BLASTX nr result
ID: Coptis23_contig00003477
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003477
(1574 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P25248.1|ACEA_BRANA RecName: Full=Isocitrate lyase; Short=ICL... 178 1e-55
emb|CAA73792.1| glyoxysomal isocitrate lyase [Brassica napus] 178 1e-55
ref|NP_001233878.1| isocitrate lyase [Solanum lycopersicum] gi|1... 178 2e-55
ref|XP_004151880.1| PREDICTED: isocitrate lyase-like [Cucumis sa... 182 3e-55
ref|XP_004158557.1| PREDICTED: isocitrate lyase-like [Cucumis sa... 182 3e-55
>sp|P25248.1|ACEA_BRANA RecName: Full=Isocitrate lyase; Short=ICL; Short=Isocitrase;
Short=Isocitratase gi|167144|gb|AAA32992.1| isocitrate
lyase [Brassica napus] gi|255220|gb|AAB23208.1|
isocitrate lyase, threo-D S-isocitrate glyoxylate-lyase,
IL {EC 4.1.3.1} [Brassica napus, seedlings, Peptide, 576
aa] gi|447142|prf||1913424A isocitrate lyase
Length = 576
Score = 178 bits (451), Expect(3) = 1e-55
Identities = 86/105 (81%), Positives = 98/105 (93%), Gaps = 1/105 (0%)
Frame = -2
Query: 1438 SVAGFHADALVIDTFAKDYAQRGMLAYVDKIQREERNNGVDTLAHQKWSGANYYDRVLKT 1259
++AGFHADALV+DTFAKDYA+RGMLAYV++IQREER+NGVDTLAHQKWSGANYYDR LKT
Sbjct: 472 TLAGFHADALVVDTFAKDYARRGMLAYVERIQREERSNGVDTLAHQKWSGANYYDRYLKT 531
Query: 1258 VQGGISSTASMGKGVTEEQFKETWTRKGTMDVSEG-NIVVAKARM 1127
VQGGISSTA+MGKGVTEEQFKETWTR G + EG ++VVAK+RM
Sbjct: 532 VQGGISSTAAMGKGVTEEQFKETWTRPGAAGMGEGTSLVVAKSRM 576
Score = 56.6 bits (135), Expect(3) = 1e-55
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -3
Query: 1572 ELTNFSEGVRSKRPETMLAYNLSPSFNWDAS 1480
E T F+EGV+SK PE MLAYNLSPSFNWDAS
Sbjct: 417 ECTQFAEGVKSKTPEVMLAYNLSPSFNWDAS 447
Score = 30.8 bits (68), Expect(3) = 1e-55
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 1478 QMMAFIPRIAKLGFC 1434
QMM FIPRIA+LG+C
Sbjct: 453 QMMEFIPRIARLGYC 467
>emb|CAA73792.1| glyoxysomal isocitrate lyase [Brassica napus]
Length = 576
Score = 178 bits (451), Expect(3) = 1e-55
Identities = 86/105 (81%), Positives = 98/105 (93%), Gaps = 1/105 (0%)
Frame = -2
Query: 1438 SVAGFHADALVIDTFAKDYAQRGMLAYVDKIQREERNNGVDTLAHQKWSGANYYDRVLKT 1259
++AGFHADALV+DTFAKDYA+RGMLAYV++IQREER+NGVDTLAHQKWSGANYYDR LKT
Sbjct: 472 TLAGFHADALVVDTFAKDYARRGMLAYVERIQREERSNGVDTLAHQKWSGANYYDRYLKT 531
Query: 1258 VQGGISSTASMGKGVTEEQFKETWTRKGTMDVSEG-NIVVAKARM 1127
VQGGISSTA+MGKGVTEEQFKETWTR G + EG ++VVAK+RM
Sbjct: 532 VQGGISSTAAMGKGVTEEQFKETWTRPGAAGMGEGTSLVVAKSRM 576
Score = 56.6 bits (135), Expect(3) = 1e-55
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -3
Query: 1572 ELTNFSEGVRSKRPETMLAYNLSPSFNWDAS 1480
E T F+EGV+SK PE MLAYNLSPSFNWDAS
Sbjct: 417 ECTQFAEGVKSKTPEVMLAYNLSPSFNWDAS 447
Score = 30.8 bits (68), Expect(3) = 1e-55
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 1478 QMMAFIPRIAKLGFC 1434
QMM FIPRIA+LG+C
Sbjct: 453 QMMEFIPRIARLGYC 467
>ref|NP_001233878.1| isocitrate lyase [Solanum lycopersicum]
gi|1351841|sp|P49297.1|ACEA_SOLLC RecName:
Full=Isocitrate lyase; Short=ICL; Short=Isocitrase;
Short=Isocitratase gi|624211|gb|AAA82738.1| isocitrate
lyase [Solanum lycopersicum]
Length = 575
Score = 178 bits (452), Expect(3) = 2e-55
Identities = 81/104 (77%), Positives = 99/104 (95%)
Frame = -2
Query: 1438 SVAGFHADALVIDTFAKDYAQRGMLAYVDKIQREERNNGVDTLAHQKWSGANYYDRVLKT 1259
++AGFHADAL++DTFAKD+A+RGMLAYV+KIQREER+NGVDTLAHQKWSGANYYDRVL+T
Sbjct: 472 TLAGFHADALIVDTFAKDFARRGMLAYVEKIQREERSNGVDTLAHQKWSGANYYDRVLRT 531
Query: 1258 VQGGISSTASMGKGVTEEQFKETWTRKGTMDVSEGNIVVAKARM 1127
VQGGI+STA+MGKGVTEEQF+E WTR G ++ +G++V+AKARM
Sbjct: 532 VQGGITSTAAMGKGVTEEQFEEKWTRTGATNLGDGSVVIAKARM 575
Score = 54.7 bits (130), Expect(3) = 2e-55
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = -3
Query: 1572 ELTNFSEGVRSKRPETMLAYNLSPSFNWDAS 1480
E T FS+GV++ RPE MLAYNLSPSFNWDAS
Sbjct: 417 ECTKFSQGVKTLRPELMLAYNLSPSFNWDAS 447
Score = 31.6 bits (70), Expect(3) = 2e-55
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1
Query: 1478 QMMAFIPRIAKLGFC 1434
QMM FIPRIAKLG+C
Sbjct: 453 QMMDFIPRIAKLGYC 467
>ref|XP_004151880.1| PREDICTED: isocitrate lyase-like [Cucumis sativus]
Length = 576
Score = 182 bits (461), Expect(3) = 3e-55
Identities = 86/105 (81%), Positives = 101/105 (96%), Gaps = 1/105 (0%)
Frame = -2
Query: 1438 SVAGFHADALVIDTFAKDYAQRGMLAYVDKIQREERNNGVDTLAHQKWSGANYYDRVLKT 1259
++AGFHADALV+DTFA+DYA+RGMLAYV++IQREERNNGVDTLAHQKWSGANYYDR LKT
Sbjct: 472 TLAGFHADALVVDTFARDYARRGMLAYVERIQREERNNGVDTLAHQKWSGANYYDRYLKT 531
Query: 1258 VQGGISSTASMGKGVTEEQFKETWTRKGTMDV-SEGNIVVAKARM 1127
VQGGISSTA+MGKGVTEEQFKE+WTR+G +++ EGN+VVAK+RM
Sbjct: 532 VQGGISSTAAMGKGVTEEQFKESWTREGAVNLGEEGNVVVAKSRM 576
Score = 53.1 bits (126), Expect(3) = 3e-55
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -3
Query: 1572 ELTNFSEGVRSKRPETMLAYNLSPSFNWDAS 1480
E T F++G++S PETMLAYNLSPSFNWDAS
Sbjct: 417 ECTTFAKGMKSIHPETMLAYNLSPSFNWDAS 447
Score = 29.3 bits (64), Expect(3) = 3e-55
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1
Query: 1478 QMMAFIPRIAKLGFC 1434
QM FIPRIA+LGFC
Sbjct: 453 QMEEFIPRIARLGFC 467
>ref|XP_004158557.1| PREDICTED: isocitrate lyase-like [Cucumis sativus]
gi|1351840|sp|P49296.1|ACEA_CUCSA RecName:
Full=Isocitrate lyase; Short=ICL; Short=Isocitrase;
Short=Isocitratase gi|1052578|emb|CAA84632.1| isocitrate
lyase [Cucumis sativus]
Length = 576
Score = 182 bits (461), Expect(3) = 3e-55
Identities = 86/105 (81%), Positives = 101/105 (96%), Gaps = 1/105 (0%)
Frame = -2
Query: 1438 SVAGFHADALVIDTFAKDYAQRGMLAYVDKIQREERNNGVDTLAHQKWSGANYYDRVLKT 1259
++AGFHADALV+DTFA+DYA+RGMLAYV++IQREERNNGVDTLAHQKWSGANYYDR LKT
Sbjct: 472 TLAGFHADALVVDTFARDYARRGMLAYVERIQREERNNGVDTLAHQKWSGANYYDRYLKT 531
Query: 1258 VQGGISSTASMGKGVTEEQFKETWTRKGTMDV-SEGNIVVAKARM 1127
VQGGISSTA+MGKGVTEEQFKE+WTR+G +++ EGN+VVAK+RM
Sbjct: 532 VQGGISSTAAMGKGVTEEQFKESWTREGAVNLGEEGNVVVAKSRM 576
Score = 53.1 bits (126), Expect(3) = 3e-55
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -3
Query: 1572 ELTNFSEGVRSKRPETMLAYNLSPSFNWDAS 1480
E T F++G++S PETMLAYNLSPSFNWDAS
Sbjct: 417 ECTTFAKGMKSIHPETMLAYNLSPSFNWDAS 447
Score = 29.3 bits (64), Expect(3) = 3e-55
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1
Query: 1478 QMMAFIPRIAKLGFC 1434
QM FIPRIA+LGFC
Sbjct: 453 QMEEFIPRIARLGFC 467