BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003496
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   104   1e-33
ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   104   1e-33
emb|CBI38762.3| unnamed protein product [Vitis vinifera]              104   1e-33
ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...    99   3e-32
ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   100   5e-32

>ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
           [Vitis vinifera]
          Length = 382

 Score =  104 bits (260), Expect(2) = 1e-33
 Identities = 47/48 (97%), Positives = 47/48 (97%)
 Frame = +1

Query: 7   SVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIVFLA 150
           SVAKHLESANTMFSFIWWIIGFYWVSAGG DLTRDSPQLYWLCIVFLA
Sbjct: 185 SVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLA 232



 Score = 63.5 bits (153), Expect(2) = 1e-33
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +2

Query: 269 ALACVIGIAVCCCLPCIIAILYAVAEQEGAT 361
           A+ACVIGIAVCCCLPCIIAILY VA+QEGAT
Sbjct: 243 AVACVIGIAVCCCLPCIIAILYTVADQEGAT 273


>ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
           [Vitis vinifera]
          Length = 365

 Score =  104 bits (260), Expect(2) = 1e-33
 Identities = 47/48 (97%), Positives = 47/48 (97%)
 Frame = +1

Query: 7   SVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIVFLA 150
           SVAKHLESANTMFSFIWWIIGFYWVSAGG DLTRDSPQLYWLCIVFLA
Sbjct: 168 SVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLA 215



 Score = 63.5 bits (153), Expect(2) = 1e-33
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +2

Query: 269 ALACVIGIAVCCCLPCIIAILYAVAEQEGAT 361
           A+ACVIGIAVCCCLPCIIAILY VA+QEGAT
Sbjct: 226 AVACVIGIAVCCCLPCIIAILYTVADQEGAT 256


>emb|CBI38762.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  104 bits (260), Expect(2) = 1e-33
 Identities = 47/48 (97%), Positives = 47/48 (97%)
 Frame = +1

Query: 7   SVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIVFLA 150
           SVAKHLESANTMFSFIWWIIGFYWVSAGG DLTRDSPQLYWLCIVFLA
Sbjct: 132 SVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLA 179



 Score = 63.5 bits (153), Expect(2) = 1e-33
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +2

Query: 269 ALACVIGIAVCCCLPCIIAILYAVAEQEGAT 361
           A+ACVIGIAVCCCLPCIIAILY VA+QEGAT
Sbjct: 190 AVACVIGIAVCCCLPCIIAILYTVADQEGAT 220


>ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
           [Vitis vinifera]
          Length = 383

 Score = 99.0 bits (245), Expect(2) = 3e-32
 Identities = 44/49 (89%), Positives = 45/49 (91%)
 Frame = +1

Query: 1   SESVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIVFL 147
           S SVAKHLESANTMFSFIWWIIGFYWVSAGG  L RDSPQLYWLCI+FL
Sbjct: 185 STSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFL 233



 Score = 64.7 bits (156), Expect(2) = 3e-32
 Identities = 29/31 (93%), Positives = 31/31 (100%)
 Frame = +2

Query: 269 ALACVIGIAVCCCLPCIIAILYAVAEQEGAT 361
           ALACVIGIAVCCCLPCIIAILYAVA+QEGA+
Sbjct: 245 ALACVIGIAVCCCLPCIIAILYAVADQEGAS 275


>ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
           [Brachypodium distachyon]
          Length = 354

 Score = 99.8 bits (247), Expect(2) = 5e-32
 Identities = 44/50 (88%), Positives = 46/50 (92%)
 Frame = +1

Query: 1   SESVAKHLESANTMFSFIWWIIGFYWVSAGGPDLTRDSPQLYWLCIVFLA 150
           S S+AKHLES NTMFSFIWWIIGFYWVSAGG  LTRD+PQLYWLCIVFLA
Sbjct: 155 SSSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLA 204



 Score = 63.2 bits (152), Expect(2) = 5e-32
 Identities = 27/31 (87%), Positives = 31/31 (100%)
 Frame = +2

Query: 269 ALACVIGIAVCCCLPCIIAILYAVAEQEGAT 361
           ALAC+IGIAVCCCLPCIIAILYAV++QEGA+
Sbjct: 215 ALACIIGIAVCCCLPCIIAILYAVSDQEGAS 245