BLASTX nr result

ID: Coptis23_contig00003541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003541
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614149.1| hypothetical protein MTR_5g045440 [Medicago ...    75   2e-11
ref|XP_003599061.1| hypothetical protein MTR_3g027260 [Medicago ...    74   3e-11
ref|XP_003614716.1| hypothetical protein MTR_5g058190 [Medicago ...    72   2e-10
ref|XP_003605547.1| hypothetical protein MTR_4g033020, partial [...    70   4e-10
ref|XP_003596392.1| hypothetical protein MTR_2g076760 [Medicago ...    70   5e-10

>ref|XP_003614149.1| hypothetical protein MTR_5g045440 [Medicago truncatula]
           gi|355515484|gb|AES97107.1| hypothetical protein
           MTR_5g045440 [Medicago truncatula]
          Length = 720

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
 Frame = -2

Query: 397 PNSRNERQHTFSDLPTLEMKGSMPLIR*TKQAGERGRRYCQFSLIGRLDFNKIKLEEVKK 218
           P S N+      DLP   ++G    I+ ++   E+G  +C+ +L GRL  NK      K+
Sbjct: 41  PTSSND------DLPQPSIRGETLSIKISQGMYEKGMAFCKRNLRGRLVLNKGDKPYAKR 94

Query: 217 KIALDL---WKPKGNWKLVPLGKGFFMIHLVCEEDLRNILG-GPWRFGDQILRLSKWTPD 50
            I L L   WK  G W L+ LG+G++  +   EEDLR++   G       +LRL +W+ D
Sbjct: 95  DIELKLQKLWKTSGAWSLLSLGRGYYEFYFASEEDLRSVWAMGTVNLKPGLLRLFEWSKD 154

Query: 49  FDPTIQRSSTTFVWIK 2
           F+   QR++   VWI+
Sbjct: 155 FNLYTQRNTHAQVWIR 170


>ref|XP_003599061.1| hypothetical protein MTR_3g027260 [Medicago truncatula]
           gi|355488109|gb|AES69312.1| hypothetical protein
           MTR_3g027260 [Medicago truncatula]
          Length = 572

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
 Frame = -2

Query: 397 PNSRNERQHTFSDLPTLEMKGSMPLIR*TKQAGERGRRYCQFSLIGRLDFNKIKLEEVKK 218
           P S N+      DLP   ++G    I  ++   E+G  +C+ +L GRL  NK      K+
Sbjct: 50  PTSSND------DLPQPSIRGETLSINISQGMYEKGMAFCKRNLRGRLVLNKGDKPYPKR 103

Query: 217 KIALDL---WKPKGNWKLVPLGKGFFMIHLVCEEDLRNILG-GPWRFGDQILRLSKWTPD 50
            I L L   WK  G W L+ LG+G++  +   EEDLR++   G       +LRL +W+ D
Sbjct: 104 DIELKLQKLWKTSGAWSLLSLGRGYYEFYFASEEDLRSVWAMGTVNLKPGLLRLFEWSKD 163

Query: 49  FDPTIQRSSTTFVWIK 2
           F+   QRS+   VWI+
Sbjct: 164 FNLYTQRSTHAQVWIR 179


>ref|XP_003614716.1| hypothetical protein MTR_5g058190 [Medicago truncatula]
           gi|355516051|gb|AES97674.1| hypothetical protein
           MTR_5g058190 [Medicago truncatula]
          Length = 509

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
 Frame = -2

Query: 370 TFSD-LPTLEMKGSMPLIR*TKQAGERGRRYCQFSLIGRLDFNKIKLEEVKKKIALDL-- 200
           T SD LP   ++G M  +  +  A  RG  YC+ +L GRL  NK       K I   L  
Sbjct: 59  TSSDPLPLPSIRGEMLSVSISATAYTRGVDYCKINLRGRLVLNKGDKPYATKDITAKLQK 118

Query: 199 -WKPKGNWKLVPLGKGFFMIHLVCEEDLRNI-LGGPWRFGDQILRLSKWTPDFDPTIQRS 26
            WK KG W ++ LG+GF+      +ED+R++   G       +LRL +WT +F+   QR 
Sbjct: 119 IWKVKGPWHMLSLGRGFYEFFFASQEDMRSVWADGTVSLKPGLLRLFEWTKNFNLHTQRQ 178

Query: 25  STTFVWIK 2
           + T VWI+
Sbjct: 179 THTQVWIR 186


>ref|XP_003605547.1| hypothetical protein MTR_4g033020, partial [Medicago truncatula]
           gi|355506602|gb|AES87744.1| hypothetical protein
           MTR_4g033020, partial [Medicago truncatula]
          Length = 502

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
 Frame = -2

Query: 247 NKIKLEEVKKKIALDLWKPKGNWKLVPLGKGFFMIHLVCEEDLRNILG-GPWRFGDQILR 71
           N I +E ++KK+++ LWK  G W +  +GKG++       ED+R +   G W     IL+
Sbjct: 85  NPIPVESLRKKLSV-LWKEIGRWGVTSIGKGYYEFSFTFVEDMRRVRSTGSWNLNPSILK 143

Query: 70  LSKWTPDFDPTIQRSSTTFVWIK 2
           L  W+ DF P+IQ+ +TT VWI+
Sbjct: 144 LFAWSKDFSPSIQQQATTQVWIR 166


>ref|XP_003596392.1| hypothetical protein MTR_2g076760 [Medicago truncatula]
           gi|355485440|gb|AES66643.1| hypothetical protein
           MTR_2g076760 [Medicago truncatula]
          Length = 513

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
 Frame = -2

Query: 358 LPTLEMKGSMPLIR*TKQAGERGRRYCQFSLIGRLDFNKIKLEEVKKKIALDL---WKPK 188
           LPT  ++G    I  T+Q  E+G   C+ +L GRL  +K       K I L L   WK  
Sbjct: 50  LPTPLIRGESVSITITQQIYEKGLEVCKHNLRGRLVLSKGDKPYTTKDIHLKLQKQWKTT 109

Query: 187 GNWKLVPLGKGFFMIHLVCEEDLRNI-LGGPWRFGDQILRLSKWTPDFDPTIQRSSTTFV 11
           G W + PLG+GFF        DLR +   G       +LRL +WT DF+   QR++   V
Sbjct: 110 GEWSMRPLGRGFFEFTFASNIDLRMVWASGTVNLKPGVLRLFEWTKDFNMHKQRNTHAQV 169

Query: 10  WIK 2
           WI+
Sbjct: 170 WIR 172


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