BLASTX nr result

ID: Coptis23_contig00003474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003474
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA71199.1| omega-6 desaturase [Gossypium hirsutum]               140   1e-31
gb|AAF80560.1|AF192486_1 omega-6 fatty acid desaturase [Sesamum ...   140   1e-31
gb|AAL37484.1|AF331163_1 delta-12 fatty acid desaturase [Gossypi...   139   2e-31
gb|ABA41034.1| delta12-fatty acid desaturase [Jatropha curcas]        139   3e-31
gb|AEW43690.1| fatty acid desaturase 2 [Jatropha curcas]              139   3e-31

>emb|CAA71199.1| omega-6 desaturase [Gossypium hirsutum]
          Length = 383

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/90 (70%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
 Frame = -2

Query: 266 MGAGGRMSVST--KKDEKEGIQRVPYAKPPFTLGELKKVIPPHCFQRSVIRSFSYVVYDF 93
           MGAGGRMSV T  KK E   ++RVPY+KPPFTL E+KK IPPHCFQRSV+RSFSY++YDF
Sbjct: 1   MGAGGRMSVPTSPKKPEFNSLKRVPYSKPPFTLSEIKKAIPPHCFQRSVLRSFSYLLYDF 60

Query: 92  IIVSLLYHIATTYFSLLPQPLSSIAWPIYW 3
           I+ SL YH+AT YF  LPQ LS++AWP+YW
Sbjct: 61  ILASLFYHVATNYFPNLPQALSNVAWPLYW 90


>gb|AAF80560.1|AF192486_1 omega-6 fatty acid desaturase [Sesamum indicum]
           gi|59896214|gb|AAX11454.1| microsomal oleic acid
           desaturase [Sesamum indicum]
          Length = 383

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/90 (73%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = -2

Query: 266 MGAGGRMSVSTKKDE--KEGIQRVPYAKPPFTLGELKKVIPPHCFQRSVIRSFSYVVYDF 93
           MGAGGRMS  T KDE  K  +QRVPYAKPPFTLG++KK IPPHCF+RSV RSFSYVVYD 
Sbjct: 1   MGAGGRMSDPTTKDEQKKNPLQRVPYAKPPFTLGDIKKAIPPHCFERSVSRSFSYVVYDL 60

Query: 92  IIVSLLYHIATTYFSLLPQPLSSIAWPIYW 3
           +IV LLY+IAT+YF LLP P   +AWPIYW
Sbjct: 61  VIVFLLYYIATSYFHLLPSPYCYLAWPIYW 90


>gb|AAL37484.1|AF331163_1 delta-12 fatty acid desaturase [Gossypium hirsutum]
          Length = 384

 Score =  139 bits (351), Expect = 2e-31
 Identities = 64/90 (71%), Positives = 76/90 (84%), Gaps = 2/90 (2%)
 Frame = -2

Query: 266 MGAGGRMSV--STKKDEKEGIQRVPYAKPPFTLGELKKVIPPHCFQRSVIRSFSYVVYDF 93
           MGAGGRMSV  S +K E   ++RVP +KPPFTL E+KK IPPHCFQRS+IRSFSY+VYDF
Sbjct: 1   MGAGGRMSVPPSQRKQESGSMKRVPISKPPFTLSEIKKAIPPHCFQRSLIRSFSYLVYDF 60

Query: 92  IIVSLLYHIATTYFSLLPQPLSSIAWPIYW 3
           I+VS+ Y++ATTYF  LPQPLS +AWPIYW
Sbjct: 61  ILVSIFYYVATTYFHNLPQPLSFVAWPIYW 90


>gb|ABA41034.1| delta12-fatty acid desaturase [Jatropha curcas]
          Length = 383

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
 Frame = -2

Query: 266 MGAGGRMSV--STKKDEKEGIQRVPYAKPPFTLGELKKVIPPHCFQRSVIRSFSYVVYDF 93
           MGAGGRMSV  S KK E E ++RVPY+KPPFTLG++KK IPPHCFQRSV+RSFSYVVYD 
Sbjct: 1   MGAGGRMSVPPSPKKLEAEVLKRVPYSKPPFTLGQVKKAIPPHCFQRSVLRSFSYVVYDL 60

Query: 92  IIVSLLYHIATTYFSLLPQPLSSIAWPIYW 3
            +  + Y++AT YF LLPQPLS +AWPIYW
Sbjct: 61  TLAFIFYYVATNYFHLLPQPLSYVAWPIYW 90


>gb|AEW43690.1| fatty acid desaturase 2 [Jatropha curcas]
          Length = 383

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
 Frame = -2

Query: 266 MGAGGRMSV--STKKDEKEGIQRVPYAKPPFTLGELKKVIPPHCFQRSVIRSFSYVVYDF 93
           MGAGGRMSV  S KK E E ++RVPY+KPPFTLG++KK IPPHCFQRSV+RSFSYVVYD 
Sbjct: 1   MGAGGRMSVPPSPKKLEAEVLKRVPYSKPPFTLGQVKKAIPPHCFQRSVLRSFSYVVYDL 60

Query: 92  IIVSLLYHIATTYFSLLPQPLSSIAWPIYW 3
            +  + Y++AT YF LLPQPLS +AWPIYW
Sbjct: 61  TLAFIFYYVATNYFHLLPQPLSYVAWPIYW 90


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