BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003498
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523375.1| PREDICTED: splicing factor 3A subunit 3-like...   118   4e-25
ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like...   117   7e-25
ref|XP_002513552.1| splicing factor 3a, putative [Ricinus commun...   115   3e-24
ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
gb|AFK47792.1| unknown [Medicago truncatula]                          110   1e-22

>ref|XP_003523375.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
          Length = 509

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/87 (68%), Positives = 74/87 (85%)
 Frame = -2

Query: 261 KLKEALSALGLKSGGTVKERAERLFLTKHTPLEQLDKKHFLKGSCGVKQNATAAVSERTG 82
           +LKEAL+ALGLK+GGTV++RAERLFLTKHTPLE+LDKKHF KG+ GV++N  AAVS+  G
Sbjct: 263 RLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDKKHFAKGARGVEKNGVAAVSQEDG 322

Query: 81  DLKNIALMEAKLKRLCEDLLNEIIVQT 1
           + K IALMEAK+ +LC DLL E I +T
Sbjct: 323 NSKEIALMEAKMTKLC-DLLEETIART 348


>ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
          Length = 509

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/87 (66%), Positives = 73/87 (83%)
 Frame = -2

Query: 261 KLKEALSALGLKSGGTVKERAERLFLTKHTPLEQLDKKHFLKGSCGVKQNATAAVSERTG 82
           +LKEAL+ALGLK+GGTV++RAERLFLTKHTPLE+LD+KHF KG+CGV++N  AAV +  G
Sbjct: 263 RLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDRKHFAKGACGVEKNGVAAVPQEDG 322

Query: 81  DLKNIALMEAKLKRLCEDLLNEIIVQT 1
           + K IALMEAK+ +LC  LL E I +T
Sbjct: 323 NSKEIALMEAKMTKLCH-LLEETIART 348


>ref|XP_002513552.1| splicing factor 3a, putative [Ricinus communis]
           gi|223547460|gb|EEF48955.1| splicing factor 3a, putative
           [Ricinus communis]
          Length = 459

 Score =  115 bits (289), Expect = 3e-24
 Identities = 60/87 (68%), Positives = 71/87 (81%)
 Frame = -2

Query: 261 KLKEALSALGLKSGGTVKERAERLFLTKHTPLEQLDKKHFLKGSCGVKQNATAAVSERTG 82
           KLKEAL+ALGLK+GGT+++RAERLFLTKHTPLE LDKKHFL+GS G +QN  AA S    
Sbjct: 213 KLKEALAALGLKTGGTIQQRAERLFLTKHTPLENLDKKHFLRGSRGTEQNGGAAASREAE 272

Query: 81  DLKNIALMEAKLKRLCEDLLNEIIVQT 1
           + K IAL EAK+ RLC DLL+E IV+T
Sbjct: 273 NSKEIALTEAKITRLC-DLLDETIVRT 298


>ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|222858447|gb|EEE95994.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/87 (68%), Positives = 72/87 (82%)
 Frame = -2

Query: 261 KLKEALSALGLKSGGTVKERAERLFLTKHTPLEQLDKKHFLKGSCGVKQNATAAVSERTG 82
           KLKEAL+ALGLKSGGTV++RAERLFLTK TPLE+LDKKHF+KGS G + N  AA S+   
Sbjct: 263 KLKEALAALGLKSGGTVQQRAERLFLTKDTPLEKLDKKHFVKGSRGSEPNGGAATSKEVD 322

Query: 81  DLKNIALMEAKLKRLCEDLLNEIIVQT 1
           + K IALMEAK+ +LC DLL+E IV+T
Sbjct: 323 NSKEIALMEAKINKLC-DLLDETIVRT 348


>gb|AFK47792.1| unknown [Medicago truncatula]
          Length = 429

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/87 (65%), Positives = 73/87 (83%)
 Frame = -2

Query: 261 KLKEALSALGLKSGGTVKERAERLFLTKHTPLEQLDKKHFLKGSCGVKQNATAAVSERTG 82
           +LKEAL+ALGLK+GGT+++RAERLFLTKHTPLE LDKKHF KG+ G ++N  AA + + G
Sbjct: 263 RLKEALAALGLKTGGTIQQRAERLFLTKHTPLEMLDKKHFAKGARGSEKNGVAA-APQDG 321

Query: 81  DLKNIALMEAKLKRLCEDLLNEIIVQT 1
           +LK IALMEAK+ +LC DLL+E I +T
Sbjct: 322 NLKEIALMEAKMNKLC-DLLDETITRT 347