BLASTX nr result

ID: Coptis23_contig00003521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003521
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM64715.1| unknown [Arabidopsis thaliana]                         105   2e-28
ref|NP_199917.1| uncharacterized protein [Arabidopsis thaliana] ...   105   2e-28
ref|NP_001032052.1| uncharacterized protein [Arabidopsis thalian...   105   2e-28
ref|XP_002864092.1| hypothetical protein ARALYDRAFT_495170 [Arab...   104   1e-27
dbj|BAJ90590.1| predicted protein [Hordeum vulgare subsp. vulgare]    108   2e-27

>gb|AAM64715.1| unknown [Arabidopsis thaliana]
          Length = 188

 Score =  105 bits (263), Expect(2) = 2e-28
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = -1

Query: 389 VHVLDLEDPDLWKWLTGQEQPPETVNSNPVFSAVRDKVMGNLNSHASPETRAAPGKPWVR 210
           +HVL+LE+PDLWKWLT QEQPPE V+SNPVFSA+ +KVM NLN HA+PETRAA G+PWVR
Sbjct: 112 IHVLNLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVR 171

Query: 209 VSWE 198
             W+
Sbjct: 172 -GWD 174



 Score = 44.7 bits (104), Expect(2) = 2e-28
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -2

Query: 202 GKPWVRRWDDYKKGRDSPTYGNQ 134
           G+PWVR WDD+K+GRD+P  GNQ
Sbjct: 166 GQPWVRGWDDFKRGRDTPISGNQ 188


>ref|NP_199917.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758251|dbj|BAB08750.1| unnamed protein product
           [Arabidopsis thaliana] gi|98960953|gb|ABF58960.1|
           At5g51040 [Arabidopsis thaliana]
           gi|110738284|dbj|BAF01071.1| hypothetical protein
           [Arabidopsis thaliana] gi|332008641|gb|AED96024.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 188

 Score =  105 bits (263), Expect(2) = 2e-28
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = -1

Query: 389 VHVLDLEDPDLWKWLTGQEQPPETVNSNPVFSAVRDKVMGNLNSHASPETRAAPGKPWVR 210
           +HVL+LE+PDLWKWLT QEQPPE V+SNPVFSA+ +KVM NLN HA+PETRAA G+PWVR
Sbjct: 112 IHVLNLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVR 171

Query: 209 VSWE 198
             W+
Sbjct: 172 -GWD 174



 Score = 44.7 bits (104), Expect(2) = 2e-28
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -2

Query: 202 GKPWVRRWDDYKKGRDSPTYGNQ 134
           G+PWVR WDD+K+GRD+P  GNQ
Sbjct: 166 GQPWVRGWDDFKRGRDAPISGNQ 188


>ref|NP_001032052.1| uncharacterized protein [Arabidopsis thaliana]
           gi|222423776|dbj|BAH19854.1| AT5G51040 [Arabidopsis
           thaliana] gi|332008642|gb|AED96025.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 184

 Score =  105 bits (263), Expect(2) = 2e-28
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = -1

Query: 389 VHVLDLEDPDLWKWLTGQEQPPETVNSNPVFSAVRDKVMGNLNSHASPETRAAPGKPWVR 210
           +HVL+LE+PDLWKWLT QEQPPE V+SNPVFSA+ +KVM NLN HA+PETRAA G+PWVR
Sbjct: 108 IHVLNLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVR 167

Query: 209 VSWE 198
             W+
Sbjct: 168 -GWD 170



 Score = 44.7 bits (104), Expect(2) = 2e-28
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = -2

Query: 202 GKPWVRRWDDYKKGRDSPTYGNQ 134
           G+PWVR WDD+K+GRD+P  GNQ
Sbjct: 162 GQPWVRGWDDFKRGRDAPISGNQ 184


>ref|XP_002864092.1| hypothetical protein ARALYDRAFT_495170 [Arabidopsis lyrata subsp.
           lyrata] gi|297309927|gb|EFH40351.1| hypothetical protein
           ARALYDRAFT_495170 [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score =  104 bits (259), Expect(2) = 1e-27
 Identities = 46/64 (71%), Positives = 56/64 (87%)
 Frame = -1

Query: 389 VHVLDLEDPDLWKWLTGQEQPPETVNSNPVFSAVRDKVMGNLNSHASPETRAAPGKPWVR 210
           +HVL+LE+PDLWKWLT QEQPPE V+SNPVFSA+ +KVM NLN HA+PETRAA G+PWV+
Sbjct: 109 IHVLNLENPDLWKWLTEQEQPPEEVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVK 168

Query: 209 VSWE 198
             W+
Sbjct: 169 -GWD 171



 Score = 43.5 bits (101), Expect(2) = 1e-27
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -2

Query: 202 GKPWVRRWDDYKKGRDSPTYGNQ 134
           G+PWV+ WDD+K+GRD+P  GNQ
Sbjct: 163 GQPWVKGWDDFKRGRDAPISGNQ 185


>dbj|BAJ90590.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 175

 Score =  108 bits (269), Expect(2) = 2e-27
 Identities = 46/64 (71%), Positives = 57/64 (89%)
 Frame = -1

Query: 389 VHVLDLEDPDLWKWLTGQEQPPETVNSNPVFSAVRDKVMGNLNSHASPETRAAPGKPWVR 210
           + +LDLE+PDLWKWLTGQEQPPETVNSNPVF+A++ KV  NL+ H+SPETR+APG+PWVR
Sbjct: 100 LQILDLENPDLWKWLTGQEQPPETVNSNPVFAAIKSKVTDNLSKHSSPETRSAPGQPWVR 159

Query: 209 VSWE 198
             W+
Sbjct: 160 -GWD 162



 Score = 39.3 bits (90), Expect(2) = 2e-27
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = -2

Query: 202 GKPWVRRWDDYKKGRDSPTYGNQ 134
           G+PWVR WDD K+G D P YGNQ
Sbjct: 154 GQPWVRGWDD-KRGLDGPKYGNQ 175


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