BLASTX nr result
ID: Coptis23_contig00003481
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003481
(2146 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V... 763 0.0
ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|2... 727 0.0
ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [C... 714 0.0
ref|XP_002513727.1| GTP binding protein, putative [Ricinus commu... 709 0.0
ref|XP_004167322.1| PREDICTED: LOW QUALITY PROTEIN: large subuni... 690 0.0
>ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera]
Length = 597
Score = 763 bits (1969), Expect = 0.0
Identities = 393/600 (65%), Positives = 446/600 (74%), Gaps = 6/600 (1%)
Frame = +1
Query: 7 MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 186
MGKNEKTGLGRALVK HNQM+ ++ EKGR Y+NQ KKVLES+T+V D R
Sbjct: 1 MGKNEKTGLGRALVKHHNQMLQQSNEKGRFYKNQHKKVLESITDVNDIDAVIQEADEAQR 60
Query: 187 IYSTDHPAPNLPINLD---GVSEIPVEVQRQQQKMEEAEHESSLRVPRRPPWNAGMPVEE 357
+++ DHPAPN+ INLD S + E +R+QQK EEA H SSLRVPRRPPWN GM EE
Sbjct: 61 LFAFDHPAPNVLINLDTNASTSNMTDEERREQQKKEEALHASSLRVPRRPPWNVGMTAEE 120
Query: 358 LDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPL 537
LD NE+QA L+WRRSLARLE NE LVLTPFEKNLDIWRQLWRVLERSDL+VMVVDARDPL
Sbjct: 121 LDANERQALLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPL 180
Query: 538 FYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAA 717
FYRCPDLEAYA+EIDEHK+TLLLVNKADLLP ++RE+WAKYF +GILF+FWSAKAA AA
Sbjct: 181 FYRCPDLEAYAQEIDEHKKTLLLVNKADLLPFSVRERWAKYFRLHGILFIFWSAKAASAA 240
Query: 718 LEGKPLKGS-ENQSTLQNSDVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIGXXXXXXXXX 894
LEGK L E Q LQ +D DT I+GRD +
Sbjct: 241 LEGKKLNVQWETQKPLQETDDADTKIYGRDELLARLQSEAEEISVRKRKSSSSSTDSSHV 300
Query: 895 XXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 1074
GFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD
Sbjct: 301 QFHGGHVAGNSTSRSVVVGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 360
Query: 1075 ELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITL 1254
EL LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+HREAVQVVANRVPR IE+VY ITL
Sbjct: 361 ELTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITL 420
Query: 1255 PKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPP 1434
PKPKPYE Q RPPLA+E LRAYC+SRGYVASSGLPDET+AAR ILKDY+DGK+PHFE PP
Sbjct: 421 PKPKPYEQQNRPPLASEFLRAYCASRGYVASSGLPDETRAARQILKDYIDGKVPHFEMPP 480
Query: 1435 GMPNEEDQEVDTLELSTSPAYETDSSDAEN--NSATEGTSTNNLEFVLNDLESFDITNGL 1608
GM +E + D E S S +E+D+SD+EN NS +E S NLE VLNDL++FD+ NGL
Sbjct: 481 GMTDEVSEFEDPAEPSFSETHESDASDSENPPNSESESESAPNLEHVLNDLDAFDMANGL 540
Query: 1609 XXXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGPL 1788
+KQHKKPQRKK+RSWRV N+E DGMP+ +VFQKP+N+GPL
Sbjct: 541 ------ASKKAPVQKTPKAPHKQHKKPQRKKDRSWRVKNDEDDGMPVARVFQKPVNTGPL 594
>ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|222849908|gb|EEE87455.1|
predicted protein [Populus trichocarpa]
Length = 603
Score = 727 bits (1876), Expect = 0.0
Identities = 382/604 (63%), Positives = 438/604 (72%), Gaps = 9/604 (1%)
Frame = +1
Query: 7 MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 186
MGKNEKT LGRALVK HNQM+ E+KEKGR Y++Q KKVLES T+VT+
Sbjct: 1 MGKNEKTRLGRALVKHHNQMIQESKEKGRYYKSQHKKVLESFTDVTEIDAVMEQVDEGEL 60
Query: 187 IYSTD----HPAPNLPINLD---GVSEIPVEVQRQQQKMEEAEHESSLR-VPRRPPWNAG 342
S+ HP PNL INLD GVS++ E +R++QK EEA H SSLR + + PPWNAG
Sbjct: 61 FSSSSSSVHHPVPNLLINLDTGSGVSDMTAEEKREKQKKEEALHASSLRFLSKMPPWNAG 120
Query: 343 MPVEELDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVD 522
M VEELD NEKQAFL WRRSLA LEENE LVLTPFEKNLDIWRQLWRVLERSDL+VMVVD
Sbjct: 121 MSVEELDANEKQAFLTWRRSLASLEENENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVD 180
Query: 523 ARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAK 702
ARDPLFYRCPDLEAYAREIDEHK TLLLVNKADLLP ++R+KWA YF GILFLFWSAK
Sbjct: 181 ARDPLFYRCPDLEAYAREIDEHKRTLLLVNKADLLPFSVRQKWADYFRHLGILFLFWSAK 240
Query: 703 AAYAALEGKPLKGSEN-QSTLQNSDVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIGXXXX 879
AA A LEGK L+G N Q+TLQ D DT I+GRD R
Sbjct: 241 AATAVLEGKILQGPWNEQATLQEMDDPDTKIYGRDELLARLQSEAETIVRIRSKSVSSGS 300
Query: 880 XXXXXXXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQT 1059
GFVGYPNVGKSSTINALVG+KRTGVTSTPGKTKHFQT
Sbjct: 301 GPSNFQSSGGKFAGNSAPKHVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQT 360
Query: 1060 LIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEV 1239
LI+S++L LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+HREAVQVVANRVPR IE+V
Sbjct: 361 LIMSEKLTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVPRRVIEDV 420
Query: 1240 YNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPH 1419
Y I LPKPKPYE Q+RPPLA+ELLR YC+SRGYV SSGLPDET+AAR ILKDY+DGKL H
Sbjct: 421 YKINLPKPKPYEPQSRPPLASELLRTYCASRGYVGSSGLPDETRAARQILKDYIDGKLTH 480
Query: 1420 FEFPPGMPNEEDQEVDTLELSTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDIT 1599
E PPG+ +EE + D S S +++DSSD EN + +G +T LE VL+DL SFD+
Sbjct: 481 HEIPPGISDEEGSDQDDAGSSLSETHQSDSSDTENPAENDGKNTPALEHVLDDLNSFDMA 540
Query: 1600 NGLXXXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINS 1779
NGL S+K HKKPQ+KK+RSWR+ N+ DGMP+++VFQK +N+
Sbjct: 541 NGL---AHKKVTVKKPSASASASHKHHKKPQKKKDRSWRIENDGGDGMPVVRVFQKSVNT 597
Query: 1780 GPLK 1791
GPLK
Sbjct: 598 GPLK 601
>ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus]
Length = 588
Score = 714 bits (1844), Expect = 0.0
Identities = 374/601 (62%), Positives = 438/601 (72%), Gaps = 5/601 (0%)
Frame = +1
Query: 7 MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 186
M +N+K GLGRALVKQHNQM+ ++KEKGR Y++Q KKVLESVTEV+D R
Sbjct: 1 MRRNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER 60
Query: 187 IYSTDHPAPNLPINLDG---VSEIPVEVQRQQQKMEEAEHESSLRVPRRPPWNAGMPVEE 357
++S D+P PN INLDG VSE+ + +R QQK+EEA H SSLRVPRRPPWNA M EE
Sbjct: 61 LFSIDNPTPNFLINLDGSSSVSEMTLVERRDQQKIEEALHASSLRVPRRPPWNARMSAEE 120
Query: 358 LDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPL 537
LD+NE+Q+FL+WRRSLARLE NE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDARDPL
Sbjct: 121 LDDNERQSFLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDPL 180
Query: 538 FYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAA 717
FYRCPDLEAYARE+D+HK T+LLVNKADLLP ++R+KWA++F+ + IL+LFWSAKAA A
Sbjct: 181 FYRCPDLEAYAREVDQHKRTMLLVNKADLLPYSVRKKWAEFFNQHEILYLFWSAKAASAT 240
Query: 718 LEGKPLKGSENQSTLQNS-DVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIGXXXXXXXXX 894
LEG+ L N + QN D DT I+ RD R +
Sbjct: 241 LEGRKLGSGWNTNEPQNGVDDPDTKIYARDELLSRLQYEAERIVERRAS-------SRSD 293
Query: 895 XXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISD 1074
GFVGYPNVGKSSTINALVG+KR GVTSTPGKTKHFQTLIISD
Sbjct: 294 NLSLEGCMNEKSSGSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISD 353
Query: 1075 ELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITL 1254
+L LCDCPGLVFPSF++SRYEM+A GVLPIDRMT+HREAVQVVANRVPR IE+VY ITL
Sbjct: 354 KLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITL 413
Query: 1255 PKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPP 1434
PKPKPYE Q+RPPLA+ELL+AYC SRGYVASSGLPDET+A+R ILKDY+DGK+PH E PP
Sbjct: 414 PKPKPYEPQSRPPLASELLKAYCVSRGYVASSGLPDETRASRQILKDYVDGKIPHHELPP 473
Query: 1435 GMPNEED-QEVDTLELSTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDITNGLX 1611
GM E+ QE D S +++DS D E +S +G S E V++ L+SFDI NGL
Sbjct: 474 GMLKEDHIQEEDARSFELSDTHDSDSDDVE-DSNMDGESAPGFEQVVDYLDSFDIANGL- 531
Query: 1612 XXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGPLK 1791
S+KQHKKPQRKK+RSWRVGN+ DGMP ++V QKPINSG LK
Sbjct: 532 ------AKPSITEKKPKASHKQHKKPQRKKDRSWRVGNDGGDGMPAVRVLQKPINSGTLK 585
Query: 1792 A 1794
A
Sbjct: 586 A 586
>ref|XP_002513727.1| GTP binding protein, putative [Ricinus communis]
gi|223547178|gb|EEF48674.1| GTP binding protein, putative
[Ricinus communis]
Length = 596
Score = 709 bits (1830), Expect = 0.0
Identities = 377/603 (62%), Positives = 434/603 (71%), Gaps = 7/603 (1%)
Frame = +1
Query: 7 MGKNEKTGLGRALVKQHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXR 186
MGKNEKT LGRALVK HNQM+ ++KEKGR Y + KKVLESVTEV+D
Sbjct: 1 MGKNEKTKLGRALVKHHNQMIQQSKEKGRYYNSLHKKVLESVTEVSDIDAVIEQAEEADL 60
Query: 187 IYSTDHPA--PNLPINLD----GVSEIPVEVQRQQQKMEEAEHESSLRVPRRPPWNAGMP 348
++S PA PN PI+LD G+S++ + +R+QQK EEA H SSLRVPRRPPWNA M
Sbjct: 61 LFSHQLPAAAPNQPISLDVSSSGISDMTPKERREQQKKEEALHASSLRVPRRPPWNAEMS 120
Query: 349 VEELDNNEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDAR 528
+EELD+NEK AFL WRR+LA LEENEKLVLTPFEKNLDIWRQLWRV+ERSDL+VMVVDAR
Sbjct: 121 IEELDDNEKHAFLTWRRTLASLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDAR 180
Query: 529 DPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAA 708
DPLFYRCPDLEAYA+E+D+HK TLLLVNKADLLP ++R+KWA+YF + ILF+FWSAK A
Sbjct: 181 DPLFYRCPDLEAYAQEVDKHKRTLLLVNKADLLPFSVRQKWAEYFCHHEILFVFWSAKVA 240
Query: 709 YAALEGKPLKGSEN-QSTLQNSDVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIGXXXXXX 885
AALEGK LK N Q TLQ D DT I+ RD R
Sbjct: 241 TAALEGKKLKEPLNGQDTLQKMDDPDTKIYDRDELLSRLQSEAEQIAKLRRKSNCSGTGS 300
Query: 886 XXXXXXXXXXXXXXXXXXXXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLI 1065
GFVGYPNVGKSSTINAL G+KRTGVTSTPGKTKHFQTLI
Sbjct: 301 SNDQSLGGNLAGNSTLKNVVVGFVGYPNVGKSSTINALAGQKRTGVTSTPGKTKHFQTLI 360
Query: 1066 ISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYN 1245
IS+EL LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+HREAVQVVANRV R IE+VY
Sbjct: 361 ISEELTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVARHIIEDVYK 420
Query: 1246 ITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFE 1425
I LPKPKPYE Q+RPPLA+E LRAYC+SRGYVASSGLPDET+AAR ILKDYLDGKLPH+E
Sbjct: 421 INLPKPKPYEPQSRPPLASEFLRAYCASRGYVASSGLPDETRAARQILKDYLDGKLPHYE 480
Query: 1426 FPPGMPNEEDQEVDTLELSTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDITNG 1605
PP M EE + S S ETDSSD EN + E + NLE VL+DL+SFD+ NG
Sbjct: 481 MPPRMSAEEPSAENDGGPSLSETNETDSSDIENPTDQEENAL-NLEQVLDDLKSFDMANG 539
Query: 1606 LXXXXXXXXXXXXXXXXXXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGP 1785
L S K H+KP+RKK+RSWR N++ DGMPI++VFQKP+N+ P
Sbjct: 540 L-------TSKKVIVKKSNASNKHHRKPKRKKDRSWRSKNDDGDGMPIIRVFQKPVNASP 592
Query: 1786 LKA 1794
+A
Sbjct: 593 SQA 595
>ref|XP_004167322.1| PREDICTED: LOW QUALITY PROTEIN: large subunit GTPase 1 homolog,
partial [Cucumis sativus]
Length = 573
Score = 690 bits (1780), Expect = 0.0
Identities = 362/586 (61%), Positives = 423/586 (72%), Gaps = 5/586 (0%)
Frame = +1
Query: 52 QHNQMVIETKEKGRVYRNQSKKVLESVTEVTDXXXXXXXXXXXXRIYSTDHPAPNLPINL 231
QHNQM+ ++KEKGR Y++Q KKVLESVTEV+D R++S D+P PN INL
Sbjct: 1 QHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAERLFSIDNPTPNFLINL 60
Query: 232 DG---VSEIPVEVQRQQQKMEEAEHESSLRVPRRPPWNAGMPVEELDNNEKQAFLVWRRS 402
DG VSE+ + +R QQK+EEA H SSLRVPRRPPWNA M EELD+NE+Q+FL+WRRS
Sbjct: 61 DGSSSVSEMTLVERRDQQKIEEALHASSLRVPRRPPWNARMSAEELDDNERQSFLIWRRS 120
Query: 403 LARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREID 582
LARLE NE LVLTPFEKNLDIWRQLWRV+ER DL+VMVVDARDPLFYRCPDLEAYARE+D
Sbjct: 121 LARLEGNENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDPLFYRCPDLEAYAREVD 180
Query: 583 EHKETLLLVNKADLLPLALREKWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSENQSTL 762
+HK T+LLVNKADLLP ++R+KWA++F+ + IL+LFWSAKAA A LEG+ L N +
Sbjct: 181 QHKRTMLLVNKADLLPYSVRKKWAEFFNQHEILYLFWSAKAASATLEGRKLGSGWNTNEP 240
Query: 763 QNS-DVTDTNIFGRDXXXXXXXXXXXXXXXTRGNIGXXXXXXXXXXXXXXXXXXXXXXXX 939
QN D DT I+ RD R +
Sbjct: 241 QNGVDDPDTKIYARDELLSRLQYEAERIVERRAS-------SRSDNLSLEGCMNEKSSGS 293
Query: 940 XXXGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSF 1119
GFVGYPNVGKSSTINALVG KR GVTSTPGKTKHFQTLIISD+L LCDCPGLVFPSF
Sbjct: 294 VMVGFVGYPNVGKSSTINALVGXKRAGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSF 353
Query: 1120 TTSRYEMVASGVLPIDRMTQHREAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLA 1299
++SRYEM+A GVLPIDRMT+HREAVQVVANRVPR IE+VY ITLPKPKPYE Q+RPPLA
Sbjct: 354 SSSRYEMIAYGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKITLPKPKPYEPQSRPPLA 413
Query: 1300 AELLRAYCSSRGYVASSGLPDETKAARLILKDYLDGKLPHFEFPPGMPNEED-QEVDTLE 1476
+ELL+AYC SRGYVASSGLPDET+A+R ILKDY+DGK+PH E PPGM E+ QE D
Sbjct: 414 SELLKAYCVSRGYVASSGLPDETRASRQILKDYVDGKIPHHELPPGMLKEDHIQEEDARS 473
Query: 1477 LSTSPAYETDSSDAENNSATEGTSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXX 1656
S +++DS D E +S +G S E V++ L+SFDI NGL
Sbjct: 474 FELSDTHDSDSDDVE-DSNMDGESAPGFEQVVDYLDSFDIANGL-------AKPSITEKK 525
Query: 1657 XXXSYKQHKKPQRKKNRSWRVGNEETDGMPILKVFQKPINSGPLKA 1794
S+KQHKKPQ KK+RSWRVGN+ DGMP ++V QKPINSG LKA
Sbjct: 526 PKASHKQHKKPQXKKDRSWRVGNDGGDGMPAVRVLQKPINSGTLKA 571