BLASTX nr result

ID: Coptis23_contig00003493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003493
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284456.1| PREDICTED: uncharacterized protein LOC100261...   119   3e-25
ref|XP_003597750.1| hypothetical protein MTR_2g101870 [Medicago ...   115   4e-24
ref|NP_001241341.1| uncharacterized protein LOC100818121 [Glycin...   115   4e-24
ref|XP_004150755.1| PREDICTED: uncharacterized protein LOC101205...   103   2e-20
ref|NP_001056895.2| Os06g0163300 [Oryza sativa Japonica Group] g...   100   9e-20

>ref|XP_002284456.1| PREDICTED: uncharacterized protein LOC100261724 [Vitis vinifera]
           gi|297743254|emb|CBI36121.3| unnamed protein product
           [Vitis vinifera]
          Length = 310

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +2

Query: 254 MMHAKSESDVTSLAPSSPSRSPKRHVYYVQSPSRDSHDGDKSSSMQATPVYNSPMESPSH 433
           M+H KSESD+TSLAPSSPSRSPKR VYYVQSPSRDSHDGDKSSSM ATP+YNSPMESPSH
Sbjct: 1   MLHTKSESDITSLAPSSPSRSPKRPVYYVQSPSRDSHDGDKSSSMHATPIYNSPMESPSH 60

Query: 434 P 436
           P
Sbjct: 61  P 61


>ref|XP_003597750.1| hypothetical protein MTR_2g101870 [Medicago truncatula]
           gi|355486798|gb|AES68001.1| hypothetical protein
           MTR_2g101870 [Medicago truncatula]
          Length = 309

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +2

Query: 254 MMHAKSESDVTSLAPSSPSRSPKRHVYYVQSPSRDSHDGDKSSSMQATPVYNSPMESPSH 433
           M+ AKSESD+TSLAPSSPSRSPKR VYYVQSPSRDSHDGDKSSSMQATP+ NSPMESPSH
Sbjct: 1   MLSAKSESDITSLAPSSPSRSPKRPVYYVQSPSRDSHDGDKSSSMQATPISNSPMESPSH 60

Query: 434 P 436
           P
Sbjct: 61  P 61


>ref|NP_001241341.1| uncharacterized protein LOC100818121 [Glycine max]
           gi|255635604|gb|ACU18152.1| unknown [Glycine max]
          Length = 309

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +2

Query: 254 MMHAKSESDVTSLAPSSPSRSPKRHVYYVQSPSRDSHDGDKSSSMQATPVYNSPMESPSH 433
           M+ AKSESD+TSLAPSSPSRSPKR VYYVQSPSRDSHDGDKSSSMQATP+ NSPMESPSH
Sbjct: 2   MLSAKSESDITSLAPSSPSRSPKRPVYYVQSPSRDSHDGDKSSSMQATPISNSPMESPSH 61

Query: 434 P 436
           P
Sbjct: 62  P 62


>ref|XP_004150755.1| PREDICTED: uncharacterized protein LOC101205854 [Cucumis sativus]
           gi|449525756|ref|XP_004169882.1| PREDICTED:
           uncharacterized protein LOC101227014 [Cucumis sativus]
          Length = 307

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/61 (85%), Positives = 56/61 (91%)
 Frame = +2

Query: 254 MMHAKSESDVTSLAPSSPSRSPKRHVYYVQSPSRDSHDGDKSSSMQATPVYNSPMESPSH 433
           MMHAKS+SDVTSLAPSSP RSPKR +YYVQSPSRDSHDGDKSS+  ATP +NSPMESPSH
Sbjct: 1   MMHAKSDSDVTSLAPSSP-RSPKRPLYYVQSPSRDSHDGDKSST-HATPAFNSPMESPSH 58

Query: 434 P 436
           P
Sbjct: 59  P 59


>ref|NP_001056895.2| Os06g0163300 [Oryza sativa Japonica Group]
           gi|55296085|dbj|BAD67647.1| unknown protein [Oryza
           sativa Japonica Group] gi|215707198|dbj|BAG93658.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|215741050|dbj|BAG97545.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765711|dbj|BAG87408.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218197648|gb|EEC80075.1| hypothetical protein
           OsI_21794 [Oryza sativa Indica Group]
           gi|222635014|gb|EEE65146.1| hypothetical protein
           OsJ_20229 [Oryza sativa Japonica Group]
           gi|255676743|dbj|BAF18809.2| Os06g0163300 [Oryza sativa
           Japonica Group]
          Length = 322

 Score =  100 bits (250), Expect = 9e-20
 Identities = 55/70 (78%), Positives = 56/70 (80%), Gaps = 9/70 (12%)
 Frame = +2

Query: 254 MMHAKSESDVTSLAPSSPSRSPKR--------HVYYVQSPSRDSHDGD-KSSSMQATPVY 406
           MMHAKSESDVTSLAPSSP RSPKR          YYVQSPSR+SHDG  KSSSMQATPVY
Sbjct: 1   MMHAKSESDVTSLAPSSPPRSPKRGGGVGVGGANYYVQSPSRESHDGGYKSSSMQATPVY 60

Query: 407 NSPMESPSHP 436
           NSP ESPSHP
Sbjct: 61  NSPNESPSHP 70


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