BLASTX nr result

ID: Coptis23_contig00003556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003556
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis...   187   2e-91
gb|AEA92307.1| Rab3 [Hevea brasiliensis]                              188   1e-90
gb|AEA92304.1| Rab2 [Hevea brasiliensis]                              188   1e-90
ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [...   188   2e-90
gb|ADL59582.1| Rab1 [Hevea brasiliensis]                              188   2e-90

>ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
            gi|296086273|emb|CBI31714.3| unnamed protein product
            [Vitis vinifera]
          Length = 216

 Score =  187 bits (476), Expect(2) = 2e-91
 Identities = 97/115 (84%), Positives = 98/115 (85%)
 Frame = -2

Query: 1145 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXFKIRTIELDGKRIKLQIWDTAGQ 966
            LIKLLLIGDSGVGKSCLLLR                 FKIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15   LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 965  ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 801
            ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK+LVGNK
Sbjct: 75   ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNK 129



 Score =  176 bits (446), Expect(2) = 2e-91
 Identities = 86/94 (91%), Positives = 92/94 (97%)
 Frame = -3

Query: 745 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 566
           K+LVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA+DIKQRLA
Sbjct: 123 KVLVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLA 182

Query: 565 ETDSRAEPQTIKISQPDQASGSGQAPQKSACCGT 464
           ETDS+AEPQTIKI+QPDQA+  GQAPQKSACCG+
Sbjct: 183 ETDSKAEPQTIKINQPDQAANGGQAPQKSACCGS 216


>gb|AEA92307.1| Rab3 [Hevea brasiliensis]
          Length = 216

 Score =  188 bits (477), Expect(2) = 1e-90
 Identities = 98/115 (85%), Positives = 98/115 (85%)
 Frame = -2

Query: 1145 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXFKIRTIELDGKRIKLQIWDTAGQ 966
            LIKLLLIGDSGVGKSCLLLR                 FKIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15   LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 965  ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 801
            ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK
Sbjct: 75   ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129



 Score =  173 bits (438), Expect(2) = 1e-90
 Identities = 86/94 (91%), Positives = 91/94 (96%)
 Frame = -3

Query: 745 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 566
           KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK+RLA
Sbjct: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKKRLA 182

Query: 565 ETDSRAEPQTIKISQPDQASGSGQAPQKSACCGT 464
           ETDS+AEPQTIKI+QPDQA+  GQA QKSACCG+
Sbjct: 183 ETDSKAEPQTIKINQPDQAASGGQAAQKSACCGS 216


>gb|AEA92304.1| Rab2 [Hevea brasiliensis]
          Length = 216

 Score =  188 bits (477), Expect(2) = 1e-90
 Identities = 98/115 (85%), Positives = 98/115 (85%)
 Frame = -2

Query: 1145 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXFKIRTIELDGKRIKLQIWDTAGQ 966
            LIKLLLIGDSGVGKSCLLLR                 FKIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15   LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 965  ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 801
            ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK
Sbjct: 75   ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129



 Score =  173 bits (438), Expect(2) = 1e-90
 Identities = 86/94 (91%), Positives = 91/94 (96%)
 Frame = -3

Query: 745 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 566
           KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA
Sbjct: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182

Query: 565 ETDSRAEPQTIKISQPDQASGSGQAPQKSACCGT 464
           +TDS+AEP TIKI+QPDQA G+GQA QKSACCG+
Sbjct: 183 DTDSKAEPTTIKINQPDQAGGAGQAGQKSACCGS 216


>ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
            gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related
            protein RABE1c-like [Cucumis sativus]
          Length = 216

 Score =  188 bits (477), Expect(2) = 2e-90
 Identities = 98/115 (85%), Positives = 98/115 (85%)
 Frame = -2

Query: 1145 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXFKIRTIELDGKRIKLQIWDTAGQ 966
            LIKLLLIGDSGVGKSCLLLR                 FKIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15   LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 965  ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 801
            ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK
Sbjct: 75   ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129



 Score =  172 bits (435), Expect(2) = 2e-90
 Identities = 85/94 (90%), Positives = 91/94 (96%)
 Frame = -3

Query: 745 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 566
           KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA
Sbjct: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182

Query: 565 ETDSRAEPQTIKISQPDQASGSGQAPQKSACCGT 464
           +TDS+AEPQTIKI++PD A+G GQA QKSACCG+
Sbjct: 183 DTDSKAEPQTIKINKPDAAAGDGQAAQKSACCGS 216


>gb|ADL59582.1| Rab1 [Hevea brasiliensis]
          Length = 216

 Score =  188 bits (477), Expect(2) = 2e-90
 Identities = 98/115 (85%), Positives = 98/115 (85%)
 Frame = -2

Query: 1145 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXFKIRTIELDGKRIKLQIWDTAGQ 966
            LIKLLLIGDSGVGKSCLLLR                 FKIRTIELDGKRIKLQIWDTAGQ
Sbjct: 15   LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74

Query: 965  ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 801
            ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK
Sbjct: 75   ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNK 129



 Score =  172 bits (435), Expect(2) = 2e-90
 Identities = 85/94 (90%), Positives = 91/94 (96%)
 Frame = -3

Query: 745 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 566
           KILVGNKADMDESKRAVPTSKGQALAD+YGIKFFETSAKTNLNVEEVFFSIARDIKQRLA
Sbjct: 123 KILVGNKADMDESKRAVPTSKGQALADKYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182

Query: 565 ETDSRAEPQTIKISQPDQASGSGQAPQKSACCGT 464
           +TDS+AEPQTIKI+QPDQA G+ QA QKSACCG+
Sbjct: 183 DTDSKAEPQTIKINQPDQAGGANQAAQKSACCGS 216


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