BLASTX nr result

ID: Coptis23_contig00003538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003538
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520288.1| conserved hypothetical protein [Ricinus comm...   239   7e-61
ref|XP_002284637.2| PREDICTED: tetratricopeptide repeat protein ...   227   3e-57
ref|XP_002300958.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
emb|CBI18954.3| unnamed protein product [Vitis vinifera]              210   5e-52
ref|NP_001236332.1| uncharacterized protein LOC100305761 [Glycin...   207   4e-51

>ref|XP_002520288.1| conserved hypothetical protein [Ricinus communis]
           gi|223540507|gb|EEF42074.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 216

 Score =  239 bits (610), Expect = 7e-61
 Identities = 124/197 (62%), Positives = 144/197 (73%), Gaps = 3/197 (1%)
 Frame = -3

Query: 917 MKITLKKSNN--KRCVSHYKNLPFDQNEEEEKDCPFTQSGEEKHTKQQK-IHHNPDLQLA 747
           MK+  KK N   KR +S Y NLPFDQ ++E +      + ++    Q + +    + QLA
Sbjct: 15  MKVIWKKDNKTKKRTLSKYPNLPFDQEDQERESLNEITTNQQGFASQDEPLDSQSEKQLA 74

Query: 746 ESFQDEGNKLAEDGRYKEALGKWEAAITLIPDKAALHEQKAQVLLEIGDDWNALKAAARA 567
           ESFQ +GNKLAEDG+Y+EALGKWEAA+ L+P    LHEQKAQVLLEIGD WNALKAA RA
Sbjct: 75  ESFQSQGNKLAEDGKYREALGKWEAALNLMPGSTVLHEQKAQVLLEIGDAWNALKAATRA 134

Query: 566 TELEPSWAEAWITLARTQLNFGEPDAAIESFDRALAIKPDSKEARDDRQTALHLVKRRKX 387
           TELEPSWAEAWITL RTQLNFGEPD+AIESFDRALA+KPD KEA+DDR  ALHLVKRRK 
Sbjct: 135 TELEPSWAEAWITLGRTQLNFGEPDSAIESFDRALALKPDVKEAQDDRHAALHLVKRRKQ 194

Query: 386 XXXXXXXXXXSRFIVGD 336
                     SRF+V D
Sbjct: 195 LHSSGLSANESRFMVAD 211


>ref|XP_002284637.2| PREDICTED: tetratricopeptide repeat protein 33-like [Vitis
           vinifera]
          Length = 205

 Score =  227 bits (579), Expect = 3e-57
 Identities = 122/203 (60%), Positives = 145/203 (71%), Gaps = 9/203 (4%)
 Frame = -3

Query: 917 MKITLKK----SNNKRCVSHYKNLPFDQNEEEEK----DCPFTQSGEEKHTKQQKIHHNP 762
           MKIT KK    SN KR ++   NLPF+  E E+     +    + G+ +  K       P
Sbjct: 1   MKITWKKQSKGSNRKRSLAASSNLPFEDEEAEQPTSTMEAKVEEEGDFRGLKTLDSSDGP 60

Query: 761 DLQ-LAESFQDEGNKLAEDGRYKEALGKWEAAITLIPDKAALHEQKAQVLLEIGDDWNAL 585
             Q LA+SFQ +G+KLAE G+Y+EALGKWE A+TL+P KA LHEQKAQVLLEIGD WNAL
Sbjct: 61  STQQLADSFQAQGDKLAEGGKYREALGKWETALTLMPGKAVLHEQKAQVLLEIGDAWNAL 120

Query: 584 KAAARATELEPSWAEAWITLARTQLNFGEPDAAIESFDRALAIKPDSKEARDDRQTALHL 405
           KAA RATELEPSWAEAWITL R QLNFGEPD AI+SFDRALAIKP+S+EA+DDR++A HL
Sbjct: 121 KAATRATELEPSWAEAWITLGRAQLNFGEPDIAIKSFDRALAIKPNSEEAQDDRKSAFHL 180

Query: 404 VKRRKXXXXXXXXXXXSRFIVGD 336
           VKRRK           +RF+VGD
Sbjct: 181 VKRRKQLHSSGLSDTENRFVVGD 203


>ref|XP_002300958.1| predicted protein [Populus trichocarpa] gi|222842684|gb|EEE80231.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  218 bits (555), Expect = 2e-54
 Identities = 122/215 (56%), Positives = 140/215 (65%), Gaps = 21/215 (9%)
 Frame = -3

Query: 917 MKITLKKSNNKR---CVSHYKNLPFDQNEEEEKDCPFTQSGEEKHTKQQKIHHNP----- 762
           MK+T KK + KR    +S Y NLPFDQ +    D          HTKQ    H       
Sbjct: 1   MKVTWKKESKKRPLAAISKYPNLPFDQQDMIHND----DEDNNSHTKQLGASHKSLDSEA 56

Query: 761 -DLQLAESFQDEGNKLAEDGRYKEALGKWEAAITLIPDKAALHEQKAQVLLEIGDDWNAL 585
            + QLA+SFQD GNKLAEDG+Y+EALGKWEAA+ L+P  A LHEQKAQVLLEIGD W+AL
Sbjct: 57  SNRQLADSFQDLGNKLAEDGKYREALGKWEAALNLMPGNAVLHEQKAQVLLEIGDPWSAL 116

Query: 584 KAAAR------------ATELEPSWAEAWITLARTQLNFGEPDAAIESFDRALAIKPDSK 441
           KAA R            ATELE SWAEAWITL R QLNFGEPD+AIESFD+ALAIKPDSK
Sbjct: 117 KAATRENLNLLWNLLTGATELESSWAEAWITLGRAQLNFGEPDSAIESFDKALAIKPDSK 176

Query: 440 EARDDRQTALHLVKRRKXXXXXXXXXXXSRFIVGD 336
           EA+ DR  AL LVK+RK           +R++V D
Sbjct: 177 EAQGDRHGALQLVKKRKQLHSSGLSSKENRYVVSD 211


>emb|CBI18954.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score =  210 bits (534), Expect = 5e-52
 Identities = 103/140 (73%), Positives = 118/140 (84%)
 Frame = -3

Query: 755 QLAESFQDEGNKLAEDGRYKEALGKWEAAITLIPDKAALHEQKAQVLLEIGDDWNALKAA 576
           QLA+SFQ +G+KLAE G+Y+EALGKWE A+TL+P KA LHEQKAQVLLEIGD WNALKAA
Sbjct: 27  QLADSFQAQGDKLAEGGKYREALGKWETALTLMPGKAVLHEQKAQVLLEIGDAWNALKAA 86

Query: 575 ARATELEPSWAEAWITLARTQLNFGEPDAAIESFDRALAIKPDSKEARDDRQTALHLVKR 396
            RATELEPSWAEAWITL R QLNFGEPD AI+SFDRALAIKP+S+EA+DDR++A HLVKR
Sbjct: 87  TRATELEPSWAEAWITLGRAQLNFGEPDIAIKSFDRALAIKPNSEEAQDDRKSAFHLVKR 146

Query: 395 RKXXXXXXXXXXXSRFIVGD 336
           RK           +RF+VGD
Sbjct: 147 RKQLHSSGLSDTENRFVVGD 166


>ref|NP_001236332.1| uncharacterized protein LOC100305761 [Glycine max]
           gi|255626545|gb|ACU13617.1| unknown [Glycine max]
          Length = 192

 Score =  207 bits (526), Expect = 4e-51
 Identities = 108/198 (54%), Positives = 134/198 (67%), Gaps = 4/198 (2%)
 Frame = -3

Query: 917 MKITLKKSNNKRCV---SHYKNLPFDQNEEEEKDCPFTQSGEEKHTKQQKIHHNPDL-QL 750
           MK+T K    KRC+   SH+ +LPF+ N ++  +           T  +   H PD  QL
Sbjct: 1   MKVTWKNKKKKRCLPTLSHFTDLPFEHNHQQHSN-----------TDAEDGAHVPDATQL 49

Query: 749 AESFQDEGNKLAEDGRYKEALGKWEAAITLIPDKAALHEQKAQVLLEIGDDWNALKAAAR 570
           A  FQ +G+KLA DG+Y+EALGKWEA + L PD   +HEQKAQVLLE GD WNALKAA R
Sbjct: 50  ANEFQAQGDKLAMDGKYREALGKWEAVLALAPDVPVVHEQKAQVLLETGDAWNALKAATR 109

Query: 569 ATELEPSWAEAWITLARTQLNFGEPDAAIESFDRALAIKPDSKEARDDRQTALHLVKRRK 390
           ATEL+PSWAEAW+TL R QLNFGE D AIESFD ALA+KPD +EA+DDR+TA  LVK+RK
Sbjct: 110 ATELDPSWAEAWVTLGRAQLNFGESDNAIESFDHALALKPDYEEAQDDRKTASRLVKKRK 169

Query: 389 XXXXXXXXXXXSRFIVGD 336
                      +R++VG+
Sbjct: 170 QLHSSGLSATQNRYMVGE 187


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