BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003519
         (1796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]   403   e-110
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...   402   e-109
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   393   e-107
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              369   1e-99
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   356   1e-95

>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score =  403 bits (1036), Expect = e-110
 Identities = 208/465 (44%), Positives = 300/465 (64%), Gaps = 2/465 (0%)
 Frame = +1

Query: 121  KEKESNIFNRIMGLGYRKDANAAETLNDWVEEGNIMXXXXXXXXXXXXXXXXXXXXAFQV 300
            K+KE++++ ++  L    + + AETL+ WV+EG  +                    A Q+
Sbjct: 25   KDKEASLYWKLSALR-GTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQI 83

Query: 301  MDWWRERGNDLSPGDHAIHLDLLSKIEGVDTAEKYFECLPEHARNKLTYGALLHCYCKEN 480
             +W  +  NDL+  D AI +DLL+K EG+  AE YF  L E A+   TYGALL+CYCKEN
Sbjct: 84   YEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKEN 143

Query: 481  MLEKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKGILPDIHTYT 660
            M++KA+ L +K++ELN+ S+ L YNN++S+ + +G+P  VP L+ EM+ K I  D++TY 
Sbjct: 144  MVDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYN 203

Query: 661  CLLDSYALLKDTKNAERVLLEMKEAGVKCDWTTYTSLASIYVKEGLIDKANSALKEVENM 840
             L++SYA +KD +  E+VL +MK+ GV+ DW TY +LA+IYV  G   KAN AL+++E  
Sbjct: 204  LLMNSYASVKDFEAVEQVLEKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQN 263

Query: 841  DKFRDRKAYHILLTLYSAISNKLGVYRVWESLKLTFPETANINYQFMLQALSRLGDTDGL 1020
                D +A+ +L+ LY+  SN  GV R WESLKL  P+  N +Y  ML ALS+LGD  GL
Sbjct: 264  KNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGL 323

Query: 1021 EKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNVGTLMKFMRF 1200
            EK F+EWES  + YD+RL+N++++SYL R+MIEEA  L E   K+G E  + TL  FM+F
Sbjct: 324  EKCFKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKLKTLDLFMKF 383

Query: 1201 YLHKHQMKLACKYFEEATLKV--KVNHWKASQETVSSFLNYFEEEKDADGAEYFCKLLKN 1374
            YL KHQ+ LA KY +    K   + N W  ++ET++ FL YFEE KD D AE FC+ ++ 
Sbjct: 384  YLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRK 443

Query: 1375 INSLPADVYSSLSRTYVAAGMMESQIHDRLKANGIEIGA*IKKFL 1509
            I+ L + +Y SL RTY+AAG  E  + +R+K +GIEI +  +K L
Sbjct: 444  ISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETEKLL 488


>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial [Vitis vinifera]
            gi|296089781|emb|CBI39600.3| unnamed protein product
            [Vitis vinifera]
          Length = 498

 Score =  402 bits (1034), Expect = e-109
 Identities = 208/465 (44%), Positives = 300/465 (64%), Gaps = 2/465 (0%)
 Frame = +1

Query: 121  KEKESNIFNRIMGLGYRKDANAAETLNDWVEEGNIMXXXXXXXXXXXXXXXXXXXXAFQV 300
            K+KE++++ ++  L    + + AETL+ WV+EG  +                    A Q+
Sbjct: 29   KDKEASLYWKLSALR-GTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQI 87

Query: 301  MDWWRERGNDLSPGDHAIHLDLLSKIEGVDTAEKYFECLPEHARNKLTYGALLHCYCKEN 480
             +W  +  NDL+  D AI +DLL+K EG+  AE YF  L E A+   TYGALL+CYCKEN
Sbjct: 88   YEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKEN 147

Query: 481  MLEKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKGILPDIHTYT 660
            ML+KA+ L +K++ELN+ S+ L YNN++S+ + +G+P  VP L+ EM+ K I  D++TY 
Sbjct: 148  MLDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYN 207

Query: 661  CLLDSYALLKDTKNAERVLLEMKEAGVKCDWTTYTSLASIYVKEGLIDKANSALKEVENM 840
             L++SYA +KD +  E+VL +MK+ GV+ DW TY +LA+IYV  G   KAN AL+++E  
Sbjct: 208  LLMNSYASVKDFEAVEQVLDKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQN 267

Query: 841  DKFRDRKAYHILLTLYSAISNKLGVYRVWESLKLTFPETANINYQFMLQALSRLGDTDGL 1020
                D +A+ +L+ LY+  SN  GV R WESLKL  P+  N +Y  ML ALS+LGD  GL
Sbjct: 268  KNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGL 327

Query: 1021 EKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNVGTLMKFMRF 1200
            EK F+EWES  + YD+RL+N++++SYL R++IEEA  L E   K+G E  + TL  FM+F
Sbjct: 328  EKCFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSESIAKRGPELKLKTLDLFMKF 387

Query: 1201 YLHKHQMKLACKYFEEATLKV--KVNHWKASQETVSSFLNYFEEEKDADGAEYFCKLLKN 1374
            YL KHQ+ LA KY +    K   + N W  ++ET++ FL YFEE KD D AE FC+ ++ 
Sbjct: 388  YLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRK 447

Query: 1375 INSLPADVYSSLSRTYVAAGMMESQIHDRLKANGIEIGA*IKKFL 1509
            I+ L + +Y SL RTY+AAG  E  + +R+K +GIEI +  +K L
Sbjct: 448  ISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETEKLL 492


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  393 bits (1009), Expect = e-107
 Identities = 208/454 (45%), Positives = 287/454 (63%), Gaps = 1/454 (0%)
 Frame = +1

Query: 127  KESNIFNRIMGLGYRKDANAAETLNDWVEEGNIMXXXXXXXXXXXXXXXXXXXXAFQVMD 306
            ++  +++R+  LG     + A+TLN+ ++EG ++                    A ++MD
Sbjct: 42   RQPRLYHRLSALG-ATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMD 100

Query: 307  WWRERGNDLSPGDHAIHLDLLSKIEGVDTAEKYFECLPEHARNKLTYGALLHCYCKENML 486
            W   R    S  D+A+ LDLLSK +G+ TAE+YF  L   A+N LTYG LL+CYCKE M 
Sbjct: 101  WMENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKME 160

Query: 487  EKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKGILPDIHTYTCL 666
            EKA+ L EKM ELN+AST L +NNLMS+ + +GKP  VPPL+ EMK + I PD  TY  L
Sbjct: 161  EKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNIL 220

Query: 667  LDSYALLKDTKNAERVLLEMK-EAGVKCDWTTYTSLASIYVKEGLIDKANSALKEVENMD 843
            + SYA L D + AERVL E+K E   K  WTTY++LA++YV   L +KA  ALK++E   
Sbjct: 221  MQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEM 280

Query: 844  KFRDRKAYHILLTLYSAISNKLGVYRVWESLKLTFPETANINYQFMLQALSRLGDTDGLE 1023
             F DR AYH L++LY+ I+N   V RVW SLK  FP+T N++Y  MLQAL+ L D DGL+
Sbjct: 281  GFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLK 340

Query: 1024 KYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNVGTLMKFMRFY 1203
              FEEW+SS   +D+RL N+ + ++L  DMI++AE +   AVK+ + P    L  FM  +
Sbjct: 341  ICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHH 400

Query: 1204 LHKHQMKLACKYFEEATLKVKVNHWKASQETVSSFLNYFEEEKDADGAEYFCKLLKNINS 1383
            L   ++  A KY E A  +VK N W+ + E V +FL YFEEEKD +GAE FCK+LKNI+ 
Sbjct: 401  LKVREIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNISG 460

Query: 1384 LPADVYSSLSRTYVAAGMMESQIHDRLKANGIEI 1485
            L ++ Y  L +T VAAG  E ++  R+K + IE+
Sbjct: 461  LDSNAYQLLLQTXVAAGRTEPEMRKRMKEDDIEV 494


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  369 bits (947), Expect = 1e-99
 Identities = 195/419 (46%), Positives = 266/419 (63%), Gaps = 1/419 (0%)
 Frame = +1

Query: 127  KESNIFNRIMGLGYRKDANAAETLNDWVEEGNIMXXXXXXXXXXXXXXXXXXXXAFQVMD 306
            ++  +++R+  LG     + A+TLN+ ++EG ++                    A ++MD
Sbjct: 81   RQPRLYHRLSALG-ATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMD 139

Query: 307  WWRERGNDLSPGDHAIHLDLLSKIEGVDTAEKYFECLPEHARNKLTYGALLHCYCKENML 486
            W   R    S  D+A+ LDLLSK +G+ TAE+YF  L   A+N LTYG LL+CYCKE M 
Sbjct: 140  WMENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKME 199

Query: 487  EKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKGILPDIHTYTCL 666
            EKA+ L EKM ELN+AST L +NNLMS+ + +GKP  VPPL+ EMK + I PD  TY  L
Sbjct: 200  EKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNIL 259

Query: 667  LDSYALLKDTKNAERVLLEMK-EAGVKCDWTTYTSLASIYVKEGLIDKANSALKEVENMD 843
            + SYA L D + AERVL E+K E   K  WTTY++LA++YV   L +KA  ALK++E   
Sbjct: 260  MQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEM 319

Query: 844  KFRDRKAYHILLTLYSAISNKLGVYRVWESLKLTFPETANINYQFMLQALSRLGDTDGLE 1023
             F DR AYH L++LY+ I+N   V RVW SLK  FP+T N++Y  MLQAL+ L D DGL+
Sbjct: 320  GFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLK 379

Query: 1024 KYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNVGTLMKFMRFY 1203
              FEEW+SS   +D+RL N+ + ++L  DMI++AE +   AVK+ + P    L  FM  +
Sbjct: 380  ICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHH 439

Query: 1204 LHKHQMKLACKYFEEATLKVKVNHWKASQETVSSFLNYFEEEKDADGAEYFCKLLKNIN 1380
            L   ++  A KY E A  +VK N W+ + E V +FL YFEEEKD +GAE FCK+LKNI+
Sbjct: 440  LKVREIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNIS 498


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
            predicted protein [Populus trichocarpa]
          Length = 473

 Score =  356 bits (914), Expect = 1e-95
 Identities = 198/466 (42%), Positives = 281/466 (60%), Gaps = 1/466 (0%)
 Frame = +1

Query: 115  LIKEKESNIFNRIMGLGYRKDANAAETLNDWVEEGNIMXXXXXXXXXXXXXXXXXXXXAF 294
            ++ EK   ++ R+  LG   ++  ++TLND+V EG                       A 
Sbjct: 7    VVLEKRKRLYKRLSELGASGES-VSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDYAI 65

Query: 295  QVMDWWRERGNDLSPGDHAIHLDLLSKIEGVDTAEKYFECLPEHARNKLTYGALLHCYCK 474
            +VM+W ++R  ++S   HA++LDL++K EG+  AE YF+ L    +N  T+GALL CYC+
Sbjct: 66   EVMEWMQKRKMNVS---HAVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCR 122

Query: 475  ENMLEKAMTLLEKMRELNYASTPLVYNNLMSMLVSMGKPGSVPPLITEMKNKGILPDIHT 654
            E M EKA+TL EKM ++ +  T L +NNL+S+ + + +P  V P++ EMK KG+ P   T
Sbjct: 123  ELMSEKALTLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFT 182

Query: 655  YTCLLDSYALLKDTKNAERVLLEMKEAGVK-CDWTTYTSLASIYVKEGLIDKANSALKEV 831
            Y   + SY  L D +  ERVL EMK  G K   WTTYT+LA+IYVK G  DKA SALK+V
Sbjct: 183  YNMWMQSYGCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKV 242

Query: 832  ENMDKFRDRKAYHILLTLYSAISNKLGVYRVWESLKLTFPETANINYQFMLQALSRLGDT 1011
            E   +   R+AYH L+TLY+  SN   V RVW SLK  F  T N++Y  ML  L++L D 
Sbjct: 243  EEQIERDYREAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDV 302

Query: 1012 DGLEKYFEEWESSYTLYDIRLTNILIDSYLERDMIEEAEKLREGAVKKGAEPNVGTLMKF 1191
            +GL K F+EWESS   YD+RL N+ I + LE DM EEA  + + A+K+           F
Sbjct: 303  EGLLKCFKEWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMF 362

Query: 1192 MRFYLHKHQMKLACKYFEEATLKVKVNHWKASQETVSSFLNYFEEEKDADGAEYFCKLLK 1371
            M F+L  HQ+ LA K+ + A  +VK   W+   +TVS+F  YFE+EKD +GAE  CK+LK
Sbjct: 363  MVFFLKNHQLDLALKHMKAAFSEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERLCKILK 422

Query: 1372 NINSLPADVYSSLSRTYVAAGMMESQIHDRLKANGIEIGA*IKKFL 1509
            +IN L ++ Y  L +TY+AAG +  ++  RL+ +GIEI   ++  L
Sbjct: 423  HINRLDSNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLL 468