BLASTX nr result

ID: Coptis23_contig00003472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003472
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15253.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7...    83   3e-14
ref|XP_004138156.1| PREDICTED: ABC transporter A family member 7...    80   1e-13
ref|XP_002875865.1| hypothetical protein ARALYDRAFT_485140 [Arab...    78   7e-13
ref|XP_002330092.1| ABC transporter family, cholesterol/phosphol...    78   7e-13

>emb|CBI15253.3| unnamed protein product [Vitis vinifera]
          Length = 928

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/53 (79%), Positives = 46/53 (86%)
 Frame = -2

Query: 219  TQKFELPKKVVRIADVFQAVENAKTKFPVHAWGLADTSLEDVFIKVAGRE*AF 61
            TQKFELPK+ VRIADVFQAVENAK++F V AWGLADT+LEDVFIKVA    AF
Sbjct: 872  TQKFELPKQEVRIADVFQAVENAKSRFTVQAWGLADTTLEDVFIKVARGAQAF 924


>ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7 [Vitis vinifera]
          Length = 949

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/53 (79%), Positives = 46/53 (86%)
 Frame = -2

Query: 219  TQKFELPKKVVRIADVFQAVENAKTKFPVHAWGLADTSLEDVFIKVAGRE*AF 61
            TQKFELPK+ VRIADVFQAVENAK++F V AWGLADT+LEDVFIKVA    AF
Sbjct: 893  TQKFELPKQEVRIADVFQAVENAKSRFTVQAWGLADTTLEDVFIKVARGAQAF 945


>ref|XP_004138156.1| PREDICTED: ABC transporter A family member 7-like [Cucumis sativus]
            gi|449477292|ref|XP_004154983.1| PREDICTED: ABC
            transporter A family member 7-like [Cucumis sativus]
          Length = 947

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/47 (82%), Positives = 43/47 (91%)
 Frame = -2

Query: 219  TQKFELPKKVVRIADVFQAVENAKTKFPVHAWGLADTSLEDVFIKVA 79
            TQKFELPK+ VRI DVFQAVENAK++F V AWGLADT+LEDVFIKVA
Sbjct: 891  TQKFELPKQEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVA 937


>ref|XP_002875865.1| hypothetical protein ARALYDRAFT_485140 [Arabidopsis lyrata subsp.
           lyrata] gi|297321703|gb|EFH52124.1| hypothetical protein
           ARALYDRAFT_485140 [Arabidopsis lyrata subsp. lyrata]
          Length = 902

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -2

Query: 219 TQKFELPKKVVRIADVFQAVENAKTKFPVHAWGLADTSLEDVFIKVA 79
           TQKFELPK+ V+I +VFQAVE AKT FPV AWGLADT+LEDVFIKVA
Sbjct: 853 TQKFELPKQEVKIGEVFQAVEKAKTMFPVVAWGLADTTLEDVFIKVA 899


>ref|XP_002330092.1| ABC transporter family, cholesterol/phospholipid flippase [Populus
           trichocarpa] gi|222871226|gb|EEF08357.1| ABC transporter
           family, cholesterol/phospholipid flippase [Populus
           trichocarpa]
          Length = 911

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/47 (76%), Positives = 44/47 (93%)
 Frame = -2

Query: 219 TQKFELPKKVVRIADVFQAVENAKTKFPVHAWGLADTSLEDVFIKVA 79
           TQKFE+PK+ + IADVFQAVE AK++FPV+AWGL+DT+LEDVFIKVA
Sbjct: 855 TQKFEMPKEEISIADVFQAVEVAKSRFPVYAWGLSDTTLEDVFIKVA 901


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