BLASTX nr result

ID: Coptis23_contig00003555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003555
         (4452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65752.1| hypothetical protein VITISV_026339 [Vitis vinifera]   823   0.0  
ref|XP_002283071.1| PREDICTED: uncharacterized protein LOC100248...   643   0.0  
ref|XP_002330738.1| predicted protein [Populus trichocarpa] gi|2...   627   e-176
ref|XP_002524275.1| DNA binding protein, putative [Ricinus commu...   607   e-171
emb|CBI20204.3| unnamed protein product [Vitis vinifera]              597   e-167

>emb|CAN65752.1| hypothetical protein VITISV_026339 [Vitis vinifera]
          Length = 1380

 Score =  823 bits (2125), Expect = 0.0
 Identities = 540/1487 (36%), Positives = 763/1487 (51%), Gaps = 42/1487 (2%)
 Frame = -3

Query: 4342 MLFGDKIEGLHDDGFEGSIAERRIFEEIFYGNDAGSNKKRCL-----DFGRKDNKHAXXX 4178
            ML   +IE LHDD FEGS  E RIF E+F+ N+  S  KR L     +F  +DNK     
Sbjct: 1    MLLSKEIEDLHDDDFEGSNDECRIFREVFFRNNTDSASKRFLVTGFINFECEDNKQTDTS 60

Query: 4177 XXXXXXXXVKGSRLEDSCRVDNGYLNGKKNEEGESREIVNSGFAREDSYCGPRNFSGVSC 3998
                       S+          Y+    N   +SR         E       N   V+ 
Sbjct: 61   LCSNSENSAVTSQSSKDL-----YMGDSCNVPEDSRGTSGPVSFSERFTLVEGNDHXVNV 115

Query: 3997 KHIKFSVVERSVPVDEKLSDCLPNEKKNLYQLSFFDKVAP------GMLRLDSSNGDRVM 3836
            K +K S        D++L +  P+ +K      FFD  AP      GM    S +  + +
Sbjct: 116  KRMKLS--------DDELCNLKPDFEK------FFDSSAPLKEIVSGMSPPASESVYKKV 161

Query: 3835 RCNLVESSSQCIVSSFYLPEQHMKVGSGSQTVVKASKSERLEFLRTDGEEATECI---PI 3665
            RC+LVESS Q +    YL ++H+++        + +   RL  L  DG +  E +    I
Sbjct: 162  RCHLVESSDQGVKYRCYLLKRHLQMERACSFSDRDAMKCRLSSL--DGSDRKEVVVSKAI 219

Query: 3664 ASPISHKGIVSKLLVDD--ACAAHCSGAIKGDNGSSEDSVILNTDILDMTYRPNCIEDQR 3491
            ASP+S +   +KLLV       A  SG         + SV L  D L  +     ++D R
Sbjct: 220  ASPVSQESFATKLLVASPPVAVADKSGPPLFSEDRPKKSVFLELDALYASPSVESLKDPR 279

Query: 3490 KRLRFHLNQLFISMGWSLDKRKRKNRNYQENVYISPKGKAFYELHKAWRSCGESLFSRKS 3311
              L  H+N + I+ GWS++KRKR +R ++E+VY SP+G+   E  KAWR CGE+LF+ + 
Sbjct: 280  PLLHDHINHVLIAAGWSIEKRKRNSRPHEESVYRSPEGRPIREFPKAWRLCGENLFADRY 339

Query: 3310 NSLNKESGKQWSTIDELWLDISETLAYMEREMQHVEASLALARQWTLLDPFVTLILIDRK 3131
            + + +   K+W+ I + W ++S  L Y+++++   E ++ LA +W+LLDPF+T++ ID+K
Sbjct: 340  SLVQENDAKEWTDISQFWSNLSNVLTYIDKKINEAETAITLAHRWSLLDPFITVVFIDKK 399

Query: 3130 LSSLRDGKPVKAVPTSLFDLRMRKDVLAAXXXXXXXXXXXXXXKDRTPSSVMGNTLFQAG 2951
            + +LR G  V A  + + + + + + +                    P+++  ++L    
Sbjct: 400  IGALRKGNAVTAKRSIVVEKKQKNNAVLVMKDVGCIKNQFARRD--LPAAISDSSLASGS 457

Query: 2950 --TRVHGT-RFARKIAEKEADCNRRVCSKYHKNGSSPIFDNKRQGRLFKALQGVSIGLRE 2780
              T   GT   A +  E+  D            G    FD   Q    + L+GVSI + +
Sbjct: 458  ALTVFEGTYHMADEKGEQFGD------------GRPLKFDQHAQKGAVRTLKGVSIYMAD 505

Query: 2779 ERSVSVDTESDDAIGEQCPGTSRSQIRTSYHGSLEGCQPSVSFPQEDTYLHDVPVAYESE 2600
            E+               C  + +                          L+DVP+   SE
Sbjct: 506  EKD------------GMCIQSGKG-------------------------LYDVPIT--SE 526

Query: 2599 DIDVEGTVNVFPRQDSSITIPNVGGQKSRCIKQSSIKLIQDMSVNDCEESGERFGAIIEW 2420
            ++DV  +  V P QDS++  P+   Q S    + S+ +++  S +  +E  E    ++  
Sbjct: 527  NVDVMRSETVSPHQDSNMNSPSCDKQISDHNMELSVDIVKAASNDIWDEKDEWLEGLVTD 586

Query: 2419 EGNQRPYDS----------DSTSSDLNYSAGHSRNLVTTSRYGEVITTKSRYFQLEGPLQ 2270
            +       S          +  +  + + +GH RN    +     + T   Y   +  L+
Sbjct: 587  KVGSHLLQSLEDVPNCTIKNGLAQGVLHPSGHIRNEGGRAVEASELKTDGTYLSADAILK 646

Query: 2269 NVTLARDSADVAKVSNIEMEQKIAAFRNFQXXXXXXXXXXXXXXXXXKLYSEPGKLDLSV 2090
                 +      K+S I++      +RN                    L S     ++  
Sbjct: 647  KKMRRKSK----KISEIKLS---TLYRN--------------EILGLPLPSRAELQNIHE 685

Query: 2089 PDTIESGNCQDVKIGRRSKKGHKCCEDDTINGQTCEKXXXXXXXXXXXXXXSKCKKFQHE 1910
             D        +  +   ++    C    +++   C+                K KKF H 
Sbjct: 686  HDPELESEEMEESLMAIARNNGGCKRSSSLSSSQCQSERKRS----------KFKKFHHX 735

Query: 1909 GSNNDELVSISSNGNIYVKSSFCNAAAEVPLHVNNECLDPRTFRKMTKSRKPNFNNGKKR 1730
              ++  LV +  +G+   + +  N      LHVN                KP    G  +
Sbjct: 736  VDSSGGLVQVVHDGDFSEEFNIENNTXNESLHVNI-------------GSKPETKYGNGQ 782

Query: 1729 KRFPGREIEDDDLLIAAFVVNKKFSSPSKQSTHKAGKKKG-VKRRHKSRKGSCKLLPRSP 1553
            +     +IEDDDLLIAA + N+  SS +K+ + K   KK     + K RKG+CKLLPRS 
Sbjct: 783  RNSSSCQIEDDDLLIAAIIQNRNASSSTKRPSSKMKVKKSKAPNKLKKRKGNCKLLPRSV 842

Query: 1552 GLIGKQYTDGKWSSSGARTVLSWLVDVGVVYVNEVLQYRSPKDDAVVKDGWVTKDGILCK 1373
            G  G+  TDGKW+SSG RTVLSWL+D GV+  N+V+QYR+ KD+AVVKDG+VT+DGI+CK
Sbjct: 843  GKGGRHATDGKWTSSGVRTVLSWLIDAGVISSNDVIQYRNLKDNAVVKDGYVTRDGIVCK 902

Query: 1372 CCNKLLSVSEFKVHAGFKLYRPCSNLFMESGRSITLCQLQAWSAEYKARRNGRQELEAGE 1193
            CC +L SV  FK+HAGFKL RPC NLFMESG+S TLCQLQAWS EYK R+ G + ++  E
Sbjct: 903  CCTELFSVCNFKIHAGFKLNRPCRNLFMESGKSFTLCQLQAWSTEYKVRKGGIKNVQIDE 962

Query: 1192 ADENDDTCGMCGDGGELICCDNCPSTFHQTCLSDKELPEGNWYCPSCTCQICRDVVREKK 1013
             D+NDD+CG+CGDGGELICCDNCPSTFHQ CLS KELPEGNWYCP+CTC+IC D+V++++
Sbjct: 963  IDQNDDSCGLCGDGGELICCDNCPSTFHQACLSAKELPEGNWYCPNCTCRICGDLVKDRE 1022

Query: 1012 DSSTAILLKCSQCDDKYHNACFTKGGCCKEV-SDTWFCGESCQEVYSGLQSRVGISNLIA 836
             SS+ + LKCSQC+ KYH  C  K  C KEV  D  FCGE+CQE+YSGLQ  +G  N IA
Sbjct: 1023 ASSSFLALKCSQCEHKYHMPCL-KEKCVKEVGGDARFCGENCQEIYSGLQGLLGFVNHIA 1081

Query: 835  DGFSWVLLRCNHGDPKVHSAQRFALTADCNSKLAVALTIMEECFLPMVDPRTGINMIPQA 656
            DGF+W LLRC H D KVHS+Q+ AL A+CNSKLAVALTIMEECFL MVDPRTGI+MIP  
Sbjct: 1082 DGFTWTLLRCIHDDQKVHSSQKLALKAECNSKLAVALTIMEECFLSMVDPRTGIDMIPHV 1141

Query: 655  LYNWGSAFARLNFQGFYTAVLEKGDELISVATIRVHGVTVAEMPLVATRSENRRQGMCRR 476
            LYN GS FARLNF GFYT VLEK D L+SVA+IRVHGVTVAEMPL+AT  + R +GMCR 
Sbjct: 1142 LYNRGSDFARLNFNGFYTVVLEKDDALVSVASIRVHGVTVAEMPLIATYEKFRSKGMCRL 1201

Query: 475  LINAIEEMLISCKVEKLVVSAIPSLVDTWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 296
            L+NAIE+ML S KVEK+VV+AIPSLV+TWT                              
Sbjct: 1202 LMNAIEKMLKSVKVEKIVVAAIPSLVETWTLGFGFKPVEDDEKASLKKINLMVFPGTILL 1261

Query: 295  XXXXXKKEVMDIKAGPSNGL------LSGLDISEEYGLRKAILKESALQSSKNCRFVEVG 134
                 + +  D +AG    L      L+ LD S    +++ ++ ESA  S+ NC  VE G
Sbjct: 1262 KKSLYENQETDKQAGTDCALPLEAAKLTKLDAS----IKEELVIESAXLSNANC-CVEGG 1316

Query: 133  SE-PASVLEFKKLQMGEE----QGSLVHRCLEKPQSPDCLSTLEVRE 8
            +E      + + LQ+GE       ++V   LE   + +  S  +VR+
Sbjct: 1317 AEMEIGCPDSQNLQVGESYEELASTIVDSQLELAPNVESESVYDVRQ 1363


>ref|XP_002283071.1| PREDICTED: uncharacterized protein LOC100248637 [Vitis vinifera]
          Length = 1444

 Score =  643 bits (1659), Expect = 0.0
 Identities = 345/655 (52%), Positives = 431/655 (65%), Gaps = 13/655 (1%)
 Frame = -3

Query: 1933 KCKKFQHEGSNNDELVSISSNGNIYVKSSFCNAAAEVPLHVNNECLDPRTFRKMTKSRKP 1754
            K KKF H   ++  LV +  +G+   + +  N      LHVN                KP
Sbjct: 792  KFKKFHHSVDSSGGLVQVVHDGDFSEEFNIENNTNNESLHVNI-------------GSKP 838

Query: 1753 NFNNGKKRKRFPGREIEDDDLLIAAFVVNKKFSSPSKQSTHKAGKKKG-VKRRHKSRKGS 1577
                G  ++     +IEDDDLLIAA + N+  SS +K+ + K   KK     + K RKG+
Sbjct: 839  ETKYGNGQRNSSSCQIEDDDLLIAAIIQNRNASSSTKRPSSKMKVKKSKAPNKLKKRKGN 898

Query: 1576 CKLLPRSPGLIGKQYTDGKWSSSGARTVLSWLVDVGVVYVNEVLQYRSPKDDAVVKDGWV 1397
            CKLLPRS G  G+Q TDGKW+SSG RTVLSWL+D GV+  N+V+QYR+ KD+AVVKDG+V
Sbjct: 899  CKLLPRSVGKGGRQATDGKWTSSGVRTVLSWLIDAGVISSNDVIQYRNLKDNAVVKDGYV 958

Query: 1396 TKDGILCKCCNKLLSVSEFKVHAGFKLYRPCSNLFMESGRSITLCQLQAWSAEYKARRNG 1217
            T+DGI+CKCC +L SV  FK+HAGFKL RPC NLFMESG+S TLCQLQAWS EYK R+ G
Sbjct: 959  TRDGIVCKCCTELFSVCNFKIHAGFKLNRPCRNLFMESGKSFTLCQLQAWSTEYKVRKGG 1018

Query: 1216 RQELEAGEADENDDTCGMCGDGGELICCDNCPSTFHQTCLSDKELPEGNWYCPSCTCQIC 1037
             + ++  E D+NDD+CG+CGDGGELICCDNCPSTFHQ CLS KELPEGNWYCP+CTC+IC
Sbjct: 1019 IKNVQIDEIDQNDDSCGLCGDGGELICCDNCPSTFHQACLSAKELPEGNWYCPNCTCRIC 1078

Query: 1036 RDVVREKKDSSTAILLKCSQCDDKYHNACFTKGGCCKEV-SDTWFCGESCQEVYSGLQSR 860
             D+V++++ SS+ + LKCSQC+ KYH  C  K  C KEV  D  FCGE+CQE+YSGLQ  
Sbjct: 1079 GDLVKDREASSSFLALKCSQCEHKYHMPCL-KEKCVKEVGGDARFCGENCQEIYSGLQGL 1137

Query: 859  VGISNLIADGFSWVLLRCNHGDPKVHSAQRFALTADCNSKLAVALTIMEECFLPMVDPRT 680
            +G  N IADGF+W LLRC H D KVHS+Q+ AL A+CNSKLAVALTIMEECFL MVDPRT
Sbjct: 1138 LGFVNHIADGFTWTLLRCIHDDQKVHSSQKLALKAECNSKLAVALTIMEECFLSMVDPRT 1197

Query: 679  GINMIPQALYNWGSAFARLNFQGFYTAVLEKGDELISVATIRVHGVTVAEMPLVATRSEN 500
            GI+MIP  LYN GS FARLNF GFYT VLEK D L+SVA+IRVHGVTVAEMPL+AT  + 
Sbjct: 1198 GIDMIPHVLYNRGSDFARLNFNGFYTVVLEKDDALVSVASIRVHGVTVAEMPLIATYEKF 1257

Query: 499  RRQGMCRRLINAIEEMLISCKVEKLVVSAIPSLVDTWTXXXXXXXXXXXXXXXXXXXXXX 320
            R +GMCR L+NAIE+ML S KVEK+VV+AIPSLV+TWT                      
Sbjct: 1258 RSKGMCRLLMNAIEKMLKSVKVEKIVVAAIPSLVETWTLGFGFKPVEDDEKASLKKINLM 1317

Query: 319  XXXXXXXXXXXXXKKEVMDIKAGPSNGL------LSGLDISEEYGLRKAILKESALQSSK 158
                         + +  D +AG    L      L+ LD S    +++ ++ ESA  S+ 
Sbjct: 1318 VFPGTILLKKSLYENQETDKQAGTDCALPLEAAKLTKLDAS----IKEELVIESAQLSNA 1373

Query: 157  NCRFVEVGSE-PASVLEFKKLQMGEE----QGSLVHRCLEKPQSPDCLSTLEVRE 8
            NC  VE G+E      + + LQ+GE       ++V   LE   + +  S  +VR+
Sbjct: 1374 NC-CVEGGAEMEIGCPDSQNLQVGESYEELASTIVDSQLELAPNVESESVYDVRQ 1427



 Score =  225 bits (573), Expect = 1e-55
 Identities = 182/650 (28%), Positives = 301/650 (46%), Gaps = 17/650 (2%)
 Frame = -3

Query: 4342 MLFGDKIEGLHDDGFEGSIAERRIFEEIFYGNDAGSNKKRCL-----DFGRKDNKHAXXX 4178
            ML   +IE LHDD FEGS  E RIF E+F+ N+  S  KR L     +F  +DNK     
Sbjct: 1    MLLSKEIEDLHDDDFEGSNDECRIFREVFFRNNTDSASKRFLVTGFINFECEDNKQTDTS 60

Query: 4177 XXXXXXXXVKGSRLEDSCRVDNGYLNGKKNEEGESREIVNSGFAREDSYCGPRNFSGVSC 3998
                       S+          Y+    N   +SR         E       N   V+ 
Sbjct: 61   LCSNSENSAVTSQSSKDL-----YMGDSCNVPEDSRGTSGPVSFSERFTLVEGNDHDVNV 115

Query: 3997 KHIKFSVVERSVPVDEKLSDCLPNEKKNLYQLSFFDKVAP------GMLRLDSSNGDRVM 3836
            K +K S        D++L +  P+ +K      FFD  AP      GM    S +  + +
Sbjct: 116  KRMKLS--------DDELCNLKPDFEK------FFDSSAPLKEIVSGMSPPASESVYKKV 161

Query: 3835 RCNLVESSSQCIVSSFYLPEQHMKVGSGSQTVVKASKSERLEFLRTDGEEATECI---PI 3665
            RC+LVESS Q +    YL ++H+++        + +   RL  L  DG +  E +    I
Sbjct: 162  RCHLVESSDQGVKYRCYLLKRHLQMERACSFSDRDAMKCRLSSL--DGSDRKEVVVSKAI 219

Query: 3664 ASPISHKGIVSKLLVDD--ACAAHCSGAIKGDNGSSEDSVILNTDILDMTYRPNCIEDQR 3491
            ASP+S +   +KLLV       A  SG         + SV L  D L  +     ++D R
Sbjct: 220  ASPVSQESFATKLLVASPPVAVADKSGPPLFSEDRPKKSVFLELDALYASPSVESLKDPR 279

Query: 3490 KRLRFHLNQLFISMGWSLDKRKRKNRNYQENVYISPKGKAFYELHKAWRSCGESLFSRKS 3311
              L  H+N + I+ GWS++KRKR +R ++E+VY SP+G+   E  KAWR CGE+LF+ + 
Sbjct: 280  PLLHDHINHVLIAAGWSIEKRKRNSRPHEESVYRSPEGRPIREFPKAWRLCGENLFADRY 339

Query: 3310 NSLNKESGKQWSTIDELWLDISETLAYMEREMQHVEASLALARQWTLLDPFVTLILIDRK 3131
            + + +   K+W+ I + W ++S  L Y+++++   E ++ LA +W+LLDPF+T++ ID+K
Sbjct: 340  SLVQENDAKEWTDISQFWSNLSNVLTYIDKKINEAETAITLAHRWSLLDPFITVVFIDKK 399

Query: 3130 LSSLRDGKPVKAVPTSLFDLRMRKDVLAAXXXXXXXXXXXXXXKDRTPSSVMGNTLFQAG 2951
            + +LR G  V A  + + + + + +   A                R   + + ++   +G
Sbjct: 400  IGALRKGNAVTAKRSIVVEKKQKNN---AVLVMKDVGCIKNQFARRDLPAAISDSSLASG 456

Query: 2950 TRVHGTRFARKIAEKEADCNRRVCSKYHKNGSSPIFDNKRQGRLFKALQGVSIGLREER- 2774
            + +        +A+++ +           +G    F    Q    + L+GVSI + +E+ 
Sbjct: 457  SALTVFEGTYHMADEKGE--------QFGDGRPLKFGQHAQKGAVRTLKGVSIYMADEKG 508

Query: 2773 SVSVDTESDDAIGEQCPGTSRSQIRTSYHGSLEGCQPSVSFPQEDTYLHDVPVAYESEDI 2594
            + S+DT   DA+  Q  G    +  +    SL+ C       Q    L+DVP+   SE++
Sbjct: 509  TCSIDTV--DAMANQGGGMLEKKRSSLDPSSLQACVSDGMCIQSGKGLYDVPIT--SENV 564

Query: 2593 DVEGTVNVFPRQDSSITIPNVGGQKSRCIKQSSIKLIQDMSVNDCEESGE 2444
            DV  +  V P QDS++  P+   Q      + S+ +++  S +  +E  E
Sbjct: 565  DVMRSETVSPHQDSNMNSPSCDKQILDHNMELSVDIVKAASNDMWDEKDE 614


>ref|XP_002330738.1| predicted protein [Populus trichocarpa] gi|222872514|gb|EEF09645.1|
            predicted protein [Populus trichocarpa]
          Length = 727

 Score =  627 bits (1616), Expect = e-176
 Identities = 308/469 (65%), Positives = 364/469 (77%), Gaps = 5/469 (1%)
 Frame = -3

Query: 1777 KMTKSRKPNFNNGKKRKRFPGREIEDDDLLIAAFVVNKKFSSPSKQSTHKAGKKKGVKR- 1601
            K+  +   ++    K+K+  G +I+DDDLLIAA + NK FS  + +S  K  KK  + R 
Sbjct: 19   KLKSTHGNSYGPKYKQKKTTGCQIDDDDLLIAAIIKNKDFSPGATRSISK--KKSCILRA 76

Query: 1600 --RHKSRKGSCKLLPRSPGLIGKQYTDGKWSSSGARTVLSWLVDVGVVYVNEVLQYRSPK 1427
              + K +KG C+LLPR+ G +GK Y  GKWS  G+RTVLSWL+D GV+ V +V+QYR+ K
Sbjct: 77   GSKRKRKKGGCRLLPRNLGKLGKHYVGGKWSRMGSRTVLSWLIDAGVLSVKDVVQYRNLK 136

Query: 1426 DDAVVKDGWVTKDGILCKCCNKLLSVSEFKVHAGFKLYRPCSNLFMESGRSITLCQLQAW 1247
            DD V+KDG VTKDGI+CKCCN +LSV++FK HAGFKL RPCSNLFMESG+  TLCQLQAW
Sbjct: 137  DDFVIKDGVVTKDGIMCKCCNMVLSVTKFKSHAGFKLNRPCSNLFMESGKPFTLCQLQAW 196

Query: 1246 SAEYKARRNGRQELEAGEADENDDTCGMCGDGGELICCDNCPSTFHQTCLSDKELPEGNW 1067
            SAEYK+R++G Q + A E D+NDD+CG+CGDGGELICCDNCPSTFHQ CL  ++LPEG+W
Sbjct: 197  SAEYKSRKSGTQVVRADEDDKNDDSCGLCGDGGELICCDNCPSTFHQACLCTEDLPEGSW 256

Query: 1066 YCPSCTCQICRDVVREKKDSSTAILLKCSQCDDKYHNACFTKGGCCKE--VSDTWFCGES 893
            YCP+CTC IC D+V +K+ SS+    KC QC+ KYH AC  +G    E  VSD WFC  S
Sbjct: 257  YCPNCTCWICGDLVNDKEASSSVGAYKCLQCEHKYHGAC-QQGKQTHEGLVSDAWFCSGS 315

Query: 892  CQEVYSGLQSRVGISNLIADGFSWVLLRCNHGDPKVHSAQRFALTADCNSKLAVALTIME 713
            CQEVYSGL SRVGI+N IADGF W LLRC H D KV SAQR AL A+CNSKLAVALTIME
Sbjct: 316  CQEVYSGLHSRVGINNPIADGFCWTLLRCIHEDQKVLSAQRLALKAECNSKLAVALTIME 375

Query: 712  ECFLPMVDPRTGINMIPQALYNWGSAFARLNFQGFYTAVLEKGDELISVATIRVHGVTVA 533
            ECF  MVDPRTGI+MIP ALYNWGS FARLNF GFYT VLEK D L+S A++RVHGVTVA
Sbjct: 376  ECFQSMVDPRTGIDMIPHALYNWGSDFARLNFFGFYTVVLEKDDVLVSAASVRVHGVTVA 435

Query: 532  EMPLVATRSENRRQGMCRRLINAIEEMLISCKVEKLVVSAIPSLVDTWT 386
            EMPL+AT S  RRQGMCR L+ AIEEMLIS KVEKLV+SAIP LV+TWT
Sbjct: 436  EMPLIATCSNYRRQGMCRHLMTAIEEMLISYKVEKLVISAIPDLVETWT 484


>ref|XP_002524275.1| DNA binding protein, putative [Ricinus communis]
            gi|223536466|gb|EEF38114.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1336

 Score =  607 bits (1566), Expect = e-171
 Identities = 304/495 (61%), Positives = 368/495 (74%), Gaps = 9/495 (1%)
 Frame = -3

Query: 1843 CNAAAEVPLHVNNECLDPRTFRKMTKSRKPNFN-NGKKRKRFPGR-EIEDDDLLIAAFVV 1670
            CN +  +  H++      +  RK +K +K + N +G K KR   R  I DDDLL++A + 
Sbjct: 647  CNKSTSMDSHLH------QVDRKGSKLKKMHHNFDGCKGKRKRTRCLIHDDDLLVSAIIK 700

Query: 1669 NKKFSSPSKQSTHKAGK-KKGVKRRHKSRKGSCKLLPRSPGLIGKQYTDGKWSSSGARTV 1493
            NK F S   +ST+K    K   K R KS+KGSC+LL R+   +GK   DGKWS  G RTV
Sbjct: 701  NKDFISNGPKSTYKKKAFKSRAKTRTKSQKGSCRLLLRNLSKVGKHCNDGKWSIMGPRTV 760

Query: 1492 LSWLVDVGVVYVNEVLQYRSPKDDAVVKDGWVTKDGILCKCCNKLLSVSEFKVHAGFKLY 1313
            LSWL+D+  + +N+V+QYR+P DD V+KDG + K+GI+CKCCN +LSV+ FK HAGFK  
Sbjct: 761  LSWLIDIEAISLNDVIQYRNPTDDTVIKDGLIKKEGIMCKCCNMVLSVTNFKNHAGFKQS 820

Query: 1312 RPCSNLFMESGRSITLCQLQAWSAEYKARRNGR-QELEAGEADENDDTCGMCGDGGELIC 1136
            RPC N+FM+SG+  TLCQLQAWSAEYK R++   + +   + DENDD+CG+CGDGGELIC
Sbjct: 821  RPCLNVFMKSGKPFTLCQLQAWSAEYKTRKSRTIKVVRTADDDENDDSCGLCGDGGELIC 880

Query: 1135 CDNCPSTFHQTCLSDKELPEGNWYCPSCTCQICRDVVREKKDSSTAILLKCSQCDDKYHN 956
            CDNCPSTFHQ CLS +ELPEG+WYCP+CTC IC ++V +K+D +++   KCSQC+ KYH+
Sbjct: 881  CDNCPSTFHQACLSTEELPEGSWYCPNCTCWICGELVNDKEDINSSNAFKCSQCEHKYHD 940

Query: 955  ACFT-----KGGCCKEVSDTWFCGESCQEVYSGLQSRVGISNLIADGFSWVLLRCNHGDP 791
            +C+      KGG     SDTWFCG SCQ VY GLQSRVGI N IADG  W LL+C H D 
Sbjct: 941  SCWKNKTIGKGGA----SDTWFCGGSCQAVYFGLQSRVGIINHIADGVCWTLLKCIHEDQ 996

Query: 790  KVHSAQRFALTADCNSKLAVALTIMEECFLPMVDPRTGINMIPQALYNWGSAFARLNFQG 611
            KVHSAQR AL A+CNSKLAVALTIMEECF  MVDPRTGI+MIP  LYNW S FARLNF G
Sbjct: 997  KVHSAQRLALKAECNSKLAVALTIMEECFQSMVDPRTGIDMIPHVLYNWRSEFARLNFHG 1056

Query: 610  FYTAVLEKGDELISVATIRVHGVTVAEMPLVATRSENRRQGMCRRLINAIEEMLISCKVE 431
            FYT VLEK D L+SVA+IR+HG TVAEMPL+AT S  RRQGMCRRL+ AIEEMLIS KVE
Sbjct: 1057 FYTVVLEKDDVLLSVASIRIHGATVAEMPLIATCSNYRRQGMCRRLMTAIEEMLISFKVE 1116

Query: 430  KLVVSAIPSLVDTWT 386
            KLVVSAIP LV+TWT
Sbjct: 1117 KLVVSAIPDLVETWT 1131



 Score =  170 bits (430), Expect = 4e-39
 Identities = 128/437 (29%), Positives = 208/437 (47%), Gaps = 22/437 (5%)
 Frame = -3

Query: 4339 LFGDKIEGLHDDGFEGSIAERRIFEEIFYGNDAGSNKKRCLDFGRKDNKHAXXXXXXXXX 4160
            +F   +E L ++ F GS  E RIF E+F+G   G   KR L    K  +           
Sbjct: 1    MFSSALEDLGNERFGGSHHENRIFAEVFFGKATGGTSKRSLVSSLKKLE----------- 49

Query: 4159 XXVKGSRLEDSCRVDNGYLNGKKNEEGESREIVNSGFARED----SYCG------PRNFS 4010
                 S++ D     N   +   ++      +V      E+    S  G       R   
Sbjct: 50   --CDDSKIPDMSLCSNSESSAVTSQSSSKSSLVEDTDINENYGEASVSGNFQERLEREDQ 107

Query: 4009 GVSCKHIKFSVVERSVPVDEKL----SDCLPNEKKNLYQLSFFDKVAPGMLRLDSSNGD- 3845
             +S K +KFSV + S+   + +    S  LP E  N                + S+N D 
Sbjct: 108  NMSVKRMKFSVDDPSISKHDTVKVFCSSGLPQEIIN---------------DVPSANRDS 152

Query: 3844 --RVMRCNLVESSSQCIVSSFYLPEQHMKVGSGSQTVVKASKSERLEFL-RTDGEEATEC 3674
              + +  ++VESS Q  +SS YL ++ +K+  G     K   + RL+   +  G++   C
Sbjct: 153  CRQTIAFHIVESSCQGAISSCYLSKKDVKIDRGRDVCNKDVLNCRLQIADKKVGKDVGIC 212

Query: 3673 IPIASPISHKGIVSKLLVDDACAA--HCSGAIKGDNGSSEDSVILNTDILDM--TYRPNC 3506
              +ASP+S + I +KLL+     A    SG I       E    LN+  L +  T R + 
Sbjct: 213  KAVASPVSQESIATKLLLTTPSTAILEMSGTIHATERLEE----LNSPALHISNTLRTDP 268

Query: 3505 IEDQRKRLRFHLNQLFISMGWSLDKRKRKNRNYQENVYISPKGKAFYELHKAWRSCGESL 3326
              D R  L+ H+ +L ++ GW +++ KR +R + E +Y SP+G+ F E  K WR CG++L
Sbjct: 269  KMDPRPVLQRHIIRLLLTAGWCVERYKRPSRKHMETIYRSPEGRIFREFPKVWRLCGQTL 328

Query: 3325 FSRKSNSLNKESGKQWSTIDELWLDISETLAYMEREMQHVEASLALARQWTLLDPFVTLI 3146
            ++ + + +  ++GK+W+ I   W D+S+ L  +E+E+   +   ALA QW+LLDPFV ++
Sbjct: 329  YAERYDFVQDDNGKEWTDICHFWSDLSDALMNIEKELDQTD---ALAHQWSLLDPFVNVV 385

Query: 3145 LIDRKLSSLRDGKPVKA 3095
             I+RK+ +LR G  VKA
Sbjct: 386  FINRKVGALRKGDTVKA 402


>emb|CBI20204.3| unnamed protein product [Vitis vinifera]
          Length = 1300

 Score =  597 bits (1538), Expect = e-167
 Identities = 328/655 (50%), Positives = 412/655 (62%), Gaps = 13/655 (1%)
 Frame = -3

Query: 1933 KCKKFQHEGSNNDELVSISSNGNIYVKSSFCNAAAEVPLHVNNECLDPRTFRKMTKSRKP 1754
            K KKF H   ++  LV +  +G+   + +  N      LHVN                KP
Sbjct: 655  KFKKFHHSVDSSGGLVQVVHDGDFSEEFNIENNTNNESLHVNI-------------GSKP 701

Query: 1753 NFNNGKKRKRFPGREIEDDDLLIAAFVVNKKFSSPSKQSTHKAGKKKG-VKRRHKSRKGS 1577
                G  ++     +IEDDDLLIAA + N+  SS +K+ + K   KK     + K RKG+
Sbjct: 702  ETKYGNGQRNSSSCQIEDDDLLIAAIIQNRNASSSTKRPSSKMKVKKSKAPNKLKKRKGN 761

Query: 1576 CKLLPRSPGLIGKQYTDGKWSSSGARTVLSWLVDVGVVYVNEVLQYRSPKDDAVVKDGWV 1397
            CK                        TVLSWL+D GV+  N+V+QYR+ KD+AVVKDG+V
Sbjct: 762  CK------------------------TVLSWLIDAGVISSNDVIQYRNLKDNAVVKDGYV 797

Query: 1396 TKDGILCKCCNKLLSVSEFKVHAGFKLYRPCSNLFMESGRSITLCQLQAWSAEYKARRNG 1217
            T+DGI+CKCC +L SV  FK+HAGFKL RPC NLFMESG+S TLCQLQAWS EYK R+ G
Sbjct: 798  TRDGIVCKCCTELFSVCNFKIHAGFKLNRPCRNLFMESGKSFTLCQLQAWSTEYKVRKGG 857

Query: 1216 RQELEAGEADENDDTCGMCGDGGELICCDNCPSTFHQTCLSDKELPEGNWYCPSCTCQIC 1037
             + ++  E D+NDD+CG+CGDGGELICCDNCPSTFHQ CLS KELPEGNWYCP+CTC+IC
Sbjct: 858  IKNVQIDEIDQNDDSCGLCGDGGELICCDNCPSTFHQACLSAKELPEGNWYCPNCTCRIC 917

Query: 1036 RDVVREKKDSSTAILLKCSQCDDKYHNACFTKGGCCKEV-SDTWFCGESCQEVYSGLQSR 860
             D+V++++ SS+ + LKCSQC+ KYH  C  K  C KEV  D  FCGE+CQE+YSGLQ  
Sbjct: 918  GDLVKDREASSSFLALKCSQCEHKYHMPCL-KEKCVKEVGGDARFCGENCQEIYSGLQGL 976

Query: 859  VGISNLIADGFSWVLLRCNHGDPKVHSAQRFALTADCNSKLAVALTIMEECFLPMVDPRT 680
            +G  N IADGF+W LLRC H D KVHS+Q+ AL A+CNSKLAVALTIMEECFL MVDPRT
Sbjct: 977  LGFVNHIADGFTWTLLRCIHDDQKVHSSQKLALKAECNSKLAVALTIMEECFLSMVDPRT 1036

Query: 679  GINMIPQALYNWGSAFARLNFQGFYTAVLEKGDELISVATIRVHGVTVAEMPLVATRSEN 500
            GI+MIP  LYN GS FARLNF GFYT VLEK D L+SVA+IRVHGVTVAEMPL+AT  + 
Sbjct: 1037 GIDMIPHVLYNRGSDFARLNFNGFYTVVLEKDDALVSVASIRVHGVTVAEMPLIATYEKF 1096

Query: 499  RRQGMCRRLINAIEEMLISCKVEKLVVSAIPSLVDTWTXXXXXXXXXXXXXXXXXXXXXX 320
            R +GMCR L+NAIE+ML S KVEK+VV+AIPSLV+TWT                      
Sbjct: 1097 RSKGMCRLLMNAIEKMLKSVKVEKIVVAAIPSLVETWTLGFGFKPVEDDEKASLKKINLM 1156

Query: 319  XXXXXXXXXXXXXKKEVMDIKAGPSNGL------LSGLDISEEYGLRKAILKESALQSSK 158
                         + +  D +AG    L      L+ LD S    +++ ++ ESA  S+ 
Sbjct: 1157 VFPGTILLKKSLYENQETDKQAGTDCALPLEAAKLTKLDAS----IKEELVIESAQLSNA 1212

Query: 157  NCRFVEVGSE-PASVLEFKKLQMGEE----QGSLVHRCLEKPQSPDCLSTLEVRE 8
            NC  VE G+E      + + LQ+GE       ++V   LE   + +  S  +VR+
Sbjct: 1213 NC-CVEGGAEMEIGCPDSQNLQVGESYEELASTIVDSQLELAPNVESESVYDVRQ 1266



 Score =  204 bits (519), Expect = 2e-49
 Identities = 176/645 (27%), Positives = 287/645 (44%), Gaps = 12/645 (1%)
 Frame = -3

Query: 4342 MLFGDKIEGLHDDGFEGSIAERRIFEEIFYGNDAGSNKKRCLDFGRKDNKHAXXXXXXXX 4163
            ML   +IE LHDD FEGS  E RIF E+F+ N+  S  KR L  G               
Sbjct: 1    MLLSKEIEDLHDDDFEGSNDECRIFREVFFRNNTDSASKRFLVTG--------------- 45

Query: 4162 XXXVKGSRLEDSCRVDNGYLNGKKNEEGESREIVNSGFAREDSYCGPRNFSGVSCKHIKF 3983
                     ED+ + D    +  +N    +R      F+   +     N   V+ K +K 
Sbjct: 46   ---FINFECEDNKQTDTSLCSNSENS-AVTRTSGPVSFSERFTLV-EGNDHDVNVKRMKL 100

Query: 3982 SVVERSVPVDEKLSDCLPNEKKNLYQLSFFDKVAP------GMLRLDSSNGDRVMRCNLV 3821
            S        D++L +  P+ +K      FFD  AP      GM    S +  + +RC+LV
Sbjct: 101  S--------DDELCNLKPDFEK------FFDSSAPLKEIVSGMSPPASESVYKKVRCHLV 146

Query: 3820 ESSSQCIVSSFYLPEQHMKVGSGSQTVVKASKSERLEFLRTDGEEATECI---PIASPIS 3650
            ESS Q +    YL ++H+++        + +   RL  L  DG +  E +    IASP+S
Sbjct: 147  ESSDQGVKYRCYLLKRHLQMERACSFSDRDAMKCRLSSL--DGSDRKEVVVSKAIASPVS 204

Query: 3649 HKGIVSKLLVDD--ACAAHCSGAIKGDNGSSEDSVILNTDILDMTYRPNCIEDQRKRLRF 3476
             +   +KLLV       A  SG         + SV L  D L  +     ++D R  L  
Sbjct: 205  QESFATKLLVASPPVAVADKSGPPLFSEDRPKKSVFLELDALYASPSVESLKDPRPLLHD 264

Query: 3475 HLNQLFISMGWSLDKRKRKNRNYQENVYISPKGKAFYELHKAWRSCGESLFSRKSNSLNK 3296
            H+N + I+ GWS++KRKR +R ++E+VY SP+G+   E  KAWR CGE+LF+ + + + +
Sbjct: 265  HINHVLIAAGWSIEKRKRNSRPHEESVYRSPEGRPIREFPKAWRLCGENLFADRYSLVQE 324

Query: 3295 ESGKQWSTIDELWLDISETLAYMEREMQHVEASLALARQWTLLDPFVTLILIDRKLSSLR 3116
               K+W+ I + W ++S  L Y+++++   E ++ LA +W+LLDPF+T++ ID+K+ +LR
Sbjct: 325  NDAKEWTDISQFWSNLSNVLTYIDKKINEAETAITLAHRWSLLDPFITVVFIDKKIGALR 384

Query: 3115 DGKPVKAVPTSLFDLRMRKDVLAAXXXXXXXXXXXXXXKDRTPSSVMGNTLFQAGTRVHG 2936
             G  V A  + + + + + + +                            L         
Sbjct: 385  KGNAVTAKRSIVVEKKQKNNAV----------------------------LVMKDVGCIK 416

Query: 2935 TRFARKIAEKEADCNRRVCSKYHKNGSS-PIFDNKRQGRLFKALQGVSIGLREERSVSVD 2759
             +FAR+      D    +      +GS+  +F+        K  Q       + R +  D
Sbjct: 417  NQFARR------DLPAAISDSSLASGSALTVFEGTYHMADEKGEQ-----FGDGRPLKFD 465

Query: 2758 TESDDAIGEQCPGTSRSQIRTSYHGSLEGCQPSVSFPQEDTYLHDVPVAYESEDIDVEGT 2579
            T   DA+  Q  G    +  +    SL+ C       Q    L+DVP+   SE++DV  +
Sbjct: 466  TV--DAMANQGGGMLEKKRSSLDPSSLQACVSDGMCIQSGKGLYDVPIT--SENVDVMRS 521

Query: 2578 VNVFPRQDSSITIPNVGGQKSRCIKQSSIKLIQDMSVNDCEESGE 2444
              V P QDS++  P+   Q      + S+ +++  S +  +E  E
Sbjct: 522  ETVSPHQDSNMNSPSCDKQILDHNMELSVDIVKAASNDMWDEKDE 566


Top