BLASTX nr result

ID: Coptis23_contig00003507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003507
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327791.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
ref|XP_002310256.1| predicted protein [Populus trichocarpa] gi|2...   135   8e-30
ref|XP_004143521.1| PREDICTED: uncharacterized protein LOC101222...   129   4e-28
ref|XP_003612063.1| hypothetical protein MTR_5g020870 [Medicago ...   128   9e-28
ref|XP_002521549.1| conserved hypothetical protein [Ricinus comm...   127   2e-27

>ref|XP_002327791.1| predicted protein [Populus trichocarpa] gi|222836876|gb|EEE75269.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  141 bits (355), Expect = 1e-31
 Identities = 69/134 (51%), Positives = 87/134 (64%)
 Frame = +2

Query: 32  DEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEITRLSQRLHYY 211
           D+ S+++P EE+CQQI L R VS S+GR  AKAEAEIELE+++  KNFEI RL  RLHYY
Sbjct: 319 DQPSDSNPAEEICQQIYLARFVSESIGRGIAKAEAEIELEAQVEEKNFEIARLCDRLHYY 378

Query: 212 EVVNSEMSLRNQETVEIEXXXXXXXXXXXXWLWSSIGVSLVLGSMALAWSFIPTDGVSFP 391
           E VN EMS RNQE +E+             W+W SI  ++ LG+ ALAWS++P    S  
Sbjct: 379 EAVNREMSHRNQEVIEMARRNRQARKRRRKWIWGSIAAAITLGTTALAWSYLPAMRGSSS 438

Query: 392 TDTSHAPEVEGVAN 433
              SHAPE +  AN
Sbjct: 439 ASDSHAPEHDDTAN 452


>ref|XP_002310256.1| predicted protein [Populus trichocarpa] gi|222853159|gb|EEE90706.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  135 bits (340), Expect = 8e-30
 Identities = 66/134 (49%), Positives = 85/134 (63%)
 Frame = +2

Query: 32  DEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEITRLSQRLHYY 211
           D+ S+ +PVEE+CQQI L R VS S+GR  AKAEAEIE+E+++ +KNFEI RL  RLHYY
Sbjct: 280 DQPSDVNPVEEICQQIYLARFVSESIGRGIAKAEAEIEMEAQVEAKNFEIARLLDRLHYY 339

Query: 212 EVVNSEMSLRNQETVEIEXXXXXXXXXXXXWLWSSIGVSLVLGSMALAWSFIPTDGVSFP 391
           E VN E+S  NQE +E              W+W SI  ++ LG   LAWS++P    S  
Sbjct: 340 EAVNRELSQWNQEVIETARRNRQIRKRRQKWVWGSIAAAITLGMTTLAWSYLPAMSGSSS 399

Query: 392 TDTSHAPEVEGVAN 433
           +  SHAPE +  AN
Sbjct: 400 SSDSHAPEHDDTAN 413


>ref|XP_004143521.1| PREDICTED: uncharacterized protein LOC101222171 [Cucumis sativus]
           gi|449521451|ref|XP_004167743.1| PREDICTED:
           uncharacterized LOC101222171 [Cucumis sativus]
          Length = 455

 Score =  129 bits (325), Expect = 4e-28
 Identities = 62/144 (43%), Positives = 90/144 (62%)
 Frame = +2

Query: 2   LPTPSTNATEDEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEI 181
           LP+  T ATE+++ ++DP EELCQQ+ L R VS S+G+  A+AE E E+E+++  KNFEI
Sbjct: 313 LPSDPTVATEEKQLDSDPAEELCQQVNLARFVSESIGKGIARAEVETEMEAQLEVKNFEI 372

Query: 182 TRLSQRLHYYEVVNSEMSLRNQETVEIEXXXXXXXXXXXXWLWSSIGVSLVLGSMALAWS 361
            RL  RLHYYE VN EMS RNQE V++             W+W S+  ++ LG+  L WS
Sbjct: 373 ARLLDRLHYYEAVNHEMSQRNQEAVDLARRERLRRKRRQRWIWGSVATAITLGTAVLTWS 432

Query: 362 FIPTDGVSFPTDTSHAPEVEGVAN 433
           ++P+ G   P+  +   E + V +
Sbjct: 433 YLPS-GKDLPSSNNSKSEHDDVTD 455


>ref|XP_003612063.1| hypothetical protein MTR_5g020870 [Medicago truncatula]
           gi|355513398|gb|AES95021.1| hypothetical protein
           MTR_5g020870 [Medicago truncatula]
           gi|388497508|gb|AFK36820.1| unknown [Medicago
           truncatula]
          Length = 439

 Score =  128 bits (322), Expect = 9e-28
 Identities = 59/143 (41%), Positives = 87/143 (60%)
 Frame = +2

Query: 2   LPTPSTNATEDEKSEADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEI 181
           LP   T   E E+  +DPVE+LCQQ+ + R +S ++GR T + E E+E+E+++ SKNFEI
Sbjct: 296 LPADLTAVAEGEQLNSDPVEDLCQQLYVARFISNTIGRATVRTEVEMEMEAQLESKNFEI 355

Query: 182 TRLSQRLHYYEVVNSEMSLRNQETVEIEXXXXXXXXXXXXWLWSSIGVSLVLGSMALAWS 361
            RL +RLH YE +N EMS RNQE VE+             W+W S+   + LG+ A+AWS
Sbjct: 356 ARLMERLHCYETMNHEMSQRNQEAVEMARRERQRKSKKQKWIWGSLTTVIALGTAAVAWS 415

Query: 362 FIPTDGVSFPTDTSHAPEVEGVA 430
           ++P  G S+  +    P+ +  A
Sbjct: 416 YLPAGGESYSAEDHPVPKHDDAA 438


>ref|XP_002521549.1| conserved hypothetical protein [Ricinus communis]
           gi|223539227|gb|EEF40820.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 475

 Score =  127 bits (319), Expect = 2e-27
 Identities = 64/124 (51%), Positives = 79/124 (63%)
 Frame = +2

Query: 44  EADPVEELCQQIILVRAVSTSVGRETAKAEAEIELESEINSKNFEITRLSQRLHYYEVVN 223
           + DP EELCQQ+ L R VS S+GR  AKAEAE+E E++I +KNFEI RL  RLHYYE +N
Sbjct: 346 DTDPAEELCQQVYLARFVSDSIGRGMAKAEAEMEKEAQIEAKNFEIARLVDRLHYYEAMN 405

Query: 224 SEMSLRNQETVEIEXXXXXXXXXXXXWLWSSIGVSLVLGSMALAWSFIPTDGVSFPTDTS 403
            EMS RNQE VE+             W+W SI   + LG+ ALAWS++P    S  +  S
Sbjct: 406 REMSQRNQEAVEMARRNRQVRKGRQRWVWGSIATVVTLGTAALAWSYLPATKGSSSSSDS 465

Query: 404 HAPE 415
            APE
Sbjct: 466 LAPE 469


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