BLASTX nr result

ID: Coptis23_contig00003552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003552
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510981.1| conserved hypothetical protein [Ricinus comm...   244   1e-62
emb|CBI31241.3| unnamed protein product [Vitis vinifera]              239   4e-61
ref|XP_002277128.1| PREDICTED: lipoxygenase homology domain-cont...   239   4e-61
ref|XP_002303488.1| predicted protein [Populus trichocarpa] gi|2...   239   6e-61
ref|XP_004170482.1| PREDICTED: lipoxygenase homology domain-cont...   217   2e-54

>ref|XP_002510981.1| conserved hypothetical protein [Ricinus communis]
           gi|223550096|gb|EEF51583.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 181

 Score =  244 bits (624), Expect = 1e-62
 Identities = 107/147 (72%), Positives = 126/147 (85%)
 Frame = -2

Query: 587 ILVLFFLAAASGDSNSDECVYTLYVKTGSIIKAGTDSKISITLGDASGKSVWISDLEKWG 408
           +L+L  L +A+ + + DECVYTLYVKTGSIIKAGTDSKIS+TLGD+ G+SVW++DLE WG
Sbjct: 8   VLLLLALFSAAREDHDDECVYTLYVKTGSIIKAGTDSKISLTLGDSQGRSVWVTDLESWG 67

Query: 407 LMGPKYDYYERSNLDIFSGKGPCIGAPLCRINVTSDGLGAHHGWYCDYVEVTSTGPHEGC 228
           LMGPK+DYYER NLDIFSG+G CIG P+CR+N+TSDG G HHGWYCDY+EVTSTG H+ C
Sbjct: 68  LMGPKHDYYERGNLDIFSGRGRCIGTPICRLNLTSDGSGPHHGWYCDYIEVTSTGLHKEC 127

Query: 227 SQTIFYVDQWLGNDAPPYSLTALLDGC 147
           SQTIFYVDQWL  D  PY LTA +DGC
Sbjct: 128 SQTIFYVDQWLATDVAPYKLTAEIDGC 154


>emb|CBI31241.3| unnamed protein product [Vitis vinifera]
          Length = 211

 Score =  239 bits (610), Expect = 4e-61
 Identities = 105/147 (71%), Positives = 123/147 (83%)
 Frame = -2

Query: 587 ILVLFFLAAASGDSNSDECVYTLYVKTGSIIKAGTDSKISITLGDASGKSVWISDLEKWG 408
           ILV+    ++ G+SNSD CVY LYVKTGS+ KAGTDS ISITL D  GKSV +SDLE WG
Sbjct: 42  ILVIVLSYSSPGNSNSDNCVYALYVKTGSVPKAGTDSNISITLSDPGGKSVRVSDLESWG 101

Query: 407 LMGPKYDYYERSNLDIFSGKGPCIGAPLCRINVTSDGLGAHHGWYCDYVEVTSTGPHEGC 228
           LMG  ++YYER N+D+FSG+GPCIGAP+CR+N+TSDG G HHGWYCDYVEVT+TGPH  C
Sbjct: 102 LMGSNHNYYERGNMDVFSGRGPCIGAPICRLNLTSDGSGEHHGWYCDYVEVTATGPHRPC 161

Query: 227 SQTIFYVDQWLGNDAPPYSLTALLDGC 147
            QTIFYVDQWL +DAPPY LTA++DGC
Sbjct: 162 GQTIFYVDQWLASDAPPYQLTAVVDGC 188


>ref|XP_002277128.1| PREDICTED: lipoxygenase homology domain-containing protein 1-like
           [Vitis vinifera]
          Length = 183

 Score =  239 bits (610), Expect = 4e-61
 Identities = 105/147 (71%), Positives = 123/147 (83%)
 Frame = -2

Query: 587 ILVLFFLAAASGDSNSDECVYTLYVKTGSIIKAGTDSKISITLGDASGKSVWISDLEKWG 408
           ILV+    ++ G+SNSD CVY LYVKTGS+ KAGTDS ISITL D  GKSV +SDLE WG
Sbjct: 14  ILVIVLSYSSPGNSNSDNCVYALYVKTGSVPKAGTDSNISITLSDPGGKSVRVSDLESWG 73

Query: 407 LMGPKYDYYERSNLDIFSGKGPCIGAPLCRINVTSDGLGAHHGWYCDYVEVTSTGPHEGC 228
           LMG  ++YYER N+D+FSG+GPCIGAP+CR+N+TSDG G HHGWYCDYVEVT+TGPH  C
Sbjct: 74  LMGSNHNYYERGNMDVFSGRGPCIGAPICRLNLTSDGSGEHHGWYCDYVEVTATGPHRPC 133

Query: 227 SQTIFYVDQWLGNDAPPYSLTALLDGC 147
            QTIFYVDQWL +DAPPY LTA++DGC
Sbjct: 134 GQTIFYVDQWLASDAPPYQLTAVVDGC 160


>ref|XP_002303488.1| predicted protein [Populus trichocarpa] gi|222840920|gb|EEE78467.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  239 bits (609), Expect = 6e-61
 Identities = 102/130 (78%), Positives = 118/130 (90%)
 Frame = -2

Query: 536 ECVYTLYVKTGSIIKAGTDSKISITLGDASGKSVWISDLEKWGLMGPKYDYYERSNLDIF 357
           +C+Y LYVKTGSI+KAGTDSKIS+TLGDA G+SVW+ DL+ WGLM PK+DYYER+NLDIF
Sbjct: 1   DCIYALYVKTGSIMKAGTDSKISLTLGDAQGRSVWVPDLQSWGLMEPKHDYYERANLDIF 60

Query: 356 SGKGPCIGAPLCRINVTSDGLGAHHGWYCDYVEVTSTGPHEGCSQTIFYVDQWLGNDAPP 177
           SG+GPCI AP+CR+N+TSDG G+HHGWYCDYVEVTSTGPH+ CSQTIFYVDQWL  D PP
Sbjct: 61  SGRGPCISAPICRLNLTSDGQGSHHGWYCDYVEVTSTGPHKECSQTIFYVDQWLAADVPP 120

Query: 176 YSLTALLDGC 147
           + LTALLDGC
Sbjct: 121 FKLTALLDGC 130


>ref|XP_004170482.1| PREDICTED: lipoxygenase homology domain-containing protein 1-like
           [Cucumis sativus]
          Length = 163

 Score =  217 bits (552), Expect = 2e-54
 Identities = 93/131 (70%), Positives = 112/131 (85%)
 Frame = -2

Query: 539 DECVYTLYVKTGSIIKAGTDSKISITLGDASGKSVWISDLEKWGLMGPKYDYYERSNLDI 360
           ++CVYTLYVKTGSI+K GTDSKIS+TLGD+ G+SV ISDLE WGLM   +DY+ER N+DI
Sbjct: 3   EKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVEISDLESWGLMKQGHDYFERDNIDI 62

Query: 359 FSGKGPCIGAPLCRINVTSDGLGAHHGWYCDYVEVTSTGPHEGCSQTIFYVDQWLGNDAP 180
           FSG+G C+ +P+CR+N+TSDG G+HHGW+CDYVEVTS GPH  CSQT FYVDQWL  DAP
Sbjct: 63  FSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVTSAGPHRACSQTAFYVDQWLATDAP 122

Query: 179 PYSLTALLDGC 147
           P+ LT +LDGC
Sbjct: 123 PFQLTTILDGC 133


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