BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003497
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513552.1| splicing factor 3a, putative [Ricinus commun...   266   1e-69
ref|NP_001051082.1| Os03g0717600 [Oryza sativa Japonica Group] g...   266   2e-69
ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like...   266   2e-69
ref|XP_003523375.1| PREDICTED: splicing factor 3A subunit 3-like...   266   2e-69
gb|ACJ85553.1| unknown [Medicago truncatula]                          266   2e-69

>ref|XP_002513552.1| splicing factor 3a, putative [Ricinus communis]
           gi|223547460|gb|EEF48955.1| splicing factor 3a, putative
           [Ricinus communis]
          Length = 459

 Score =  266 bits (681), Expect = 1e-69
 Identities = 124/168 (73%), Positives = 135/168 (80%)
 Frame = -1

Query: 563 NEIIVQTKENVEKKQALTFXXXXXXXXXXXXXXXXXXXXXXQQIYNPLKLPMGWDGKPIP 384
           +E IV+TKEN+ KKQALT+                      QQIYNPLKLPMGWDGKPIP
Sbjct: 292 DETIVRTKENIVKKQALTYDEMEAEREEEETQADTESDDEEQQIYNPLKLPMGWDGKPIP 351

Query: 383 YWLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIE 204
           YWLYKLHGLGQEFKCEICGN+SYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNE+TSIE
Sbjct: 352 YWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIE 411

Query: 203 EAQELWRKIQQRQGVNKWRPXXXXXXXXXEGNIYNKKTYTDLQRQGLL 60
           EA+ELW++IQ+RQGVNKWRP         EGNIYNKKTYTDLQRQGL+
Sbjct: 412 EAKELWKRIQERQGVNKWRPDLEEEYEDREGNIYNKKTYTDLQRQGLI 459


>ref|NP_001051082.1| Os03g0717600 [Oryza sativa Japonica Group]
           gi|108710766|gb|ABF98561.1| Splicing factor 3A subunit
           3, putative, expressed [Oryza sativa Japonica Group]
           gi|113549553|dbj|BAF12996.1| Os03g0717600 [Oryza sativa
           Japonica Group] gi|125545519|gb|EAY91658.1| hypothetical
           protein OsI_13297 [Oryza sativa Indica Group]
           gi|125587714|gb|EAZ28378.1| hypothetical protein
           OsJ_12358 [Oryza sativa Japonica Group]
          Length = 507

 Score =  266 bits (680), Expect = 2e-69
 Identities = 124/168 (73%), Positives = 133/168 (79%)
 Frame = -1

Query: 563 NEIIVQTKENVEKKQALTFXXXXXXXXXXXXXXXXXXXXXXQQIYNPLKLPMGWDGKPIP 384
           +EIIV+TKEN EKK  LT+                      QQIYNPLKLPMGWDGKPIP
Sbjct: 340 DEIIVRTKENAEKKLTLTYEEMEAEREEEEVQADSESDDEDQQIYNPLKLPMGWDGKPIP 399

Query: 383 YWLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIE 204
           YWLYKLHGLGQEFKCEICGNHSYWGRRA+ERHFKEWRHQHGMRCLGIPNTKNFNE+TSI+
Sbjct: 400 YWLYKLHGLGQEFKCEICGNHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIQ 459

Query: 203 EAQELWRKIQQRQGVNKWRPXXXXXXXXXEGNIYNKKTYTDLQRQGLL 60
           EA+ELW KIQQRQG+NKWRP         EGNIYNKKTYTDLQRQGL+
Sbjct: 460 EAKELWEKIQQRQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 507


>ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
          Length = 509

 Score =  266 bits (680), Expect = 2e-69
 Identities = 125/167 (74%), Positives = 133/167 (79%)
 Frame = -1

Query: 560 EIIVQTKENVEKKQALTFXXXXXXXXXXXXXXXXXXXXXXQQIYNPLKLPMGWDGKPIPY 381
           E I +TK+NV KKQALT+                      QQIYNPLKLPMGWDGKPIPY
Sbjct: 343 ETIARTKDNVVKKQALTYEEMEAEREEEETQEDSESEDEEQQIYNPLKLPMGWDGKPIPY 402

Query: 380 WLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIEE 201
           WLYKLHGLGQEFKCEICGN+SYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNE+TSIEE
Sbjct: 403 WLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEE 462

Query: 200 AQELWRKIQQRQGVNKWRPXXXXXXXXXEGNIYNKKTYTDLQRQGLL 60
           A+ELW+KIQQRQGVNKWRP         EGNIYNKKTYTDLQRQGL+
Sbjct: 463 AKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 509


>ref|XP_003523375.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
          Length = 509

 Score =  266 bits (680), Expect = 2e-69
 Identities = 124/167 (74%), Positives = 133/167 (79%)
 Frame = -1

Query: 560 EIIVQTKENVEKKQALTFXXXXXXXXXXXXXXXXXXXXXXQQIYNPLKLPMGWDGKPIPY 381
           E I +TK+NV KKQALT+                      +QIYNPLKLPMGWDGKPIPY
Sbjct: 343 ETIARTKDNVVKKQALTYEEMEAEREEEETQEDTESEDEEEQIYNPLKLPMGWDGKPIPY 402

Query: 380 WLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIEE 201
           WLYKLHGLGQEFKCEICGN+SYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNE+TSIEE
Sbjct: 403 WLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEE 462

Query: 200 AQELWRKIQQRQGVNKWRPXXXXXXXXXEGNIYNKKTYTDLQRQGLL 60
           A+ELW+KIQQRQGVNKWRP         EGNIYNKKTYTDLQRQGL+
Sbjct: 463 AKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 509


>gb|ACJ85553.1| unknown [Medicago truncatula]
          Length = 252

 Score =  266 bits (680), Expect = 2e-69
 Identities = 124/168 (73%), Positives = 134/168 (79%)
 Frame = -1

Query: 563 NEIIVQTKENVEKKQALTFXXXXXXXXXXXXXXXXXXXXXXQQIYNPLKLPMGWDGKPIP 384
           +E I +TK+N+ KKQALT+                      QQIYNPLKLPMGWDGKPIP
Sbjct: 85  DETITRTKDNIVKKQALTYEEIEAEREEEETQEDSESEDDEQQIYNPLKLPMGWDGKPIP 144

Query: 383 YWLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEVTSIE 204
           YWLYKLHGLGQEFKCEICGN+SYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNE+TSIE
Sbjct: 145 YWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIE 204

Query: 203 EAQELWRKIQQRQGVNKWRPXXXXXXXXXEGNIYNKKTYTDLQRQGLL 60
           EA+ELW+KIQQRQGVNKWRP         EGNIYNKKTYTDLQRQGL+
Sbjct: 205 EAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 252