BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003486
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI41066.3| unnamed protein product [Vitis vinifera]              119   1e-24
ref|XP_002271937.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   115   1e-23
ref|XP_002308745.1| predicted protein [Populus trichocarpa] gi|2...   107   6e-21
ref|XP_003526988.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   105   1e-20
gb|ABK24359.1| unknown [Picea sitchensis]                             105   2e-20

>emb|CBI41066.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score =  119 bits (297), Expect = 1e-24
 Identities = 65/124 (52%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
 Frame = -1

Query: 368 KETKFALAALME*--Q*KATLEIQLLGHRKGTSGRTALPPPVKNSSSAKFT*SLSQSNNF 195
           KE  FALAALME   Q KATL++ LLG R+GT GRT LPPPVK             S+NF
Sbjct: 288 KEADFALAALMEIPSQYKATLDLHLLGCRRGTPGRTPLPPPVKIHPIVNSYTPYQGSSNF 347

Query: 194 KQTSACDQCASAPPENLSNEKHACPICLLSIEDLVFGCGHQTCYNCGKELLLFPICRNLI 15
           +Q+ A     S  P + S+    CP+C  S +DL FGCGHQ CY CGKEL+  PICR  I
Sbjct: 348 EQSIAYRFAPSPAPTDNSSHNRNCPVCFFSTKDLAFGCGHQACYECGKELVNCPICRTHI 407

Query: 14  GTRI 3
            TRI
Sbjct: 408 TTRI 411


>ref|XP_002271937.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
          Length = 420

 Score =  115 bits (289), Expect = 1e-23
 Identities = 68/129 (52%), Positives = 79/129 (61%), Gaps = 7/129 (5%)
 Frame = -1

Query: 368 KETKFALAALME*--Q*KATLEIQLLGHRKGTSGRTALPPPVKNSSSAKFT*SLSQSNNF 195
           KE  FALAALME   Q KATL++ LLG R+GT GRT LPPPVK             S+NF
Sbjct: 288 KEADFALAALMEIPSQYKATLDLHLLGCRRGTPGRTPLPPPVKIHPIVNSYTPYQGSSNF 347

Query: 194 KQTSACDQCAS-APPENLS----NEKHACPICLLSIEDLVFGCGHQTCYNCGKELLLFPI 30
           +Q+ A     S AP +N S    N+   CP+C  S +DL FGCGHQ CY CGKEL+  PI
Sbjct: 348 EQSIAYRFAPSPAPTDNSSHNRFNDLQNCPVCFFSTKDLAFGCGHQACYECGKELVNCPI 407

Query: 29  CRNLIGTRI 3
           CR  I TRI
Sbjct: 408 CRTHITTRI 416


>ref|XP_002308745.1| predicted protein [Populus trichocarpa] gi|222854721|gb|EEE92268.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  107 bits (266), Expect = 6e-21
 Identities = 62/125 (49%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
 Frame = -1

Query: 368 KETKFALAALME*--Q*KATLEIQLLGHRKGTSGRTALPPPVKNSSSAKF-T*SLSQSNN 198
           KET+FAL ALME   Q KAT+++QLLG +KG  GR ALPPP+ N S   + T S S+SN 
Sbjct: 285 KETEFALDALMEIPSQYKATIDLQLLGCQKGAPGRNALPPPLGNGSVNSYPTYSRSRSN- 343

Query: 197 FKQTSACDQCASAPPENLSNEKHACPICLLSIEDLVFGCGHQTCYNCGKELLLFPICRNL 18
                     A  P  + S++   CP CL + +DL FGCGHQTCY+CGK+L   PIC+  
Sbjct: 344 ---------AAYVPSTDHSSDNRHCPSCLWNKKDLAFGCGHQTCYDCGKDLNQCPICQAY 394

Query: 17  IGTRI 3
           I T+I
Sbjct: 395 ITTKI 399


>ref|XP_003526988.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 428

 Score =  105 bits (263), Expect = 1e-20
 Identities = 59/127 (46%), Positives = 82/127 (64%), Gaps = 5/127 (3%)
 Frame = -1

Query: 368 KETKFALAALME*--Q*KATLEIQLLGHRKGTS-GRTALPPPVKNSSSAKFT*SLSQSNN 198
           KET+FAL+ALME   Q KATLE+ +LG R+G    RT LPPP+  ++S       S+ N+
Sbjct: 300 KETEFALSALMEIPSQYKATLELNILGARRGKDIDRTPLPPPLYGAASFNSP-KTSRQNS 358

Query: 197 FKQT--SACDQCASAPPENLSNEKHACPICLLSIEDLVFGCGHQTCYNCGKELLLFPICR 24
           F+ +  S+    ++ PP   +++   CPICL   +D+ FGCGHQTC  CG++L L PICR
Sbjct: 359 FRPSAPSSRHDVSTNPPATSASDNQVCPICLTDPKDMAFGCGHQTCCECGQDLELCPICR 418

Query: 23  NLIGTRI 3
           + I TRI
Sbjct: 419 STIDTRI 425


>gb|ABK24359.1| unknown [Picea sitchensis]
          Length = 423

 Score =  105 bits (262), Expect = 2e-20
 Identities = 60/131 (45%), Positives = 85/131 (64%), Gaps = 9/131 (6%)
 Frame = -1

Query: 368 KETKFALAALME*--Q*KATLEIQLLGHRKGTS-GRTALPPPVKNSSSAKFT*SLSQSNN 198
           KET+FALA+LME   Q KATL++Q+LG R+G    R  LPPP+ N + A       ++++
Sbjct: 291 KETEFALASLMEIPSQYKATLDLQILGRRRGKMPDRFPLPPPLGNDNYAARQ-QYQRADS 349

Query: 197 FKQTSACDQCA-----SAPPE-NLSNEKHACPICLLSIEDLVFGCGHQTCYNCGKELLLF 36
           F+  +  + C      SAPPE   + +   CPICL++ +DL FGCGHQTCY+CG+ ++  
Sbjct: 350 FQTNTPRNHCGDSFAGSAPPEFKDTQDAQMCPICLMNAKDLAFGCGHQTCYDCGQNIVTC 409

Query: 35  PICRNLIGTRI 3
           PICR+ I TRI
Sbjct: 410 PICRSDITTRI 420