BLASTX nr result

ID: Coptis23_contig00003475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003475
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27985.3| unnamed protein product [Vitis vinifera]              135   7e-30
ref|XP_002280262.1| PREDICTED: uncharacterized protein LOC100249...   135   7e-30
ref|XP_002514205.1| conserved hypothetical protein [Ricinus comm...   124   3e-26
ref|XP_002275139.1| PREDICTED: uncharacterized protein LOC100243...   122   1e-25
gb|ACF32436.1| unknown [Elaeis guineensis]                            120   2e-25

>emb|CBI27985.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score =  135 bits (341), Expect = 7e-30
 Identities = 74/115 (64%), Positives = 85/115 (73%)
 Frame = -1

Query: 432 INRGPLYELSELMAQLPIKRGLSNHFQGKSQSFTSLSNVNCIEDLAKKENPYRKRMKSCK 253
           ++ GPLYELSELMAQLPIKRGLS +FQGKSQSFTSL++V  +EDLAKK  P RK+MKSCK
Sbjct: 44  LSNGPLYELSELMAQLPIKRGLSKYFQGKSQSFTSLASVKSLEDLAKKGTPSRKKMKSCK 103

Query: 252 SYGGLDATTNKSYAPKACSKIISKKVSRGSFLSSQGKRSSLNNSPRSPFSLQKDF 88
           SYGG     +K Y PKA    ISKK SRGS LSS G+R  +    R P  LQK+F
Sbjct: 104 SYGG-GLDVHKLYTPKA---TISKKASRGSLLSSLGRRGVIMGGCRPPSPLQKNF 154


>ref|XP_002280262.1| PREDICTED: uncharacterized protein LOC100249186 [Vitis vinifera]
          Length = 184

 Score =  135 bits (341), Expect = 7e-30
 Identities = 74/115 (64%), Positives = 85/115 (73%)
 Frame = -1

Query: 432 INRGPLYELSELMAQLPIKRGLSNHFQGKSQSFTSLSNVNCIEDLAKKENPYRKRMKSCK 253
           ++ GPLYELSELMAQLPIKRGLS +FQGKSQSFTSL++V  +EDLAKK  P RK+MKSCK
Sbjct: 74  LSNGPLYELSELMAQLPIKRGLSKYFQGKSQSFTSLASVKSLEDLAKKGTPSRKKMKSCK 133

Query: 252 SYGGLDATTNKSYAPKACSKIISKKVSRGSFLSSQGKRSSLNNSPRSPFSLQKDF 88
           SYGG     +K Y PKA    ISKK SRGS LSS G+R  +    R P  LQK+F
Sbjct: 134 SYGG-GLDVHKLYTPKA---TISKKASRGSLLSSLGRRGVIMGGCRPPSPLQKNF 184


>ref|XP_002514205.1| conserved hypothetical protein [Ricinus communis]
           gi|223546661|gb|EEF48159.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score =  124 bits (310), Expect = 3e-26
 Identities = 69/99 (69%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
 Frame = -1

Query: 429 NRGPLYELSELMAQLPIKRGLSNHFQGKSQSFTSLSNVNCIEDLAKKENPY--RKRMKSC 256
           N GPLYELSELMAQLPIKRGLS  ++GKSQS+TSL++V  IEDLAKK  PY  R ++KSC
Sbjct: 86  NDGPLYELSELMAQLPIKRGLSKFYKGKSQSYTSLASVKSIEDLAKKVRPYNSRSKLKSC 145

Query: 255 KSYGGLDATTNKSYAPKACSKIISKKVSRGSFLSSQGKR 139
           KSY  LDA  +KS++PKA    ISKK SRGSFLSS GKR
Sbjct: 146 KSYAVLDA--HKSFSPKA---TISKKASRGSFLSSSGKR 179


>ref|XP_002275139.1| PREDICTED: uncharacterized protein LOC100243997 [Vitis vinifera]
           gi|296081587|emb|CBI20592.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score =  122 bits (305), Expect = 1e-25
 Identities = 67/106 (63%), Positives = 78/106 (73%)
 Frame = -1

Query: 435 LINRGPLYELSELMAQLPIKRGLSNHFQGKSQSFTSLSNVNCIEDLAKKENPYRKRMKSC 256
           L+N GPLYELS+LMA LPIKRGLS +FQGKS+SFTSLSNV+CIEDLA++E P R+RMKSC
Sbjct: 82  LVN-GPLYELSDLMAILPIKRGLSKYFQGKSKSFTSLSNVSCIEDLARRETPLRRRMKSC 140

Query: 255 KSYGGLDATTNKSYAPKACSKIISKKVSRGSFLSSQGKRSSLNNSP 118
           KSYGG       SYAPK    I+ KK ++GSF S Q  R      P
Sbjct: 141 KSYGGGLDIHKSSYAPK---PILLKKSAKGSFPSLQAIRGGCRPPP 183


>gb|ACF32436.1| unknown [Elaeis guineensis]
          Length = 177

 Score =  120 bits (302), Expect = 2e-25
 Identities = 61/96 (63%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
 Frame = -1

Query: 423 GPLYELSELMAQLPIKRGLSNHFQGKSQSFTSLSNVNCIEDLAKKENPYRKRMKSCKSY- 247
           GPLY+LS L AQLP KRGLS ++QGKSQSFTSLS+V C++DL KKE P+R++MKSCKSY 
Sbjct: 65  GPLYDLSSLTAQLPSKRGLSKYYQGKSQSFTSLSDVRCLQDLPKKETPFRRKMKSCKSYA 124

Query: 246 GGLDATTNKSYAPKACSKIISKKVSRGSFLSSQGKR 139
           GGLD +T  + AP    K  SKK SRGS  SS  K+
Sbjct: 125 GGLDGSTESNQAPATSRKTRSKKASRGSCASSDCKQ 160


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