLSLLSCFAHANWQLG 181
           WK+N  EG VC VEAG+V+V+W+A  ++    +V+ PP  QDS+NL+LLSCF+H NWQLG
Sbjct: 188 WKDNHDEGTVCAVEAGLVYVNWLASVLLGSNFNVSVPPCWQDSKNLTLLSCFSHTNWQLG 247

Query: 182 DWCILPNNDQSIVKEQ 229
           DWC+LP  DQ   KEQ
Sbjct: 248 DWCMLPVVDQ---KEQ 260


>ref|XP_003593574.1| Ubiquitin-conjugating enzyme family protein [Medicago truncatula]
           gi|355482622|gb|AES63825.1| Ubiquitin-conjugating enzyme
           family protein [Medicago truncatula]
          Length = 954

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 44/76 (57%), Positives = 55/76 (72%)
 Frame = +2

Query: 2   WKENRVEGIVCHVEAGIVHVDWVACAMIDCGMSVATPPSQQDSENLSLLSCFAHANWQLG 181
           W++N  EG VC VEAG+V+V+W+A   +    +V TPP  QDS+NL+LLSCF HANWQLG
Sbjct: 184 WRDNHDEGTVCSVEAGLVYVNWLASVPLGSNSNVNTPPCWQDSKNLTLLSCFPHANWQLG 243

Query: 182 DWCILPNNDQSIVKEQ 229
           DWC+LP  DQ    EQ
Sbjct: 244 DWCMLPVADQKEQVEQ 259


Top