BLASTX nr result

ID: Coptis23_contig00003484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003484
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24764.3| unnamed protein product [Vitis vinifera]              110   3e-22
ref|XP_002280402.1| PREDICTED: dihydrodipicolinate reductase 1, ...   110   3e-22
ref|XP_002533348.1| dihydrodipicolinate reductase, putative [Ric...   102   7e-20
ref|XP_003558376.1| PREDICTED: probable dihydrodipicolinate redu...   100   3e-19
ref|XP_003528814.1| PREDICTED: dihydrodipicolinate reductase 2, ...   100   5e-19

>emb|CBI24764.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  110 bits (275), Expect = 3e-22
 Identities = 66/147 (44%), Positives = 86/147 (58%), Gaps = 5/147 (3%)
 Frame = -2

Query: 426 SRGFNVLVLVNTCTSNMGKIVIETTVARGLHIYS---SCVIW**RDVRQSSASV--YGPS 262
           S+   + ++VN CT  MGK VI+  V+ GLH+     SC     + V      +  +GPS
Sbjct: 131 SQNLGLPIMVNGCTGKMGKAVIQAAVSAGLHLVPVSFSCAEESGQTVEVCGKEIKLHGPS 190

Query: 261 ERERVLASVLEAHPRCNCGGL*RASCSEWHDVDLFGILIWG*NNAEVYCKVGVSFIMGTS 82
            RE +LASV++ +P             ++   D         +NAE+YCKVGV F+MGT+
Sbjct: 191 GRENILASVVDEYPNL--------IVVDYTVPDAVN------DNAELYCKVGVPFVMGTT 236

Query: 81  GGDRERLYKTVNDSNTYAVISPQMGKQ 1
           GGDRERLYKTV DSN YAVISPQMGKQ
Sbjct: 237 GGDRERLYKTVKDSNVYAVISPQMGKQ 263


>ref|XP_002280402.1| PREDICTED: dihydrodipicolinate reductase 1, chloroplastic-like
           [Vitis vinifera]
          Length = 349

 Score =  110 bits (275), Expect = 3e-22
 Identities = 66/147 (44%), Positives = 86/147 (58%), Gaps = 5/147 (3%)
 Frame = -2

Query: 426 SRGFNVLVLVNTCTSNMGKIVIETTVARGLHIYS---SCVIW**RDVRQSSASV--YGPS 262
           S+   + ++VN CT  MGK VI+  V+ GLH+     SC     + V      +  +GPS
Sbjct: 70  SQNLGLPIMVNGCTGKMGKAVIQAAVSAGLHLVPVSFSCAEESGQTVEVCGKEIKLHGPS 129

Query: 261 ERERVLASVLEAHPRCNCGGL*RASCSEWHDVDLFGILIWG*NNAEVYCKVGVSFIMGTS 82
            RE +LASV++ +P             ++   D         +NAE+YCKVGV F+MGT+
Sbjct: 130 GRENILASVVDEYPNL--------IVVDYTVPDAVN------DNAELYCKVGVPFVMGTT 175

Query: 81  GGDRERLYKTVNDSNTYAVISPQMGKQ 1
           GGDRERLYKTV DSN YAVISPQMGKQ
Sbjct: 176 GGDRERLYKTVKDSNVYAVISPQMGKQ 202


>ref|XP_002533348.1| dihydrodipicolinate reductase, putative [Ricinus communis]
           gi|223526813|gb|EEF29033.1| dihydrodipicolinate
           reductase, putative [Ricinus communis]
          Length = 354

 Score =  102 bits (254), Expect = 7e-20
 Identities = 63/153 (41%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
 Frame = -2

Query: 432 LNSRGFNVLVLVNTCTSNMGKIVIETTVARGLHIY---------SSCVIW**RDVRQSSA 280
           +++  F++ ++VN C+  MGK VI+   + GL I          S   +     V     
Sbjct: 73  MSTNSFDIPIMVNGCSGKMGKAVIKAADSAGLQILPVSFGSPEESGITV----QVCGKDI 128

Query: 279 SVYGPSERERVLASVLEAHPRCNCGGL*RASCSEWHDVDLFGILIWG*NNAEVYCKVGVS 100
            +YGPSERE VLAS+   HP                 VD + +      NA++YCKVGV 
Sbjct: 129 KIYGPSEREGVLASICNEHPNLIV-------------VD-YTVPAAVNGNADLYCKVGVP 174

Query: 99  FIMGTSGGDRERLYKTVNDSNTYAVISPQMGKQ 1
           F+MGT+GGDR+ LYKTV DS  YAVISPQMGKQ
Sbjct: 175 FVMGTTGGDRDLLYKTVEDSKIYAVISPQMGKQ 207


>ref|XP_003558376.1| PREDICTED: probable dihydrodipicolinate reductase 2,
           chloroplastic-like [Brachypodium distachyon]
          Length = 339

 Score =  100 bits (249), Expect = 3e-19
 Identities = 60/140 (42%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
 Frame = -2

Query: 405 VLVNTCTSNMGKIVIETTVARGLHIYSSCVIW**R-----DVRQSSASVYGPSERERVLA 241
           +LVN CT  MG  V E   +RGLH+         R      +  +S  +YGPS RE VL+
Sbjct: 67  ILVNGCTGKMGVSVAEAAASRGLHLVPVSFSSRERLDKTVQIGDTSIEIYGPSAREDVLS 126

Query: 240 SVLEAHPRCNCGGL*RASCSEWHDVDLFGILIWG*NNAEVYCKVGVSFIMGTSGGDRERL 61
           SV++  P             ++   D         +NAE+YCK+GV F+MGT+GGDR+ L
Sbjct: 127 SVVDEFPD--------VVVVDYTAPDSVN------SNAELYCKLGVPFVMGTTGGDRQLL 172

Query: 60  YKTVNDSNTYAVISPQMGKQ 1
           YK+V DSN YA+ISPQMGKQ
Sbjct: 173 YKSVQDSNNYALISPQMGKQ 192


>ref|XP_003528814.1| PREDICTED: dihydrodipicolinate reductase 2, chloroplastic-like
           [Glycine max]
          Length = 344

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 65/149 (43%), Positives = 85/149 (57%), Gaps = 5/149 (3%)
 Frame = -2

Query: 432 LNSRGFNVLVLVNTCTSNMGKIVIETTVARGLHIYS---SCVIW**R--DVRQSSASVYG 268
           L+S+   + ++VN CT  MGK VI    A GL++      C     +   + +    V+G
Sbjct: 63  LSSKNTGLPIMVNACTGKMGKAVINAAEAAGLNVVPVSFGCEEESGQTFQIGEKEFLVHG 122

Query: 267 PSERERVLASVLEAHPRCNCGGL*RASCSEWHDVDLFGILIWG*NNAEVYCKVGVSFIMG 88
           PS+RE  LASVL+ +P                 VD + I      NAE+YCKVGV F+MG
Sbjct: 123 PSDRESALASVLDQYPNLIV-------------VD-YTIPNAVNGNAELYCKVGVPFVMG 168

Query: 87  TSGGDRERLYKTVNDSNTYAVISPQMGKQ 1
           T+GGDR+ L+KTV DSN YAVISPQMGKQ
Sbjct: 169 TTGGDRDLLHKTVLDSNIYAVISPQMGKQ 197


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