BLASTX nr result

ID: Coptis23_contig00003482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003482
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277155.2| PREDICTED: uncharacterized protein LOC100246...   266   6e-87
gb|ABK25232.1| unknown [Picea sitchensis]                             244   3e-74
ref|XP_004143471.1| PREDICTED: uncharacterized protein LOC101210...   223   1e-71
ref|XP_002314721.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-70
ref|XP_002312515.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-70

>ref|XP_002277155.2| PREDICTED: uncharacterized protein LOC100246806 [Vitis vinifera]
           gi|296086423|emb|CBI32012.3| unnamed protein product
           [Vitis vinifera]
          Length = 307

 Score =  266 bits (681), Expect(2) = 6e-87
 Identities = 136/228 (59%), Positives = 171/228 (75%), Gaps = 1/228 (0%)
 Frame = -3

Query: 681 RNIGPSRQITILNGDSGWTGNMANLAVPTLALGAVGYGYMWWKGLKLSDLMYVTKKSMAT 502
           + +  +RQIT+LNG+SG  GN+ +LA+P   LGA+GYGYMWWKGL +SDLMYVTKK+M T
Sbjct: 74  KQLASARQITVLNGNSGQIGNITSLAIPAATLGALGYGYMWWKGLSISDLMYVTKKNMET 133

Query: 501 AVASMTKHLEQVSTALAATKRHLTQRIENLDGKLDEQKEMSKLIKNEVTEVRGDLSQIGY 322
           AV ++ KHLE VS AL+ATKRHLTQRIENLDGKLDEQKE+SKLIKNEVTE RGD+SQIG+
Sbjct: 134 AVTNLKKHLEHVSDALSATKRHLTQRIENLDGKLDEQKEISKLIKNEVTEARGDISQIGF 193

Query: 321 DLDSLHRLVTGLDGKILSLEGKQDYANAGVYYLVNFVGAKDEKISE-YLKLMPKPNKPRG 145
           DLDSL R+V+GLDGKI SLE KQ++A  GV YL N V  +   +SE  LK +  P K  G
Sbjct: 194 DLDSLQRMVSGLDGKIGSLEYKQNFAVEGVVYLCNAVNGRSVPMSETMLKQLKLPGKSHG 253

Query: 144 YIGFPETQDSKGLKQIADTLKLVNGSATDTTVQDNIGRMDSCPRSLTR 1
            +   E    +GLK+IA ++   N  +++  VQD + ++D  PRSLTR
Sbjct: 254 LLTSTEAPSFQGLKEIAGSIISENSRSSNGIVQDGVDKLDDQPRSLTR 301



 Score = 82.0 bits (201), Expect(2) = 6e-87
 Identities = 41/54 (75%), Positives = 49/54 (90%)
 Frame = -1

Query: 959 MAMQTAGIGFTKLIILVGAGYTGTIVLKNNKLSDLLGELQSLVKGIEKTGDSSS 798
           MAMQT G+G +K++ILVGAGYT TI+LKN KLSD+LGELQSLVKG+EK GDSS+
Sbjct: 1   MAMQT-GVGVSKILILVGAGYTSTILLKNGKLSDILGELQSLVKGLEKKGDSSN 53


>gb|ABK25232.1| unknown [Picea sitchensis]
          Length = 324

 Score =  244 bits (622), Expect(2) = 3e-74
 Identities = 128/214 (59%), Positives = 164/214 (76%), Gaps = 2/214 (0%)
 Frame = -3

Query: 681 RNIGPSRQITILNGDSGWTGNMANLAVPTLALGAVGYGYMWWKGLKLSDLMYVTKKSMAT 502
           R +  SR IT+LNG+SG +GN A+L +P  ALGA+GY YMWWKG   SDLMYVTK++M  
Sbjct: 73  RQLASSRPITVLNGNSGQSGNAASLLMPVAALGAMGYCYMWWKGWSFSDLMYVTKRNMTN 132

Query: 501 AVASMTKHLEQVSTALAATKRHLTQRIENLDGKLDEQKEMSKLIKNEVTEVRGDLSQIGY 322
           AVAS+TK L+QVS ALAATKRHLTQRIE LDGK+DEQKE+SKLIKNEV+EVR D+SQIG+
Sbjct: 133 AVASVTKQLDQVSAALAATKRHLTQRIECLDGKMDEQKEISKLIKNEVSEVREDISQIGF 192

Query: 321 DLDSLHRLVTGLDGKILSLEGKQDYANAGVYYLVNFV-GAKDEKISEYLKLMP-KPNKPR 148
           D+D++ ++V+GL+GKI+SLE KQD+ANAGV+YL  FV G KD ++ E L+  P K    R
Sbjct: 193 DIDAIQKMVSGLEGKIVSLEDKQDFANAGVWYLCQFVGGTKDARMGELLQDFPAKARLER 252

Query: 147 GYIGFPETQDSKGLKQIADTLKLVNGSATDTTVQ 46
               F E +  KGL+ IADT++  +GS   T ++
Sbjct: 253 TASTFTEDKSLKGLQYIADTIQ--SGSIEKTKIK 284



 Score = 62.4 bits (150), Expect(2) = 3e-74
 Identities = 28/54 (51%), Positives = 46/54 (85%)
 Frame = -1

Query: 959 MAMQTAGIGFTKLIILVGAGYTGTIVLKNNKLSDLLGELQSLVKGIEKTGDSSS 798
           MAMQ AG+  +K+++LVGAG TG++++++ +LSD++ ELQ L+KGI++ G+SSS
Sbjct: 1   MAMQ-AGVATSKVLVLVGAGLTGSVLIRSGRLSDIISELQGLLKGIDERGESSS 53


>ref|XP_004143471.1| PREDICTED: uncharacterized protein LOC101210112 [Cucumis sativus]
          Length = 293

 Score =  223 bits (567), Expect(2) = 1e-71
 Identities = 116/200 (58%), Positives = 145/200 (72%), Gaps = 1/200 (0%)
 Frame = -3

Query: 681 RNIGPSRQITILNGDSGWTGNMANLAVPTLALGAVGYGYMWWKGLKLSDLMYVTKKSMAT 502
           R +  SRQITILNG+SG  GN+++L VP   LGA+GYGYMWWKGL  SDLMYVTK++MA 
Sbjct: 74  RQLSSSRQITILNGNSGNIGNLSSLIVPAATLGALGYGYMWWKGLSFSDLMYVTKRNMAN 133

Query: 501 AVASMTKHLEQVSTALAATKRHLTQRIENLDGKLDEQKEMSKLIKNEVTEVRGDLSQIGY 322
           AV+++TKHLE VS ALAATKRHLTQRIENLD K+ +Q E+SKLIK +V  V+  LS I +
Sbjct: 134 AVSNLTKHLEHVSEALAATKRHLTQRIENLDDKMVKQNELSKLIKEDVAGVQKSLSDIDF 193

Query: 321 DLDSLHRLVTGLDGKILSLEGKQDYANAGVYYLVNFVGAKDEKISEYLKLMPK-PNKPRG 145
           DL  LH +V+GLDGK+  LE KQD+A  GV YL N V  K  K+ + LK   K   K +G
Sbjct: 194 DLGELHNMVSGLDGKLSQLEFKQDFATLGVMYLCNVVDGKQVKMPDTLKEQFKLSGKAQG 253

Query: 144 YIGFPETQDSKGLKQIADTL 85
            +   E+ + KGLK++ DTL
Sbjct: 254 QLMHLESPNLKGLKELTDTL 273



 Score = 74.7 bits (182), Expect(2) = 1e-71
 Identities = 37/53 (69%), Positives = 47/53 (88%)
 Frame = -1

Query: 959 MAMQTAGIGFTKLIILVGAGYTGTIVLKNNKLSDLLGELQSLVKGIEKTGDSS 801
           MAM T G+G +K++ILVGAGY+ TI+LKN KLSD+LGELQSLVKG+EK+G+ S
Sbjct: 1   MAMHT-GVGLSKILILVGAGYSTTIMLKNGKLSDVLGELQSLVKGMEKSGEQS 52


>ref|XP_002314721.1| predicted protein [Populus trichocarpa] gi|222863761|gb|EEF00892.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  219 bits (559), Expect(2) = 1e-70
 Identities = 115/221 (52%), Positives = 154/221 (69%), Gaps = 2/221 (0%)
 Frame = -3

Query: 681 RNIGPSRQITILNGDSGWTGNMANLAVPTLALGAVGYGYMWWKGLKLSDLMYVTKKSMAT 502
           R +  +RQIT+L+G+ G  GN+  L +P   LGA+GYGYMWWKGLK SDLMYVTK+SMA+
Sbjct: 74  RQLASARQITVLSGNPGQMGNLTGLIIPAATLGALGYGYMWWKGLKFSDLMYVTKRSMAS 133

Query: 501 AVASMTKHLEQVSTALAATKRHLTQRIENLDGKLDEQKEMSKLIKNEVTEVRGDLSQIGY 322
           AV+++TKHLEQVS AL+  K HLTQRI++LD K++ QKE+SK I+N+V     +L+ IG 
Sbjct: 134 AVSNLTKHLEQVSEALSTAKTHLTQRIQHLDDKMESQKEISKAIQNDVNAASENLTLIGS 193

Query: 321 DLDSLHRLVTGLDGKILSLEGKQDYANAGVYYLVNFVGAKDEKISEYLKLMPKPN-KPRG 145
           +L  L  LV+GLDGKI SLE KQD AN GV YL NFVG K  K+ + L+   KP+ + R 
Sbjct: 194 ELWQLQCLVSGLDGKIGSLEEKQDIANMGVMYLCNFVGGKKAKMPKALEDQLKPSGRTRA 253

Query: 144 YIGFPETQDSKGLKQIADTL-KLVNGSATDTTVQDNIGRMD 25
            + + E     GLK++AD L +  +  ATD T+QD    ++
Sbjct: 254 SLAYAEVPSLTGLKELADDLSQTFSKPATDATLQDGTDNLE 294



 Score = 74.7 bits (182), Expect(2) = 1e-70
 Identities = 37/53 (69%), Positives = 47/53 (88%)
 Frame = -1

Query: 959 MAMQTAGIGFTKLIILVGAGYTGTIVLKNNKLSDLLGELQSLVKGIEKTGDSS 801
           MAMQ AGIG ++++IL GAGYTGTI+LKN KLS+L+ ELQSLVKG+EK+G+ S
Sbjct: 1   MAMQ-AGIGVSRILILAGAGYTGTIMLKNGKLSELIAELQSLVKGMEKSGEKS 52


>ref|XP_002312515.1| predicted protein [Populus trichocarpa] gi|222852335|gb|EEE89882.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  223 bits (568), Expect(2) = 1e-70
 Identities = 119/225 (52%), Positives = 153/225 (68%), Gaps = 2/225 (0%)
 Frame = -3

Query: 681 RNIGPSRQITILNGDSGWTGNMANLAVPTLALGAVGYGYMWWKGLKLSDLMYVTKKSMAT 502
           R +  +RQIT+LNG+SG  GN+  L  P   LGA+GYGYMWWKGLK SD MYVTK+SMA+
Sbjct: 74  RQLASARQITVLNGNSGQMGNLTGLIAPAATLGALGYGYMWWKGLKFSDFMYVTKRSMAS 133

Query: 501 AVASMTKHLEQVSTALAATKRHLTQRIENLDGKLDEQKEMSKLIKNEVTEVRGDLSQIGY 322
           AV+++TKHLEQVS AL+  K HLTQRI+ LD K++ QKE+SK I+N+V     +L+QIG 
Sbjct: 134 AVSNLTKHLEQVSEALSTAKTHLTQRIQLLDDKMESQKEISKAIQNDVNAASENLTQIGS 193

Query: 321 DLDSLHRLVTGLDGKILSLEGKQDYANAGVYYLVNFVGAKDEKISEYLKLMPKPN-KPRG 145
           +L  L  LV+GLDGKI SLE KQD AN GV YL NFVG K  K+ + L+   KP+ + R 
Sbjct: 194 ELWQLQCLVSGLDGKIGSLEEKQDIANMGVMYLCNFVGGKKAKMPKALEDQFKPSGRTRA 253

Query: 144 YIGFPETQDSKGLKQIADTLKLVNGS-ATDTTVQDNIGRMDSCPR 13
            + + E     GLK++AD L    G  ATD  +QD    ++  PR
Sbjct: 254 SLMYSEVPSLTGLKELADDLSQTFGEPATDAILQDGTDNLEDQPR 298



 Score = 70.9 bits (172), Expect(2) = 1e-70
 Identities = 35/53 (66%), Positives = 45/53 (84%)
 Frame = -1

Query: 959 MAMQTAGIGFTKLIILVGAGYTGTIVLKNNKLSDLLGELQSLVKGIEKTGDSS 801
           MAMQ AG+  ++++IL GAGYTGTI+LKN KLS+LLGELQSL KG+ K+G+ S
Sbjct: 1   MAMQ-AGVSVSRILILAGAGYTGTIMLKNGKLSELLGELQSLTKGMGKSGEQS 52


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